mRNA_S-dermatodea_contig11820.1150.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: D8LC32_ECTSI (DUF4110 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC32_ECTSI) HSP 1 Score: 180 bits (457), Expect = 6.210e-47 Identity = 99/115 (86.09%), Postives = 102/115 (88.70%), Query Frame = 2
Query: 50 GVREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELEAXXXXXRKEKKASGPRGSRR 394
GVREEIRQLQE+L VDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESE PLE MTEK +RRDAFALAGERYAELEPSLARLN LE EQR LEA R+EKKASGPR SRR
Sbjct: 669 GVREEIRQLQELLDVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEVPLEAMTEKGLRRDAFALAGERYAELEPSLARLNALEAEQRGLEAREAEKRREKKASGPRSSRR 783
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: A0A836CMD6_9STRA (DUF4110 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD6_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.690e-20 Identity = 67/118 (56.78%), Postives = 80/118 (67.80%), Query Frame = 2
Query: 35 RRGHGGVREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVR---RRDESEEPLE-RMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELEAXXXXXRKEKKASG 376
RRG G +R EIR LQE LG DDPNRTP AGE +R F+ RT +W TE +R +R E L+ R +EKE+RRDAFALA R+AELEP+L RLNELE EQ +EA + KKA G
Sbjct: 640 RRGEG-IRAEIRALQEQLGTDDPNRTPLAGETLRLFYARTANYWATEFLRAVEQRGTEERGLQQRWSEKEIRRDAFALAEARFAELEPALQRLNELEAEQLAMEARAAEKKALKKAGG 756
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: A0A2D4BY25_PYTIN (DUF4110 domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY25_PYTIN) HSP 1 Score: 95.5 bits (236), Expect = 1.090e-17 Identity = 56/94 (59.57%), Postives = 66/94 (70.21%), Query Frame = 2
Query: 53 VREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELE 334
+R EI +LQE LG+DD NRTPQ GE +RDFF RT+ FW TEI RR D E L + KE++R+ F LA ERY EL P L RLN LE EQRE+E
Sbjct: 613 IRAEIEKLQEQLGLDDINRTPQMGENLRDFFARTQEFWATEIARRPDTIERQL---SVKEIKREGFLLAEERYNELLPVLERLNALEAEQREME 703
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: A0A7R9U6E1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6E1_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.970e-16 Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 2
Query: 50 GVREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDE-SEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELE 334
G+R +++L E L DDP RTP AGE RDFF RT W +++ R S+ P +EKE+RRDAF+LA ERYAELEP L L++LE+EQ E E
Sbjct: 39 GLRARLQELHERLDTDDPERTPSAGETCRDFFARTSDVWVRKLLEERPGLSDNP--HFSEKELRRDAFSLAQERYAELEPVLQELDDLEREQNEAE 132
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: K3WC65_GLOUD (DUF4110 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WC65_GLOUD) HSP 1 Score: 89.0 bits (219), Expect = 1.640e-15 Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = 2
Query: 53 VREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELEAXXXXXRKEKKASGPR 382
+R E+ +LQE L +DD NRTPQ GE +RDFF RT +W++EI +R D E L + KE++R+ F++A ERY EL P L RLN LEQEQ+E E +K K G R
Sbjct: 637 IRAEMEKLQEQLNLDDINRTPQMGENLRDFFARTANYWSSEIAKRADTHERQL---SIKEIKREGFSMAEERYNELLPVLERLNVLEQEQKEAEELHQMKKKGGKDKGRR 743
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: A0A8K1CJ50_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJ50_PYTOL) HSP 1 Score: 87.8 bits (216), Expect = 3.890e-15 Identity = 55/111 (49.55%), Postives = 69/111 (62.16%), Query Frame = 2
Query: 53 VREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELEAXXXXXRKEKKASGPRG 385
+R EI +LQE LG+DD NRTPQ GE +RDFF RT+ +W T I +R D E L KE++R+ F +A ERY EL P L RLN LE EQ+E+E +K K RG
Sbjct: 621 IRAEIEKLQEQLGLDDINRTPQMGENLRDFFARTQEYWATVIGQRPDTIERQL---NIKEIKREGFVMAEERYNELLPILERLNVLEAEQKEMEEQYLLKKKGGKEKARRG 728
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: A0A5D6XRB5_9STRA (DUF4110 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRB5_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 9.720e-15 Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 2
Query: 53 VREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELE 334
+R E+ LQE L +DD NRTPQ GE +RDFF RT +W+ EI +R D E L + KE++R+ F++A ERY EL P L RLN LEQEQ+E E
Sbjct: 676 IRAEMEALQEQLNLDDANRTPQMGENLRDFFARTAGYWSAEIAQRADTHERQL---SIKEIKREGFSMAEERYNELLPVLERLNVLEQEQKEAE 766
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: A0A3R7G8X7_9STRA (DUF4110 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G8X7_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.360e-12 Identity = 51/110 (46.36%), Postives = 65/110 (59.09%), Query Frame = 2
Query: 53 VREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELEAXXXXXRKEKKASGPR 382
+R E+ +LQE LG+DD RTPQ GE +RDFF RT W E++ +E L + KE++R+ FALA ERY EL P L RLN LE EQ+E E +K K R
Sbjct: 671 IRAEMEKLQEQLGLDDIARTPQMGENLRDFFARTDATWAREVMNLPSTTEREL---SVKEIKREGFALAEERYKELLPVLERLNALEIEQKEAEELHQLKKKSSKEKSRR 777
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: A0A329SBG5_9STRA (DUF4110 domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A329SBG5_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.790e-12 Identity = 47/94 (50.00%), Postives = 61/94 (64.89%), Query Frame = 2
Query: 53 VREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELE 334
+R E+ +LQE LG+DD +RTPQ GE +RDFF RT W E+++R E L + KE++R+ F LA RY EL P L RLN LE EQ+E E
Sbjct: 645 IRAEMEKLQEQLGLDDVDRTPQMGENLRDFFARTDATWAREVMQRPSTVEHEL---SIKEIKREGFLLAEARYKELSPVLERLNALELEQKEAE 735
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Match: A0A024FYN0_9STRA (DUF4110 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYN0_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 7.310e-12 Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 2
Query: 53 VREEIRQLQEVLGVDDPNRTPQAGEVMRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELEPSLARLNELEQEQRELEAXXXXXRKEK 364
+R E+ +LQE L +DD +RTPQ GE +RDFF RT +WT +I D E L T KEM+R+ F A +RY EL+ L RLNELE +Q+E E +K K
Sbjct: 593 IRAEMEKLQEQLDLDDRDRTPQLGENLRDFFARTCHYWTEQIANLPDAVERQL---TVKEMKREGFDRAEQRYNELQNVLERLNELELQQKEAEECQQHKKKTK 693 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11820.1150.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11820.1150.1 >prot_S-dermatodea_contig11820.1150.1 ID=prot_S-dermatodea_contig11820.1150.1|Name=mRNA_S-dermatodea_contig11820.1150.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=89bp MRDFFDRTKLFWTTEIVRRRDESEEPLERMTEKEMRRDAFALAGERYAELback to top mRNA from alignment at S-dermatodea_contig11820:1815..6028- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11820.1150.1 ID=mRNA_S-dermatodea_contig11820.1150.1|Name=mRNA_S-dermatodea_contig11820.1150.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4214bp|location=Sequence derived from alignment at S-dermatodea_contig11820:1815..6028- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11820:1815..6028- >mRNA_S-dermatodea_contig11820.1150.1 ID=mRNA_S-dermatodea_contig11820.1150.1|Name=mRNA_S-dermatodea_contig11820.1150.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at S-dermatodea_contig11820:1815..6028- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |