prot_S-dermatodea_contig11869.1171.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11869.1171.1
Unique Nameprot_S-dermatodea_contig11869.1171.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length601
Homology
BLAST of mRNA_S-dermatodea_contig11869.1171.1 vs. uniprot
Match: A0A6H5KU46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU46_9PHAE)

HSP 1 Score: 153 bits (386), Expect = 1.830e-35
Identity = 191/480 (39.79%), Postives = 226/480 (47.08%), Query Frame = 0
Query:  143 AIPVSPPSSPTHVAPQQGVATVTSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIQQSPSGGAPVAI-------PAAVMTPVAPVARIKLGRGRKLCPNCSALTKSAVKQCRECQHVFNPMSSRLRPPPREPKENEQEPIPARRRLRPSQRFTSVDYELCEASPATATVVGDSS--GRSAGSDRRPLGASNAAGGVNHRADSGVGEGLLAAAPDVVGRKAGVSAGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR-------AQANTASSQRGNLPASSAHMLLLSSLPDRQRFAQDLLASPTPT---VPTSPELIPAATPAGPLLFMP---------SVASLEDVTGWLPEPA---APSAAXXXXXXPLPPAQHQ------------LEHQHRSAGVFEASVTDLLLGD----EDSTPPLLQPRPEDL------IDLSAESQDRDPFEDVELC-LEGG 568
            AIP+SPPSSPTHVAP +  A   +                 XXXXX                  +   P+ G P +        P +   P A    ++LGRGRKLCP+C ALTKSAVKQCR C HVFNP+S R+R   REPKENE  P+  RRR RPSQR          A P  A   G  +  GR+A S RRPL A    G  N R  SG     +AA P    +   VSA                      XXXXXXXXXXXXXXXXXXX        A A+  +   G LP  S        LP+RQR A+DL+ASP P+   VP SPEL P ATPAGPLLF+          S +SLED   WLP      +P+AA           QHQ             ++Q   AG    S+T LLLGD    E+     L  R  +       +DLSA+ QDRDPF  VE+  LE G
Sbjct:  107 AIPISPPSSPTHVAPTRLPAAAEAQEVVAAVVEAPKPETAAXXXXXQA----------------LPSPPAPGLPASAVAEGVGGPVSSSGPPAAAVPVRLGRGRKLCPSCKALTKSAVKQCRLCHHVFNPVS-RMRAQHREPKENEDAPVLPRRRHRPSQRLLESRVVSAAAGPQEAAPTGGEAAVGRAA-SGRRPLAAFMGGGDTNQRVASGA----MAATPVATNKTGAVSASGEQAPKRSHKRKVPLPPGVVPXXXXXXXXXXXXXXXXXXXXXXXXXAPAAASEVTGPHGILPRLS--------LPERQRVAEDLVASPAPSHVLVPESPELAPTATPAGPLLFIAPPPASPSSNSPSSLEDDPEWLPHSGVIVSPAAAFVQ--------QHQERXXXXXXXWXNQQNQLYLAGAA-TSLTGLLLGDNQEEEEEAELALPVRRHESGGGEIDLDLSADCQDRDPFAGVEITWLENG 547          
BLAST of mRNA_S-dermatodea_contig11869.1171.1 vs. uniprot
Match: D8LSG9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG9_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.180e-23
Identity = 114/239 (47.70%), Postives = 131/239 (54.81%), Query Frame = 0
Query:  233 IKLGRGRKLCPNCSALTKSAVKQCRECQHVFNPMSSRLRPPPREPKENEQEPIPARRRLRPSQRFTSVDYELCEASPAT-ATVVGDSSGRSAGSDRRPLGASNAAGGVNHRADSGVGEGLLAAAPDVVGRKAGVSAGVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQANTASSQRGNLPASSAHMLLLSSLPDRQRFAQDLLASPTPT---VPTSPELIPAATPAG 467
            ++LGRGRKLCP+C ALTKSAVKQCR C HVFNP+S R+R   REPKEN+  P+  RRR RPSQR          A P   A   G+ +   A S RRPL A N  G  N R  SG       AA  V  +K G  +  G                  XXXXXXXXXXXXXXXXXXXX             +      +  LS LP+RQR A+DL+ASP P+   VP SPEL P ATPAG
Sbjct:   94 VRLGRGRKLCPSCKALTKSAVKQCRLCHHVFNPVS-RMRAQHREPKENDDAPVLPRRRHRPSQRLLESRVVSAAAGPQEGAPAGGEGAVGGAASARRPLAAFNGGGDTNQRVASGA-----MAATAVATKKTGAVSASGEQAPKRSHKRKVPLPPGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTGPHGILPRLS-LPERQRVAEDLVASPAPSHVLVPESPELAPTATPAG 325          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11869.1171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU46_9PHAE1.830e-3539.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSG9_ECTSI1.180e-2347.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11869contigS-dermatodea_contig11869:2785..6716 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11869.1171.1mRNA_S-dermatodea_contig11869.1171.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11869 1595..6716 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11869.1171.1 ID=prot_S-dermatodea_contig11869.1171.1|Name=mRNA_S-dermatodea_contig11869.1171.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=601bp
MTAQKMIKSSSTESFKAYKFQHKVHTGSSVIEPDRREREGVANHHHHNHH
NHHHHNHHQTEVADVPLDMRDQPWRDAATNSEGKGDASMSGDAAAAAAAP
RARPNKVEPDSHQPLERRTPAIVVATGSNDAAPAAAAATTVPAIPVSPPS
SPTHVAPQQGVATVTSTPITPTGVVPVPTAAAAAAASGQPKAATVQPDAT
KSAAAEIQQSPSGGAPVAIPAAVMTPVAPVARIKLGRGRKLCPNCSALTK
SAVKQCRECQHVFNPMSSRLRPPPREPKENEQEPIPARRRLRPSQRFTSV
DYELCEASPATATVVGDSSGRSAGSDRRPLGASNAAGGVNHRADSGVGEG
LLAAAPDVVGRKAGVSAGVGGGGRAVQQQPPKRSHKRKIPLPPGVLPPKR
KKGAAAAARAQANTASSQRGNLPASSAHMLLLSSLPDRQRFAQDLLASPT
PTVPTSPELIPAATPAGPLLFMPSVASLEDVTGWLPEPAAPSAAAAATAT
PLPPAQHQLEHQHRSAGVFEASVTDLLLGDEDSTPPLLQPRPEDLIDLSA
ESQDRDPFEDVELCLEGGAGCGAGGGGGSGSVPAGVPLAFSLVGAGGGLE
Q
back to top