mRNA_S-dermatodea_contig11880.1181.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A6H5JB93_9PHAE (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JB93_9PHAE) HSP 1 Score: 162 bits (410), Expect = 4.470e-46 Identity = 73/86 (84.88%), Postives = 82/86 (95.35%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEFPAM 258
QVTTTRNVTSTPFVDWFCGGLQ+QVDHHLFPQIPRHNL+KVHTLVESFCK+H V YHEA+M+EGTKEVL+HL +VS+ FI+EFPAM
Sbjct: 394 QVTTTRNVTSTPFVDWFCGGLQYQVDHHLFPQIPRHNLRKVHTLVESFCKQHDVHYHEASMWEGTKEVLSHLSDVSAEFIAEFPAM 479
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A812UH41_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UH41_SYMMI) HSP 1 Score: 142 bits (357), Expect = 1.190e-39 Identity = 64/86 (74.42%), Postives = 72/86 (83.72%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEFPAM 258
QV+TTRN+TST FVDWFCGGLQ+QVDHHLFP +PRHNLKK H LVESFCK GV YHE M+ GTKEVL HL +VS F++EFPAM
Sbjct: 230 QVSTTRNITSTWFVDWFCGGLQYQVDHHLFPSLPRHNLKKAHELVESFCKSEGVTYHETDMWVGTKEVLMHLSKVSREFVTEFPAM 315
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A835YVN5_9STRA (Delta-6 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN5_9STRA) HSP 1 Score: 142 bits (357), Expect = 2.120e-38 Identity = 66/86 (76.74%), Postives = 72/86 (83.72%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEFPAM 258
QVTTTRNV+ FVDWFCGGLQ+QVDHHLFP IPRHNLKKVH LV +FC+E+GV YHEA+M GT EVL HL EVS AFI EFPAM
Sbjct: 384 QVTTTRNVSPNLFVDWFCGGLQYQVDHHLFPSIPRHNLKKVHALVAAFCRENGVAYHEASMLAGTGEVLGHLKEVSEAFIHEFPAM 469
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A6V1P576_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V1P576_HETAK) HSP 1 Score: 138 bits (347), Expect = 6.080e-37 Identity = 63/86 (73.26%), Postives = 69/86 (80.23%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEFPAM 258
QVTTTRN+TS FVDWFCGGLQ+QVDHHLFP IPRHNLKK H LV FCKEH V YHE M+ GTKEVL+ L VS+ F +EFPAM
Sbjct: 385 QVTTTRNITSNWFVDWFCGGLQYQVDHHLFPMIPRHNLKKTHQLVTGFCKEHSVTYHETNMWVGTKEVLSFLNNVSTEFFTEFPAM 470
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A835YIW8_9STRA (Delta-6 fatty acid desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIW8_9STRA) HSP 1 Score: 135 bits (341), Expect = 4.620e-36 Identity = 63/86 (73.26%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEFPAM 258
QVTTTRNV+ FVDWFCGGLQ+QVDHHLFP IPRHNL KVH V +FCKE+GV YHEA+M GT EVL+HL VS+ FI EFPAM
Sbjct: 387 QVTTTRNVSPNLFVDWFCGGLQYQVDHHLFPSIPRHNLPKVHAAVAAFCKENGVEYHEASMLAGTVEVLSHLKGVSTQFIGEFPAM 472
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A1S7C7Q7_9STRA (Delta-6 fatty acid desaturase n=2 Tax=Nannochloropsis TaxID=5748 RepID=A0A1S7C7Q7_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.620e-36 Identity = 60/86 (69.77%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEFPAM 258
QVTTTRNVT + V WFCGGL +QVDHHLFP IPRH L K+H LVE FCK+HGV+YHE M+EGTKEVLAHL V+ F+++FPAM
Sbjct: 389 QVTTTRNVTGSWLVQWFCGGLGYQVDHHLFPMIPRHRLGKLHGLVEGFCKDHGVKYHETNMWEGTKEVLAHLSSVTKEFVADFPAM 474
