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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1914 |
| Cds size | 1173 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10176.129.1 >prot_S-dermatodea_contig10176.129.1 ID=prot_S-dermatodea_contig10176.129.1|Name=mRNA_S-dermatodea_contig10176.129.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=391bp
MVNVKRKRCASYSCSETPSFGTGGSKETEFCSEHNRAGMVDGLKKRCTSE
GCVEYAVYGQDGSRRPSLLLSRRFTESHHAGASAVEAAKATQEAKEVEEG
AGVQAALPNTRERPLRVERFPRQMNKTFENLECGPSSGKRMRVLEREKRD
PSKKAQQVSAVVQKSSPNRSPTGCTPLAPQDSSDQSRAAHNLRQVDGATS
REPKRCTLSGCGRDDVRDLPIDSFVAPAKPAQLIPAQGIARTDTGEGEVT
ESTGITASVDRALARCGGCERDDAGNGDALITSRFAGAKRNVSTTSRLGL
RRIRKSSASDLQDLRNIASLKKGKRRARVESQTRGMVDTIAPAPVDVMVE
EGDADDHMGLDELYYGGAGEGAVSPMAALDVFTVWIKPEG* back to topmRNA from alignment at S-dermatodea_contig10176:510..7999- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig10176.129.1 ID=mRNA_S-dermatodea_contig10176.129.1|Name=mRNA_S-dermatodea_contig10176.129.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=7490bp|location=Sequence derived from alignment at S-dermatodea_contig10176:510..7999- (Saccorhiza dermatodea SderLu1190fm monoicous)
CGGAGGGCAGCAAGAAGAAGGAGTTCTGCAGCGAACACAAGAGGGCGGGT
ATGGTTAACGTCAAGAGAAAACGGTGTGCCTCCTATTCTTGTTCCGAGAC
CCCGTCGTTCGGGACGGGGGGAAGCAAGGAGACGGAGTTCTGCAGCGAAC
ACAATAGGGCTGGTATGGTTGATGGTTTGAAGAAACGGTGCACGAGCGAG
GGTTGCGTTGAGTACGCAGTGTACGGTCAGGATGGCAGCAGACGACCCAG
CTTGCTACTCTCTCGACGCTTCACGGAGAGCCATCATGGTAAGCACGTTG
ATGTACAGGCGTCATCTACAAATGCCTTCCAGTGGTGCAAGGCGATGGTG
TGCGAATGCATGTGAAACACCCGGCTTGTGAGTTCCGTTTGGCATCGTGC
GATCCCTGTTGCATCGTTGCCGAAAACGCTCACGAACCGTGTATGGTCTT
GCCACCATCTTCATGTGTTTCAAGTTGGCAGTTTCCTCGCTTGAGTCAAA
TATCGTCGTTTATTCCACGATCGTGACTTTGCCGTGTAGCTGGAGCATCA
GCCGTTGAGGCAGCAAAGGCAACGCAGGAGGCCAAGGAGGTGGAAGAGGG
AGCTGGTGTGCAGGCTGCCCTGCCGAATACAAGGGAGCGGCCCTTGAGGG
TTGAGCGCTTCCCACGGCAAATGAACAAGGTGTGTACCCTGCTTTTCATG
CAGCAGTACTGTGGTGTAAGTAATTTGCGGTGGCGCGGAGATAGGACATT
CGTAGGGCTACAGCTAGTACCTGGCCAGACGTGTTTCCTTGCGAGAGATT
GCAGATCTGAATTAAACCTAGTACCCAGCAACCAGCTGTGGGAGCGACCC
GCACGGTGGAAACATGTCGCAGAACCGCCGAATTTCCCCGTGATTATAAT
ATTTTTCGACCACACCGGTGGTGAGAGTACTCGCGCTCGTTTTACCTACC
TACAGGCGGTAATAACATAGAAACAGCGTTGGTGGTTGTGGCCTACCGTA
TTTAGCAATCGCTAGGAACCTATGCTCCCTCTGTGGAGAACCGATACTCT
GCGTAGCATTGTCCTGATCCCCCAGTGGTGCTTTGTACTTTCATCGGCAA
CGATAACAAATTCGAGTTTGCCGCACTCCTTCTTGAAGCGAAAAGAGATC
TTATGGTACGCTGTCCGACGTACTTATTGCTTTGAAGAACTTTCTGAAGC
CGTAGAGTTTTTATCCTTTGCCACTTCGCGCTATGGTCTGACACGTTTTC
TGAACATTGGAAAGGAGAATTCGAGAAAATTTCGTGCTGGAAATCGTAGG
GTGCCGTACTGTAAACATTTTGCGTACCAACTTTTTAACCATGTTTTAAC
GTTGATGGTCGATGCTGCGGTGACCACCATGGTCTCCGCAGAGGTACTGA
ACTCTCCACGCCGATCGTCAGGGTTTGGTTGGTACCGGCCAAAAGTGTAC
TTCCAACCCATAAAATTAGTTGCGGCCGCCGATGTAAGCGTCATCAACAA
CGCCGACTAAGTAGCTGCCTTCTACAGCCAGAGCGTCGTACTGCCGGACG
TTTGGAGGCAAACTAGATTTACGATATTGGCAAGTTTGTCGGCCTACCTA
CAAGTATTTTCATGGGTAGGAGTTATGTATGAGAGCGGGACGCCGTGGTG
TTCGACGTCCCGCTCAGGGTGCCGCGGCCACCAAAAGTATTTATTTTTCT
GAGTTCTGACTCGAAATCTGCGATTTCACGATCAGCACTGGGTGCATAAC
CTAGAAATCAGTACATTCTCTGTGTCAAAGAGAGGGTAACGTCTATCAAG
ACTTCCACACCGCACGGTTCAAGAAGCAGCAACAGCAGCACCGGCCATTT
GCCGCACCATGACGTGGCTTTCCTGCAAAAGCTGGCTGGTTTTCGATGGA
ACTTGACGTCATCAAAAGCTGCTCGTCCAAAGCAAACACATGATGAGACG
GGGTGACGGCGTGCAGAACCCGAGAAAGCGCCCCTGGCAGGTTGCCTTGG
TTATCCCCCACCCGCAAAGCCTTGCGGCGCGTTTGGAGCTATTTCTCACC
CTGTTGTCCTCACTAATACCAGTGGTGTTTACTCCATCGACCGCCGCCGT
GGTATACTCCAGCCTTTTGTCCAGGTCGCATGCATTTTGTCATCAGCTGT
CAGCTCGTTTCATTGTTGCCCATGAAGCTGAACTGCAATATCGGTTGTGG
TCGAGCGCATTTGAAGCTCCCCTTCACCTGTACTGCAAACAATCAAGCTG
TATATTGTGTATGTGAACTCGAACCTATTGTTTCACGTTTGTAACTGGTG
AAACGCACTGACAAACTCTGCAAACATTTCGACAGACATTCGAAAACCTG
GAGTGTGGGCCTTCAAGCGGGAAGCGGATGCGAGTTCTTGAAAGGGAGAA
GCGCGACCCATCGAAAAAAGCACAGCAGGTATGTATCGATCATACAGGGT
AACATGAGGTTATGTTTTGTTGACTCATTATGTTGGTCCGAGGGATCCCG
AACACACAGCCGTCGGCCATACAAATTTAGAATGTTGTAAAAGTATCGAC
ATGCAGGGATTTGGGAATCTATGCAGTCCGTGCTAGTGTGCTAATTCTCG
CAGCAGGTGCAGTACGTCACGTACACCACGTGGCCATACATCCAAGCATA
TTGACTGCGTGTAGGCTGTATTTGCTATGGTAGAATATACTCTTCGTGTC
CACCCTGCCTCGACCCCAAGGTTGGGGCCAGGGGGGGTCTTCCAAGCAAG
TCGGGCCAGATTCACCGTTGAGAGGTGACCCATTTCCCCTCCTGATGCGC
GACGATCGCTAGATCGATCCGTAGACGTACAAACGATGGGTCACGGCGGG
GTTACCATGTGCTCCTCATCACGCATCATCCCGAGAAGGTATCGTGGGTG
GTTTGGTGCACGTGAAAGAAGGCGACATCGTCGCCAAAAGCGCAGGCGTT
TCAGATGGAGAACTTGTTCCACGGTTCACCTGTCGTGAGTTAGCAGGGAC
GTACTCGCGTCAATCTTTGAGGTGTAGATTCGTTGAGGAAGATGTGCGAC
CGCCGACGAGCGAGGTTGTATGGCTAATCTCTGTTGCGCGATAAAAACGA
AGGCAAGGACCGGGAGGCATCAATATTTAGCAAAGCAATTTGTTCTCCTG
GAATGGACAACATCGCCGGAAGACAGACGATCATATCTACGAAGGGGGGT
TTCAGGCTGGGGGTCGAGGGGGGGGCTGGCGCACCAATGCCCAAGCGATA
AGAGCTGGCTGGCGACACAACGATCAAGACCAAGGCCCACTTCGCACAGC
AAAGGGAGGATATAATTTTTCTTCGTTTGTCCTGGGAAGCATTTTGGTGA
CGTTATCGTGGAGTGTTTGTAAAGGCGGACTTAATGCTCGCGAATTTGGA
CTTCCGTTTGTTTACGCTTGCCGTACGCCGAGAGTGCTCGTCGTGGGTAA
CCAATGAAAAATATTGTTGTTATGCTGCAAGGAGTTCTGCGCGTCCTGGT
CGTCGGGAGGATGCTGTTTTGTGTTTTTCAGTACTTTATAGCCTTTGCAT
TGTCGTGGTGGGATGGGCTTTTGACGTCAGATGATGAATGCTTCTCTTGT
GTCCAATGGCGGTGCAAGCAGCACTCCAGACAGAAAAGCTGTAGGAAGGT
AATTTCCTACCTTTGCATGATATGGTAGAGAAAATGACCGGCAGCACGTA
AGGCATATATAATGTAGCTCGTGCTGGCATAGTAGCACCTCAATAACAGA
GTTTCCGGTACATCAGGGGGCCAGGCTTACCGCCGGCCGGTGTGCGGGTT
AGCGTATATCTCATTTTTTCCGAGTATCAGTTTTTGTTCTGTGTAGGGGT
GCTTGATTTCATTTGCTCTTGTGCGTTGATGTGAGTACGAGCGGGATCAG
CATCCAATTTTGCAGATGCAAAAATAGTGGGCCTGTCGGTTTCATATGTG
ACAATCAACGAATCAACCAAAATCAATAAATACTGCAGGCGATACACAAT
CTCGGGTTGAAACTCTTACCAAACGTCTAAATCTCAAACTCCAATGGAAG
ATTTTCGTCATGATCGCTTTGACGGGTACGCCATCATGGTTATGGCAGCG
TTAAATTTTCTCTCGCCCACCCTACCTCGGCGAAAAAGCGAAAGGGGGAC
TAGCCATGAACCTAGACCGATACCATGTGACAGTGTCTCCCCAAGGCCAT
TCCCCGACCTTTAGCCGGCCAAAGACTAAGCCTTGGCCCCGCTCTGACCA
TTGCCGATGTCAAATGCGAACAAAGGCGACCCTGTTTCGTCACTAGCTCC
CACTCTGCCTCAAGTCTCGGCCATCGGTTGTCCCTTCTAAACCTTGTGGC
TATCGGTCATCACTACTCCATAGCTGCCTTAGCTGTAGTATTCTGGTTTT
CTACCTTCAGGATTGCTTATATCATTAGCCTACCCGATGACATTGCGCAG
TATAGGTAGAGACTCCTCCGGTAGATATGAAGATGCTTTCTCCACAACAG
GTCACAGGATGACATCAACTCAACCTCACATGAGATCAGCCGATTGCGTG
AGTTCCGTCTCCGGTAGCCAGAAAATTTACTTGGTTCGTGTCACGCGACG
GTCCAATGGTTTGCCTTAGGTGCTGCCAATCTCTGACCCCGGATTGACGT
GCAATTATTTCGTTGCAGGTCTCAGCAGTTGTCCAGAAATCGTCTCCAAA
CCGGTCTCCCACGGGATGTACGCCACTCGCACCACAGGACAGCAGCGATC
AATCCCGAGGTGCCTACGTCTGCGAGGCCGATACAAAGCCTTTTGAATGC
GGGCGTTGTGGTGGGTCTCCTCAAGCACAGTAGTATTTGTTTGGTGGGGT
ACTCCGCCAGTGAAGTTGCTGAGGTTTGTTTTCCGAGCTCTTGCTTCACA
GATATGTTTATGATGTCGTACTGGCGTCGTGGGGTTGAAACAGCTGCTGG
TACTCTATGGCTGCTGCCTAACGATAATCTTGCTCAAGTTGCCTCTCTGT
AATGTCGTAGCTGTTGTTTCGCTCTCTTGGTGCATTTGCCACATACTCTA
TAATCAAGTAGTTTGATGTTGAAGCTCTCGCAGGAAACTCGTGAGACAGG
AAGGCAACGGCATTGCCTCGTAAGACCATTAGCCATTTGTTCGAACGTGA
TGTTTATTCGTTTTCTTTGTAGCTGTTCTCACCTCACTGTCAGTCGAGGC
AAACGATGTCAATTGGTTGTTCGGTAAGATTTTCTCTACAAAGTCAATCA
TTGAGGTTGGTGGCTCACAAACGTGTACATACAGCTACCTATTGTTTTCC
CACTTCCCCGAATGCCCCCATCACTGCAAACGACACGATACCCTTCCCGC
TGTGATATCCGTACAATTTTACCGCCCACCCCTTGACCTACCGCTCTCAC
GTTTCAGCAGCGCACAACCTTCGCCAGGTCGACGGGGCCACGTCGCGGGA
ACCCAAACGATGCACGCTCTCCGGATGCGGGAGAGATGATGTACGTGATC
TCCCAATCGACTCATTTGTGGCTCCAGCGAAGCCAGCACAACTGATTCCT
GCCCAAGGCATCGCACGCACAGACACAGGAGAGGGAGAGGTGACTGAATC
AACAGGAATCACGGCGTCGGTGGACCGTGCTCTAGCACGTTGTGGCGGGT
GCGAGCGCGACGACGCCGGGAACGGGGACGCTTTGATCACATCGCGTTTT
GCAGGCGCCAAACGAAACGTCTCCACGACCTCTAGGCTGGGGCTCCGCCG
TATTCGCAAGTCTTCTGCCTCTGACCTTCAAGACCTGCGCAATATTGCAT
CATTGAAGAAAGGAAAACGACGGGCGAGAGTCGAGGTGTGTGTCAAAGAA
TTGGTGATGGGCAGGGATTACGTCAACTGCAGATCGAATTCCGCAGATCA
TAACTAATTCTTCGTTTTGCTTGGGTACGGATTGCGATTTTGTTCCTGAA
AAACAGAATCCCGATTCCGCCGTGGGGTTCCAAACCATGCTGCATCTCAG
AGCTCTTTGTTGGTGTATACAAAGAACTAAGAGGCCGACTACGTTGTAAC
TATTGACCGTGTCTTCTTTTCGTACGATGTAAGCAGGGCCGACACAATGC
GTTGTTCAATGGCGTCACTCCCCACCTATCTCTGACACCGCTTTCTGTAT
TTATGGTTGAAATGAAGCTCGGGCCACAGGTGGTTTTCGATGCGGACATT
GCCACAGAGGTAGAGCCAATCTCGAAGGGCTTAGGGCATCGAGTGAAGAG
TGTCAAGGGTAGACCCGGTACAGCGGTTCAGGTACGTTATTGGTACGCGA
TGTTCAGATGTATTTTTGATGAGTAGTTTTGAACGTTTCATGTGCTGTTG
CAATGGTAACAACTTCCTCAAAAGTAACCAAGTAAAGAACACGACGCAAC
GGTTAACGGTGCCTACGAGCAACGCCTTGTAGCCGGCCGGCGGATCGATC
CATGCGCGACGACGTCATCACCTATACGGAGAGATGTGATGCAATCACTT
AGGGCAGCTATCCGTTTCCTTGTCCCGCGTCTATCGCAAAATGGCTGAAA
ACAGCTTTGGCATGAGCTGAAGTTACAAACTCAATTGATGCCGCCCGTCG
ATTCCTCTTCCCTCAGAGCCAGACGAGGGGAATGGTAGACACGATAGCTC
CAGCACCAGTGGACGTGATGGTGGAGGAAGGGGACGCGGACGACCACATG
GGCTTAGACGAACTCTACTATGGGGGAGCGGGGGAGGGAGCTGTGTCGCC
GATGGCCGCCCTAGATGTATTCACGGTTTGGATCAAACCCGAGGGTTAGA
AGTTGGTAGCGTTGGTGCCCTCTTTCGAGCGTCTCGTTTGGCATCGTTGA
TGTAGACGGCATTATCCCCTTGGCGGGACCGTATCCGATGATATGCCACA
ATACTGATCGTCTAATGCACACGTGTTTATACAACCGGATTCGTACCTGT
TTTGCCCGGCGGGAGTATTTCCGGGTGGCACTCGAACAACGTTTTTGGGG
CGTATGTGTCTCGCATTGACGATGCTACGAACTCGTTTGGAGACAGTTTG
GCCGATTGATACTTCTCTATCAAGTTACAGCGAGGGGGAAATGAAGTTAG
GGAGATCGGGGGGCTCCGGCAAACCTGGGAGCGCAAAAACAGTAAGGATT
GCAATCCTGCGGGTGTATTAGACGACCCGCTGTAAGTTTTCCAAGTCCAG
CAAAAAGTCCGCCTTCCAAAAGTTCTCTTTGCCTGAACACAAGACTTGTT
TCCTCAAGATGCGTCGGGAATTTAGTATTTTGCATAGTACACATTTTACT
CTCTACGATACTCACAGCGTTTGCGTTTGTCTGCTGTATGTAAGGTAGTA
CTTTGGAACATTGGAATTCCGCAAACATACGAGCACATATATTTGAAGAG
TTGTTTGAGAGTTGCCGTGTTCGGCCTTATATCCTGCTGTTGCGTACTGA
TTGAGTATGCTGTATTTCAACTCAAAAATCAAACTCAGCC back to topCoding sequence (CDS) from alignment at S-dermatodea_contig10176:510..7999- >mRNA_S-dermatodea_contig10176.129.1 ID=mRNA_S-dermatodea_contig10176.129.1|Name=mRNA_S-dermatodea_contig10176.129.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2346bp|location=Sequence derived from alignment at S-dermatodea_contig10176:510..7999- (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGGTTAACGTCAAGAGAAAACGGTGTGCCTCCTATTCTTGTTCCGAGAC
CCCGTCGTTCGGGACGGGGGGAAGCAAGGAGACGGAGTTCTGCAGCGAAC
ACAATAGGGCTGGTATGGTTGATGGTTTGAAGAAACGGTGCACGAGCGAG
GGTTGCGTTGAGTACGCAGTGTACGGTCAGGATGGCAGCAGACGACCCAG
CTTGCTACTCTCTCGACGCTTCACGGAGAGCCATCATGATGGTTAACGTC
AAGAGAAAACGGTGTGCCTCCTATTCTTGTTCCGAGACCCCGTCGTTCGG
GACGGGGGGAAGCAAGGAGACGGAGTTCTGCAGCGAACACAATAGGGCTG
GTATGGTTGATGGTTTGAAGAAACGGTGCACGAGCGAGGGTTGCGTTGAG
TACGCAGTGTACGGTCAGGATGGCAGCAGACGACCCAGCTTGCTACTCTC
TCGACGCTTCACGGAGAGCCATCATGCTGGAGCATCAGCCGTTGAGGCAG
CAAAGGCAACGCAGGAGGCCAAGGAGGTGGAAGAGGGAGCTGGTGTGCAG
GCTGCCCTGCCGAATACAAGGGAGCGGCCCTTGAGGGTTGAGCGCTTCCC
ACGGCAAATGAACAAGCTGGAGCATCAGCCGTTGAGGCAGCAAAGGCAAC
GCAGGAGGCCAAGGAGGTGGAAGAGGGAGCTGGTGTGCAGGCTGCCCTGC
CGAATACAAGGGAGCGGCCCTTGAGGGTTGAGCGCTTCCCACGGCAAATG
AACAAGACATTCGAAAACCTGGAGTGTGGGCCTTCAAGCGGGAAGCGGAT
GCGAGTTCTTGAAAGGGAGAAGCGCGACCCATCGAAAAAAGCACAGCAGA
CATTCGAAAACCTGGAGTGTGGGCCTTCAAGCGGGAAGCGGATGCGAGTT
CTTGAAAGGGAGAAGCGCGACCCATCGAAAAAAGCACAGCAGGTCTCAGC
AGTTGTCCAGAAATCGTCTCCAAACCGGTCTCCCACGGGATGTACGCCAC
TCGCACCACAGGACAGCAGCGATCAATCCCGAGGTCTCAGCAGTTGTCCA
GAAATCGTCTCCAAACCGGTCTCCCACGGGATGTACGCCACTCGCACCAC
AGGACAGCAGCGATCAATCCCGAGCAGCGCACAACCTTCGCCAGGTCGAC
GGGGCCACGTCGCGGGAACCCAAACGATGCACGCTCTCCGGATGCGGGAG
AGATGATGTACGTGATCTCCCAATCGACTCATTTGTGGCTCCAGCGAAGC
CAGCACAACTGATTCCTGCCCAAGGCATCGCACGCACAGACACAGGAGAG
GGAGAGGTGACTGAATCAACAGGAATCACGGCGTCGGTGGACCGTGCTCT
AGCACGTTGTGGCGGGTGCGAGCGCGACGACGCCGGGAACGGGGACGCTT
TGATCACATCGCGTTTTGCAGGCGCCAAACGAAACGTCTCCACGACCTCT
AGGCTGGGGCTCCGCCGTATTCGCAAGTCTTCTGCCTCTGACCTTCAAGA
CCTGCGCAATATTGCATCATTGAAGAAAGGAAAACGACGGGCGAGAGTCG
AGCAGCGCACAACCTTCGCCAGGTCGACGGGGCCACGTCGCGGGAACCCA
AACGATGCACGCTCTCCGGATGCGGGAGAGATGATGTACGTGATCTCCCA
ATCGACTCATTTGTGGCTCCAGCGAAGCCAGCACAACTGATTCCTGCCCA
AGGCATCGCACGCACAGACACAGGAGAGGGAGAGGTGACTGAATCAACAG
GAATCACGGCGTCGGTGGACCGTGCTCTAGCACGTTGTGGCGGGTGCGAG
CGCGACGACGCCGGGAACGGGGACGCTTTGATCACATCGCGTTTTGCAGG
CGCCAAACGAAACGTCTCCACGACCTCTAGGCTGGGGCTCCGCCGTATTC
GCAAGTCTTCTGCCTCTGACCTTCAAGACCTGCGCAATATTGCATCATTG
AAGAAAGGAAAACGACGGGCGAGAGTCGAGAGCCAGACGAGGGGAATGGT
AGACACGATAGCTCCAGCACCAGTGGACGTGATGGTGGAGGAAGGGGACG
CGGACGACCACATGGGCTTAGACGAACTCTACTATGGGGGAGCGGGGGAG
GGAGCTGTGTCGCCGATGGCCGCCCTAGATGTATTCACGGTTTGGATCAA
ACCCGAGGGTTAGAGCCAGACGAGGGGAATGGTAGACACGATAGCTCCAG
CACCAGTGGACGTGATGGTGGAGGAAGGGGACGCGGACGACCACATGGGC
TTAGACGAACTCTACTATGGGGGAGCGGGGGAGGGAGCTGTGTCGCCGAT
GGCCGCCCTAGATGTATTCACGGTTTGGATCAAACCCGAGGGTTAG back to top
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