mRNA_S-dermatodea_contig11975.1233.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: A0A6H5KET7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KET7_9PHAE) HSP 1 Score: 197 bits (501), Expect = 9.480e-61 Identity = 94/132 (71.21%), Postives = 111/132 (84.09%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEELGMTP-FVSDKLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALLEHAGVRVPLDRIF 395
+LDKM+ELRP+VETGYENILLVRLLIEE LG+ + S+ LL +WGP +R+ L RYGL RE+LV+AFG ARDEW+E DF GWL AN FY G+ EA+SAC GEVYV+TTKQ RFASALLEHAG++VPLDRIF
Sbjct: 83 ILDKMKELRPIVETGYENILLVRLLIEERLGLPVLYPSEGLLDSWGPEARDALALRYGLGREELVDAFGSARDEWMEVDFQGWLGANKFYEGIPEAISACTGEVYVITTKQTRFASALLEHAGIKVPLDRIF 214
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: D8LNX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX0_ECTSI) HSP 1 Score: 181 bits (460), Expect = 1.640e-54 Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEE-------------------LGMTP-FVSDKLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALLEHAGVRVPLDRIF 395
+LDKM+ELRP+VETGYENILLVRLLIEE LG+ + S+ L +WGP +R+ L RY L RE+LV+AFG ARDEW+E DF GWL AN FY G+ EA+SAC GEVYV+TTKQ RFASALLEHAG++VPLDRIF
Sbjct: 68 ILDKMKELRPIVETGYENILLVRLLIEESRKSRGEQRLSTKSSSTMPRLGLPVLYPSEGLFDSWGPEARDALALRYDLSREELVDAFGSARDEWMEADFQGWLGANKFYEGIPEAISACEGEVYVITTKQTRFASALLEHAGIKVPLDRIF 218
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: A0A835YJR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJR6_9STRA) HSP 1 Score: 141 bits (356), Expect = 5.860e-39 Identity = 70/142 (49.30%), Postives = 92/142 (64.79%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEE---------ELGMTPFVSDKLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYA--GVREAVSACAGEVYVVTTKQQRFASALLEHAGVRVPLDRIF 395
++DKMR+LRPVVETGYENILL RLL+EE E G P ++ WG ++ L +YG +++LV AFG+ RDEWI D WL AN+FY GVR+A VY++TTKQ RFA ALL+HAG+ VP D+++
Sbjct: 62 LMDKMRKLRPVVETGYENILLTRLLLEEYRMAETSGKETGTRPLTVGEIAANWGEELKDTLMRKYGYTQDELVHAFGDTRDEWIARDEESWLEANSFYERLGVRDAARYSKANVYIITTKQTRFAEALLKHAGIEVPEDKVY 203
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: A0A7I8KMI9_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KMI9_SPIIN) HSP 1 Score: 124 bits (312), Expect = 1.230e-32 Identity = 67/139 (48.20%), Postives = 92/139 (66.19%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEELGMT--PFVSD-----KLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALL-EHAGVRVPLDRIF 395
++D+M LRPVVETGYEN+LLVRLL+E ++ VSD ++L++W A + + + R+ L++ FG RDEWIE D GW+AAN FY GV EA+ E+Y+VTTKQ+RFA LL E AGV +P D+I+
Sbjct: 48 IVDQMHILRPVVETGYENLLLVRLLLELQISSIRKSSVSDGLTIERILESWS-ALKPIIMMEWNEDRDSLIDLFGRVRDEWIENDLSGWVAANRFYPGVAEALKFSCSEIYIVTTKQKRFADVLLRELAGVTIPSDKIY 185
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: A0A1D1Y054_9ARAE (Gamma-glutamyl phosphate reductase n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y054_9ARAE) HSP 1 Score: 124 bits (310), Expect = 2.450e-32 Identity = 66/139 (47.48%), Postives = 89/139 (64.03%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEELGMTPFVS-------DKLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALL-EHAGVRVPLDRIF 395
++D+M LRPVVETGYEN+LLVRLL+E ++ S + +L++W P + + + R+ LV+ FG RDEWIE D GW+ AN FY GV EA+ + +YVVTTKQ RFA LL E AGV +P+DRI+
Sbjct: 48 IIDQMHILRPVVETGYENLLLVRLLLEIQMPSIQKSSVSAGVTIEGILESW-PELKPVIMEEWHEERDSLVDLFGRVRDEWIEKDLSGWIGANRFYPGVAEALKFSSSRIYVVTTKQSRFADVLLRELAGVTIPMDRIY 185
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: A0A2G5CSH7_AQUCA (Uncharacterized protein n=2 Tax=Aquilegia coerulea TaxID=218851 RepID=A0A2G5CSH7_AQUCA) HSP 1 Score: 120 bits (300), Expect = 1.810e-31 Identity = 63/142 (44.37%), Postives = 92/142 (64.79%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEEL----------GMTPFVSDKLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALLEH-AGVRVPLDRIF 395
++D+M +RPVVETGYEN+LLVRLL+E +L G+T +++L+ W + + + R++L+E FG+ RDEW+E DF W+ AN Y GV +A+ + +VY+VTTKQ RFA ALL+ AGV +P DRI+
Sbjct: 47 IVDQMHVVRPVVETGYENLLLVRLLLEIQLPSIRKSSVAAGLTV---EEILENWTKL-KPVIMNEWNENRDELIELFGKVRDEWLEKDFSSWIGANRLYPGVSDALKFASSKVYIVTTKQSRFADALLQQLAGVTLPSDRIY 184
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: A0A7J6VQ25_THATH (Ribosomal rna small subunit methyltransferase g n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A7J6VQ25_THATH) HSP 1 Score: 121 bits (304), Expect = 1.880e-31 Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEEL----------GMTPFVSDKLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALLEH-AGVRVPLDRIF 395
++D+M +RPVVETGYEN+LLVRLL+E +L G+T D++L+ W + + + RE L+E FG+ RDEW+E DF W+ AN Y GV +A++ + VY+VTTKQ RFA ALL+ AGV +P D+I+
Sbjct: 47 IVDQMHVVRPVVETGYENLLLVRLLLEIQLPSIRKSSVAAGLTV---DEILENWSKI-KPVIMNEWNENREDLIELFGKVRDEWLEKDFSSWIGANRLYPGVSDALNFASSRVYIVTTKQSRFADALLQQLAGVTLPSDKIY 184
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: UPI001C52BC0F (uncharacterized protein LOC122059247 isoform X1 n=4 Tax=Proteaceae TaxID=4328 RepID=UPI001C52BC0F) HSP 1 Score: 121 bits (304), Expect = 1.970e-31 Identity = 64/141 (45.39%), Postives = 86/141 (60.99%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEELGM---------TPFVSDKLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALLEH-AGVRVPLDRIF 395
++D+M +RPVVETGYEN+LLVRLL+E + +D +L+ W + + + RE LVE FG+ RDEWIE D W+ AN FY GV +A+ + VY+VTTKQ RFA ALL+ AGV +P DRI+
Sbjct: 47 IIDQMHVVRPVVETGYENVLLVRLLLETRMPTIRKSSVHVAAELTNDGILENWSKL-KPVILEEWNENRESLVELFGKVRDEWIEKDLSSWIGANRFYPGVSDALKFASSRVYIVTTKQGRFADALLQELAGVTMPSDRIY 186
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: UPI0007AF26AF (uncharacterized protein LOC107638079 n=1 Tax=Arachis ipaensis TaxID=130454 RepID=UPI0007AF26AF) HSP 1 Score: 118 bits (296), Expect = 4.510e-31 Identity = 66/145 (45.52%), Postives = 90/145 (62.07%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEEL----------GMTPFVSDKLLQTWG---PASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALL-EHAGVRVPLDRIF 395
++D+M +RPVVETGYEN+LLVRLL+E + G+T + +L+ W P EE + RE L++ FG+ RDEW+E DF W+ AN FY GV +A+ + VY+VTTKQ RFA ALL E AGV +P +RI+
Sbjct: 47 IVDQMHSVRPVVETGYENVLLVRLLLETRIPSIRKSSVAEGLTV---EGILENWSKLKPVIMEE----WSENRETLIDLFGKVRDEWLEQDFATWIGANRFYPGVSDALKFASSRVYIVTTKQSRFADALLREIAGVTIPPERIY 184
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Match: S8DIX9_9LAMI (Uncharacterized protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8DIX9_9LAMI) HSP 1 Score: 118 bits (296), Expect = 7.250e-31 Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 3
Query: 3 MLDKMRELRPVVETGYENILLVRLLIEEELGMTP-------FVSDKLLQTWGPASREELTTRYGLRREQLVEAFGEARDEWIETDFPGWLAANTFYAGVREAVSACAGEVYVVTTKQQRFASALLEH-AGVRVPLDRIF 395
++D+M +RPVVETGYEN+LLVRLL+E + V +++L+ W + + + +E L++ FGE RDEWIE DF W++AN FY GV +A+ + ++Y+VTTKQ RFA ALL + AGV VP +RI+
Sbjct: 47 IVDQMHLVRPVVETGYENVLLVRLLLEIKFPSIRKSSVSEGLVVNQILENWA-GIKPVIMAEWDEDKEALIDLFGEIRDEWIENDFASWISANRFYPGVPDALKFSSSKIYIVTTKQSRFADALLRNLAGVTVPPERIY 184 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11975.1233.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11975.1233.1 >prot_S-dermatodea_contig11975.1233.1 ID=prot_S-dermatodea_contig11975.1233.1|Name=mRNA_S-dermatodea_contig11975.1233.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=131bp MLDKMRELRPVVETGYENILLVRLLIEEELGMTPFVSDKLLQTWGPASREback to top mRNA from alignment at S-dermatodea_contig11975:2697..6630+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11975.1233.1 ID=mRNA_S-dermatodea_contig11975.1233.1|Name=mRNA_S-dermatodea_contig11975.1233.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3934bp|location=Sequence derived from alignment at S-dermatodea_contig11975:2697..6630+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11975:2697..6630+ >mRNA_S-dermatodea_contig11975.1233.1 ID=mRNA_S-dermatodea_contig11975.1233.1|Name=mRNA_S-dermatodea_contig11975.1233.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=786bp|location=Sequence derived from alignment at S-dermatodea_contig11975:2697..6630+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |