mRNA_S-dermatodea_contig10145.108.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: A0A6H5JQT9_9PHAE (ACOX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT9_9PHAE) HSP 1 Score: 236 bits (603), Expect = 9.400e-70 Identity = 121/161 (75.16%), Postives = 135/161 (83.85%), Query Frame = 1
Query: 1 RATRAHCQLHLLERCSEGVEGHASQAATLATGGP----SGERLNTREVMVLASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLNATDVAPSISSIRQLVGVRPNPRL 471
RATRAHCQLHL+ERC+ GVE SGE LNTREV VL+SLRDLFALS++EENMGDFLE GL+EPA A+LVRREVQ+LC ELRPEA+SLTDAWQFTDKYL S LGR+DG+VYPALMEATMAEPLNATDVAPSI+SIR+L+GVRPNPRL
Sbjct: 144 RATRAHCQLHLVERCTAGVEQQREXXXXXXXXXXXXVASGEELNTREVNVLSSLRDLFALSIVEENMGDFLESGLLEPAAAALVRREVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEATMAEPLNATDVAPSITSIRELIGVRPNPRL 304
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: D7FYQ3_ECTSI (Acyl-CoA oxidase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ3_ECTSI) HSP 1 Score: 169 bits (428), Expect = 5.770e-47 Identity = 81/97 (83.51%), Postives = 90/97 (92.78%), Query Frame = 1
Query: 181 ENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLNATDVAPSISSIRQLVGVRPNPRL 471
+NMGDFLE GL+EPA A LVRREVQ+LC ELRPEA+SLTDAWQFTDKYL S LGR+DG+VYPALMEA MAEPLNATDVAPSI+SIR+L+GVRPNPRL
Sbjct: 4 QNMGDFLESGLLEPAAAPLVRREVQSLCLELRPEAISLTDAWQFTDKYLSSALGRSDGRVYPALMEAAMAEPLNATDVAPSITSIRELIGVRPNPRL 100
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: A0A836CMS5_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS5_9STRA) HSP 1 Score: 141 bits (356), Expect = 6.800e-32 Identity = 75/157 (47.77%), Postives = 99/157 (63.06%), Query Frame = 1
Query: 1 RATRAHCQLHLLERCSEGVEGHASQAATLATGGPSGERLNTREVMVLASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLNATDVAPSISSIRQLVGVRPNPRL 471
RA RAHCQLHLL+ + V+ +QA+ GP +N RE VL L LFALS +E ++G F + I A V + +LC+ +RPEAV+L DA+ F+DKYLGS +GR DG +YPALME + EPLNA++VA S+ I+ LVG P RL
Sbjct: 529 RAARAHCQLHLLQHFAAAVQALQAQASA----GPCAAVINEREAAVLRDLCSLFALSTIEADLGQFRDQDTISSQDARQVLHLISDLCASIRPEAVALVDAFHFSDKYLGSAIGRFDGNIYPALMEWALREPLNASEVAESLPHIKLLVGTHPGARL 681
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: A0A7S2A5P7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A5P7_TRICV) HSP 1 Score: 103 bits (257), Expect = 1.680e-21 Identity = 59/140 (42.14%), Postives = 79/140 (56.43%), Query Frame = 1
Query: 1 RATRAHCQLHLLERCSEGVEGHASQAATLATGGPSGERLNTREVMVLASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLNATDVAP 420
RA+RAH LL+ +E H T + +G + EV VLA L LFAL +E ++ DFLE G + P A VR V + ++RP+AV L DAW ++D L S LGR DG VYPA+ME+ +PLN T+ P
Sbjct: 73 RASRAHALCLLLDNFLSTIESHNE---TNESDEGAGAVIGPEEVAVLADLARLFALYWMERDVADFLEDGYVTPQQAGWVRSSVLVMLDKVRPDAVGLVDAWDYSDFRLKSALGRYDGDVYPAVMESAKRDPLNGTEPGP 209
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: A0A4P9WF51_9FUNG (Acyl-CoA oxidase (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WF51_9FUNG) HSP 1 Score: 102 bits (253), Expect = 3.810e-19 Identity = 59/148 (39.86%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 1 RATRAHCQLHLLERCSEGVEGHASQAATLATGGPSGERLNTREVMVLASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLNATDVAPSISSIRQL 444
R +RAHCQL L++ + +E P+ ++L+ VLA L DLFALS LE MG+F+ G + A +VR V++ ELRP AV+L DAW F+D L S LGR DG+VY + E EPLN + P + L
Sbjct: 395 RVSRAHCQLLLVDAFAHALE------------SPAAKKLDAGSRAVLARLGDLFALSTLEAEMGEFVADGFVSYQQAKMVRGAVRDALKELRPNAVALVDAWGFSDYLLDSALGRADGKVYETIFEWVSREPLNNGENYPVVKGYETL 530
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: A0A1J3HFY6_NOCCA (Putative peroxisomal acyl-coenzyme A oxidase 1.2 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3HFY6_NOCCA) HSP 1 Score: 92.4 bits (228), Expect = 6.370e-18 Identity = 53/133 (39.85%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 4 ATRAHCQLHLLERCSEGVEGHASQAATLATGGPSGERLNTREVMVLASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLN 402
A AHCQL ++ + +EG G+ + + L +L ++AL LL +++GDFL + P ASL ++++L S+LRP AV+L DA+ +TD YLGSVLGR DG VYP L E + +PLN
Sbjct: 49 AAIAHCQLIVVSKFIAKIEGEIK-----------GKGVKNQ----LKNLCYIYALHLLHKHLGDFLSTDSVTPEQASLASHQLRSLYSQLRPNAVALVDAFNYTDHYLGSVLGRYDGNVYPKLFEEALKDPLN 166
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: UPI001C4F3A2A (peroxisomal acyl-coenzyme A oxidase 1-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F3A2A) HSP 1 Score: 92.8 bits (229), Expect = 6.670e-18 Identity = 46/88 (52.27%), Postives = 61/88 (69.32%), Query Frame = 1
Query: 139 LASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLN 402
L +L +++ALSLL + GDFL G I P ASLV ++++L S++RP A++L DA+ +TD YLGS LGR DG VYP L E EPLN
Sbjct: 94 LEALCNIYALSLLHKCQGDFLSTGCISPKQASLVNGQLRSLYSQVRPNAIALVDAFNYTDHYLGSALGRYDGNVYPKLYEEAWKEPLN 181
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: V7CBX2_PHAVU (ACOX domain-containing protein n=1 Tax=Phaseolus vulgaris TaxID=3885 RepID=V7CBX2_PHAVU) HSP 1 Score: 90.1 bits (222), Expect = 5.610e-17 Identity = 45/88 (51.14%), Postives = 58/88 (65.91%), Query Frame = 1
Query: 139 LASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLN 402
L L ++ALSLL +++GDFL G I P SL +++L S+LRP A+ L DA+ +TD YLGSVLGR DG VYP L E +PLN
Sbjct: 93 LELLCSIYALSLLHKHLGDFLSTGCITPTQGSLANDMLRSLYSQLRPNAIGLVDAFNYTDHYLGSVLGRYDGDVYPKLYEEAWKDPLN 180
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: A0A0A9VRS2_ARUDO (ACOX domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9VRS2_ARUDO) HSP 1 Score: 89.7 bits (221), Expect = 1.210e-16 Identity = 45/92 (48.91%), Postives = 61/92 (66.30%), Query Frame = 1
Query: 139 LASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLNATDV 414
L L +++AL LL +++GDFL G I P +L ++ L +++RP AV+L DA+ +TD YLGSVLGR DG VYPAL E +PLN T V
Sbjct: 114 LQKLCNVYALYLLHKHLGDFLATGCITPKQGALANEQLGELYAQVRPNAVALVDAFDYTDHYLGSVLGRYDGNVYPALYEEAWKDPLNETVV 205
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Match: A0A6N2K4V8_SALVM (ACOX domain-containing protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2K4V8_SALVM) HSP 1 Score: 87.0 bits (214), Expect = 1.470e-16 Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 1
Query: 139 LASLRDLFALSLLEENMGDFLEHGLIEPATASLVRREVQNLCSELRPEAVSLTDAWQFTDKYLGSVLGRNDGQVYPALMEATMAEPLN 402
L +L ++ L+L+ + +GDFL G I P ASL ++++L S++RP A++L DA+ TD YLGSVLGR+DG VYP L E +PLN
Sbjct: 32 LQNLCYIYVLNLVHKYLGDFLSTGCITPKQASLANDQLRSLYSQIRPNAIALVDAFNHTDHYLGSVLGRSDGNVYPKLYEEAWKDPLN 119 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10145.108.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10145.108.1 >prot_S-dermatodea_contig10145.108.1 ID=prot_S-dermatodea_contig10145.108.1|Name=mRNA_S-dermatodea_contig10145.108.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=158bp RATRAHCQLHLLERCSEGVEGHASQAATLATGGPSGERLNTREVMVLASLback to top mRNA from alignment at S-dermatodea_contig10145:710..4305+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10145.108.1 ID=mRNA_S-dermatodea_contig10145.108.1|Name=mRNA_S-dermatodea_contig10145.108.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3596bp|location=Sequence derived from alignment at S-dermatodea_contig10145:710..4305+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10145:710..4305+ >mRNA_S-dermatodea_contig10145.108.1 ID=mRNA_S-dermatodea_contig10145.108.1|Name=mRNA_S-dermatodea_contig10145.108.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=948bp|location=Sequence derived from alignment at S-dermatodea_contig10145:710..4305+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |