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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 1527 |
| Cds size | 1527 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11658.1061.1 >prot_S-dermatodea_contig11658.1061.1 ID=prot_S-dermatodea_contig11658.1061.1|Name=mRNA_S-dermatodea_contig11658.1061.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=509bp
QVRLSPESRSQARLSWLLDNRSTITDAMPTAAAALLSPRVAAALGADPPL
QRLAGEAVLAFGEGGRDGGEATGWGAGALPSLAEEAAAAAVAREGVVVVV
PGGGGGGWGEGGAASMVSWRVLVREFVCYDGGGGGHSSGKRSRDPSPLGD
HPLNESTPLRVDELNPRGGGRSSGCTSSGDNSGGRERRRSEQARKRRVAQ
ESPPASPTPSTPPCLHSDHRGADDRGGRGHTALAAAAAAAWETPRRVSLA
PAAATNPATTPENGDIAAGSEAGTRRGRGQTLWETPRGVGLTPSVPARGT
PATGVLAGGGDVGGRYWGRERGQTVWETPRGVGLTPRSTRPGSYSAAGER
AQGPNTPETTGGVSFGEGRRGHDRGRTVWETPRGVGLTPKVPLGLGRDDG
RGGSSGGYAPTSTKRGRDVEHATPSNDWKPRARGQTVWETPRGVGLTPKV
SGGLGGDGGGGGGSSDGHAPTPIGRGRGIEHATPSNDCKPRARGQTVWET
PRGVGLTSK back to topmRNA from alignment at S-dermatodea_contig11658:3365..7165- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-dermatodea_contig11658.1061.1 ID=mRNA_S-dermatodea_contig11658.1061.1|Name=mRNA_S-dermatodea_contig11658.1061.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3801bp|location=Sequence derived from alignment at S-dermatodea_contig11658:3365..7165- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGTTCGATTGTCGCCGGAATCCCGCTCCCAGGCACGCCTCTCCTGGCT
CCTAGACAACCGCTCCACCATCACAGACGCGATGCCGACGGCCGCCGCCG
CACTCCTAAGCCCGCGGGTGGCAGCCGCTCTGGGGGCAGACCCTCCCCTC
CAAAGGCTAGCGGGAGAGGCCGTTCTCGCCTTCGGGGAAGGGGGTCGGGA
TGGGGGGGAGGCAACCGGGTGGGGGGCTGGAGCGCTCCCGTCTCTTGCCG
AAGAGGCTGCCGCCGCGGCCGTTGCCAGGGAAGGCGTGGTGGTGGTTGTG
CCTGGCGGTGGTGGTGGGGGTTGGGGCGAGGGGGGTGCGGCGTCGATGGT
GAGTTGGCGTGTGCTTGTTCGTGAGTTTGTGTGCTATGATGGTGGTGGTG
GTGGTGTTGGTGTTGGTGGTGGTGATCTTTTGTCGCATCAGCTAAATAAC
GCTTTTTGTCCGGGAATCAATCCAGCCAGCTAAATAACTAATTTATGATA
AATGATAAAGAAAAATGTTGTAGACCGAACCGAACCGAACCGAACCGAAC
CGAACCGAACCGAACCGAACATAACCGAACAGAACCGAACAGAACCGAAC
AGAACCGAACAGAACCGAACCGAACCGAACCGAACCCCAGTCGATGAAAG
TGTAAAGAGCTAGATATTTTTGTAAGGGAGAAACCTTCTCCTCGTGGCCT
ATTGTAAGGTATAACTAGAATAGTGTGTGCGTATGAATTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGCCTGTTGCGTGTCTGCTCATCGGTCCTGTGTG
GTGCGCGCGCGGCGCGCGTTTCTTTTCGCGTCGTGCGTACATTCCACTAC
ACTACACTACACTACACTACACTACACTACACTACACTACACTACCGTAG
AGGTGTCTGTCGCAGCATTGCGTTTGGGTGGGGGATTGGTCGATTTTTTA
TCTGTTTTATGCGGCCTGCTTTTTCTACGGGCTTGTCTCGATCGACGACT
TTTTTTTTTTTTTTATAAAAAAACGGTAGTGTAAAAACAAATGTTCAATT
TTTCNNNNNNNNNNTCTTTTCGAACGCCTACGTCTCTTCAGGGGATGAGT
ATAGTTACTTTTTTTTTAGTTACGCGAAGCGGATTGCTTGTGAGCAACAG
CAGGTTTCGCTTTTTTTTTTTTTTTTTTTTTTCTTCGTGAAAATGAAATC
AGCACGAGTTTTTTTTTCTTCTTTTTGGAAACATCGTTCATTTCACGAAA
AACATACTTGTACAAGTATTCATTTTGTTTTTTGCCGTCTTGAGCCGTTA
GGAGTCGGTCGGTTTTTGGAAACATTTAGCCACGCTCTGACTCTTTGGAA
ACAAAACTGAAGAAATAAACACTCGACGGAGGGGGGGTGGTGGGGAGCAC
TTATGTTTTTAACTGTACGCGTGTCGTACGACGTCCGAACGGGCATAGAC
CACGCACCCCCAGCATTGCCGGGGCGGAGCGGTGTGCCGGGCGTGTCGTC
GCCCGCCAGGTTGTGTTTCACGAGTATGATGATACCCAGCTGCTATTACT
ACGGGGGACTAGACCATAGTTAAAAGGTCCAAATTTGCCACAAGTCTCAA
CCTAGAAAAATCAAAACAGGCCGGAATTATCGAGGTTTCAAGGTCGAAGC
TCATGAATATGGCCATAATAATCTCGTGTTTTTGTTTTTCGTGAGATTTT
CGTTGTTGAATGGTCGGAAGAGAGTTGGGTATTATTGGCCATGATATTTT
GATATTTTGATATTTTGATCTGTTAAGTATGTTCGCGATGCCAAAGCGGA
CGTTTCATGTGAGGGGGAGGGGTGGGGTGGCGTTTCATTAGATTGGAGTT
GCCGTCTGGTTGGCGTTTTTGGTGTTGCTGCTCGCCCTGACACAGGCGAT
CTTGAGCACGTCGACAAACCTCCCCGGGAGCGATGTTTACGAGCGCGGCG
CTGAATAGGGTTGGTCCGATGGGTGTTTCAAGCATGGTAATAAGCTGGTC
GACTAATGTGTCGCTATTTCTTATTTCAACGGCGAAACTGATCCGCTCCT
CGAAGCAACCGAAAACGCCAGACGTATCCTCATTTAGGAAAACCGTCGTT
TTCATACGGTATCCCCCCCCCCCCGCCCCCCGCCGCCGCCCCGCCCCCAA
GAAATCAATTTATTCAAAGATATAAGGGGAGCTTTGGGGCCCCACCATTT
CAAATGGGAAGATGGTCCTTCCAATCTACACCTATGGAGCCTCATTTGTT
GCCGATGATGCTATGGGTTGCATTCCTCCGCCCCGCCACCGCCGCCGCTG
CTGCCGCCGCGTGTCCGCCTGACAACCAATCGAAACCCTGCCCTTGCCCT
TCGCCCACCTGATCTGATCCTTTCGTGTCGTCCTTGTTGCCCGGCGTCAC
CCACTCGCCCGCGTCGAACCGTTTTTTTGTTGCCGGCTTTTCCCCCCAAT
TGCAGCACAGCAGCGGCAAGCGCTCGCGCGACCCGTCACCTCTGGGGGAC
CATCCGCTCAACGAGAGCACCCCTCTGCGGGTCGATGAACTAAATCCACG
CGGCGGCGGCCGCAGCAGCGGCTGCACCAGCAGCGGAGACAACAGCGGAG
GCAGGGAAAGAAGAAGAAGCGAGCAGGCGCGAAAGAGGCGAGTGGCGCAG
GAAAGCCCGCCCGCAAGCCCGACCCCGTCCACGCCGCCCTGCTTGCATTC
TGACCACCGCGGCGCTGACGACCGCGGGGGCCGAGGCCACACGGCACTGG
CGGCGGCGGCGGCGGCAGCGTGGGAAACCCCTCGACGGGTTAGCCTCGCG
CCCGCCGCGGCAACAAACCCGGCCACGTCCCGCCTCCCGTCCCGCCCTGA
CGTGCAAACCCCGGACTGTCGCGCGGGGGTCGAAGGCGGTAGCCGCTCTT
ACAGCGGCGGAGACAGCACTCCTGAAAACGGAGACATCGCGGCGGGTTCG
GAAGCTGGGACGAGGAGGGGGCGGGGGCAGACGTTGTGGGAAACTCCGCG
GGGCGTGGGCCTCACGCCGAGTGTGCCCGCTCGTGGAACTCCCGCGACTG
GCGTGTTGGCCGGGGGTGGAGATGTCGGCGGGCGTTATTGGGGAAGGGAG
AGGGGGCAGACGGTCTGGGAAACCCCGAGGGGTGTCGGGTTAACCCCGAG
GTCAACGCGGCCCGGGAGTTATTCCGCGGCCGGAGAACGCGCGCAGGGGC
CGAACACGCCGGAAACCACCGGAGGCGTTTCGTTTGGAGAGGGCCGCCGG
GGACATGGTGATTTCGGCGCCGTCGCGACCGATCCGGAGCATGATGACGA
TGCGGATGACGTTGCCCTAGATGAGAGTCGGGGCAGGAGAGACCGCGGCC
GCACCGTGTGGGAGACTCCCAGAGGGGTCGGGTTGACCCCCAAGGTTCCA
CTCGGCCTTGGGCGCGATGATGGCCGCGGTGGAAGCAGCGGTGGGTACGC
GCCAACCTCCACGAAGCGCGGCCGAGATGTAGAGCACGCCACGCCGAGCA
ACGATTGGAAACCCCGAGCCAGGGGACAAACGGTGTGGGAGACTCCCAGA
GGGGTCGGGTTGACCCCCAAGGTTTCAGGCGGTCTTGGCGGCGATGGCGG
CGGGGGCGGCGGAAGCAGCGATGGGCACGCGCCAACACCCATCGGGCGCG
GCCGAGGCATAGAGCACGCAACGCCGAGCAACGACTGCAAACCCCGAGCC
AGGGGACAAACGGTGTGGGAGACCCCGAGAGGGGTCGGGCTAACCTCCAA
G back to topCoding sequence (CDS) from alignment at S-dermatodea_contig11658:3365..7165- >mRNA_S-dermatodea_contig11658.1061.1 ID=mRNA_S-dermatodea_contig11658.1061.1|Name=mRNA_S-dermatodea_contig11658.1061.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3054bp|location=Sequence derived from alignment at S-dermatodea_contig11658:3365..7165- (Saccorhiza dermatodea SderLu1190fm monoicous)
CAGGTTCGATTGTCGCCGGAATCCCGCTCCCAGGCACGCCTCTCCTGGCT
CCTAGACAACCGCTCCACCATCACAGACGCGATGCCGACGGCCGCCGCCG
CACTCCTAAGCCCGCGGGTGGCAGCCGCTCTGGGGGCAGACCCTCCCCTC
CAAAGGCTAGCGGGAGAGGCCGTTCTCGCCTTCGGGGAAGGGGGTCGGGA
TGGGGGGGAGGCAACCGGGTGGGGGGCTGGAGCGCTCCCGTCTCTTGCCG
AAGAGGCTGCCGCCGCGGCCGTTGCCAGGGAAGGCGTGGTGGTGGTTGTG
CCTGGCGGTGGTGGTGGGGGTTGGGGCGAGGGGGGTGCGGCGTCGATGGT
GAGTTGGCGTGTGCTTGTTCGTGAGTTTGTGTGCTATGATGGTGGTGGTG
GTGGTCAGGTTCGATTGTCGCCGGAATCCCGCTCCCAGGCACGCCTCTCC
TGGCTCCTAGACAACCGCTCCACCATCACAGACGCGATGCCGACGGCCGC
CGCCGCACTCCTAAGCCCGCGGGTGGCAGCCGCTCTGGGGGCAGACCCTC
CCCTCCAAAGGCTAGCGGGAGAGGCCGTTCTCGCCTTCGGGGAAGGGGGT
CGGGATGGGGGGGAGGCAACCGGGTGGGGGGCTGGAGCGCTCCCGTCTCT
TGCCGAAGAGGCTGCCGCCGCGGCCGTTGCCAGGGAAGGCGTGGTGGTGG
TTGTGCCTGGCGGTGGTGGTGGGGGTTGGGGCGAGGGGGGTGCGGCGTCG
ATGGTGAGTTGGCGTGTGCTTGTTCGTGAGTTTGTGTGCTATGATGGTGG
TGGTGGTGGTCACAGCAGCGGCAAGCGCTCGCGCGACCCGTCACCTCTGG
GGGACCATCCGCTCAACGAGAGCACCCCTCTGCGGGTCGATGAACTAAAT
CCACGCGGCGGCGGCCGCAGCAGCGGCTGCACCAGCAGCGGAGACAACAG
CGGAGGCAGGGAAAGAAGAAGAAGCGAGCAGGCGCGAAAGAGGCGAGTGG
CGCAGGAAAGCCCGCCCGCAAGCCCGACCCCGTCCACGCCGCCCTGCTTG
CATTCTGACCACCGCGGCGCTGACGACCGCGGGGGCCGAGGCCACACGGC
ACTGGCGGCGGCGGCGGCGGCAGCGTGGGAAACCCCTCGACGGGTTAGCC
TCGCGCCCGCCGCGGCAACAAACCCGGCCACCACAGCAGCGGCAAGCGCT
CGCGCGACCCGTCACCTCTGGGGGACCATCCGCTCAACGAGAGCACCCCT
CTGCGGGTCGATGAACTAAATCCACGCGGCGGCGGCCGCAGCAGCGGCTG
CACCAGCAGCGGAGACAACAGCGGAGGCAGGGAAAGAAGAAGAAGCGAGC
AGGCGCGAAAGAGGCGAGTGGCGCAGGAAAGCCCGCCCGCAAGCCCGACC
CCGTCCACGCCGCCCTGCTTGCATTCTGACCACCGCGGCGCTGACGACCG
CGGGGGCCGAGGCCACACGGCACTGGCGGCGGCGGCGGCGGCAGCGTGGG
AAACCCCTCGACGGGTTAGCCTCGCGCCCGCCGCGGCAACAAACCCGGCC
ACCACTCCTGAAAACGGAGACATCGCGGCGGGTTCGGAAGCTGGGACGAG
GAGGGGGCGGGGGCAGACGTTGTGGGAAACTCCGCGGGGCGTGGGCCTCA
CGCCGAGTGTGCCCGCTCGTGGAACTCCCGCGACTGGCGTGTTGGCCGGG
GGTGGAGATGTCGGCGGGCGTTATTGGGGAAGGGAGAGGGGGCAGACGGT
CTGGGAAACCCCGAGGGGTGTCGGGTTAACCCCGAGGTCAACGCGGCCCG
GGAGTTATTCCGCGGCCGGAGAACGCGCGCAGGGGCCGAACACGCCGGAA
ACCACCGGAGGCGTTTCGTTTGGAGAGGGCCGCCGGGGACATGCACTCCT
GAAAACGGAGACATCGCGGCGGGTTCGGAAGCTGGGACGAGGAGGGGGCG
GGGGCAGACGTTGTGGGAAACTCCGCGGGGCGTGGGCCTCACGCCGAGTG
TGCCCGCTCGTGGAACTCCCGCGACTGGCGTGTTGGCCGGGGGTGGAGAT
GTCGGCGGGCGTTATTGGGGAAGGGAGAGGGGGCAGACGGTCTGGGAAAC
CCCGAGGGGTGTCGGGTTAACCCCGAGGTCAACGCGGCCCGGGAGTTATT
CCGCGGCCGGAGAACGCGCGCAGGGGCCGAACACGCCGGAAACCACCGGA
GGCGTTTCGTTTGGAGAGGGCCGCCGGGGACATGACCGCGGCCGCACCGT
GTGGGAGACTCCCAGAGGGGTCGGGTTGACCCCCAAGGTTCCACTCGGCC
TTGGGCGCGATGATGGCCGCGGTGGAAGCAGCGGTGGGTACGCGCCAACC
TCCACGAAGCGCGGCCGAGATGTAGAGCACGCCACGCCGAGCAACGATTG
GAAACCCCGAGCCAGGGGACAAACGGTGTGGGAGACTCCCAGAGGGGTCG
GGTTGACCCCCAAGGTTTCAGGCGGTCTTGGCGGCGATGGCGGCGGGGGC
GGCGGAAGCAGCGATGGGCACGCGCCAACACCCATCGGGCGCGGCCGAGG
CATAGAGCACGCAACGCCGAGCAACGACTGCAAACCCCGAGCCAGGGGAC
AAACGGTGTGGGAGACCCCGAGAGGGGTCGGGCTAACCTCCAAGACCGCG
GCCGCACCGTGTGGGAGACTCCCAGAGGGGTCGGGTTGACCCCCAAGGTT
CCACTCGGCCTTGGGCGCGATGATGGCCGCGGTGGAAGCAGCGGTGGGTA
CGCGCCAACCTCCACGAAGCGCGGCCGAGATGTAGAGCACGCCACGCCGA
GCAACGATTGGAAACCCCGAGCCAGGGGACAAACGGTGTGGGAGACTCCC
AGAGGGGTCGGGTTGACCCCCAAGGTTTCAGGCGGTCTTGGCGGCGATGG
CGGCGGGGGCGGCGGAAGCAGCGATGGGCACGCGCCAACACCCATCGGGC
GCGGCCGAGGCATAGAGCACGCAACGCCGAGCAACGACTGCAAACCCCGA
GCCAGGGGACAAACGGTGTGGGAGACCCCGAGAGGGGTCGGGCTAACCTC
CAAG back to top
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