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: Q49S39_9STRA (Fatty acid desaturase n=1 Tax=Glossomastix chrysoplasta TaxID=172669 RepID=Q49S39_9STRA) HSP 1 Score: 134 bits (336), Expect = 2.230e-35 Identity = 57/86 (66.28%), Postives = 71/86 (82.56%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEFPAM 258
QVTTTRN+T +PFV WFCGGLQFQV+HHLFP +PRHNL + H +V +FCKE GV+YHEA + GTKE+L+ L EV++ F+ EFPAM
Sbjct: 380 QVTTTRNITGSPFVHWFCGGLQFQVEHHLFPSLPRHNLPRAHEIVTAFCKEQGVKYHEADLLTGTKEILSCLSEVTTEFLDEFPAM 465
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A7S1Y960_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y960_9STRA) HSP 1 Score: 124 bits (310), Expect = 5.070e-35 Identity = 59/88 (67.05%), Postives = 66/88 (75.00%), Query Frame = 1
Query: 1 QVTTTRNVTS-----TPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEF 249
QVTTTRNVT FVDWFCGGLQ+QVDHHLFP +PRH+LKK H LV SFCKE GV+YHEA M +GT EVL HL VS F+ +F
Sbjct: 11 QVTTTRNVTGGHGIPQAFVDWFCGGLQYQVDHHLFPTLPRHSLKKAHALVASFCKEWGVKYHEADMVDGTMEVLQHLKSVSDEFVIDF 98
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A4D9CU91_9STRA (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CU91_9STRA) HSP 1 Score: 132 bits (333), Expect = 6.870e-35 Identity = 59/86 (68.60%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 1 QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEFPAM 258
QVTTTRNVT + WFCGGL +QVDHHLFP IPRH L ++H LVESFCKEHGV+YHE +M+EGT EVLAHL V+ F+++FPAM
Sbjct: 390 QVTTTRNVTGGWLIQWFCGGLGYQVDHHLFPMIPRHRLGQLHGLVESFCKEHGVKYHETSMWEGTLEVLAHLASVTKEFVTDFPAM 475
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Match: A0A7S3DR72_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DR72_9STRA) HSP 1 Score: 129 bits (324), Expect = 1.340e-33 Identity = 61/88 (69.32%), Postives = 68/88 (77.27%), Query Frame = 1
Query: 1 QVTTTRNVTS-----TPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKEHGVRYHEATMFEGTKEVLAHLGEVSSAFISEF 249
QVTTTRN+T FVDWFCGGLQ+QVDHHLFP +PRHNLKK H LVESFCKE GV+YHEA + EGT EVL HL VS+ F+ EF
Sbjct: 380 QVTTTRNITGGHGFPQAFVDWFCGGLQYQVDHHLFPSLPRHNLKKTHALVESFCKEWGVKYHEADLVEGTFEVLDHLNNVSNEFVLEF 467 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11880.1181.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11880.1181.1 >prot_S-dermatodea_contig11880.1181.1 ID=prot_S-dermatodea_contig11880.1181.1|Name=mRNA_S-dermatodea_contig11880.1181.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=87bp QVTTTRNVTSTPFVDWFCGGLQFQVDHHLFPQIPRHNLKKVHTLVESFCKback to top mRNA from alignment at S-dermatodea_contig11880:6827..7087- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11880.1181.1 ID=mRNA_S-dermatodea_contig11880.1181.1|Name=mRNA_S-dermatodea_contig11880.1181.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=261bp|location=Sequence derived from alignment at S-dermatodea_contig11880:6827..7087- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11880:6827..7087- >mRNA_S-dermatodea_contig11880.1181.1 ID=mRNA_S-dermatodea_contig11880.1181.1|Name=mRNA_S-dermatodea_contig11880.1181.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at S-dermatodea_contig11880:6827..7087- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |