prot_S-dermatodea_contig11500.972.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11500.972.1
Unique Nameprot_S-dermatodea_contig11500.972.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length94
Homology
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BLAST of mRNA_S-dermatodea_contig11500.972.1 vs. uniprot
Match: D8LI69_ECTSI (U-box domain containing protein, expressed n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI69_ECTSI)

HSP 1 Score: 106 bits (264), Expect = 9.590e-25
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0 
Query:    1 MSVWRGPVDVFEAIDRRDWQTVKDAVMPGKANLRDAHHDATLLHWVVNEGHVPTVQHLLACGADV 65
            M+++R  VDVFEAI++ DWQ VKD V+PGKAN RD+ +DATLLHW VNEGH+PTV+HLLACGADV
Sbjct:    1 MNLFRSRVDVFEAINKGDWQKVKDNVVPGKANARDSQYDATLLHWAVNEGHMPTVEHLLACGADV 65
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BLAST of mRNA_S-dermatodea_contig11500.972.1 vs. uniprot
Match: A0A6H5KWH5_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH5_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.090e-24
Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 0 
Query:    1 MSVWRGPVDVFEAIDRRDWQTVKDAVMPGKANLRDAHHDATLLHWVVNEGHVPTVQHLLACGADV 65
            M+++R  VDVFEAI++ DWQ VKD V+PGKAN RD+ +DATLLHW VNEGH+PTV+HLLACGADV
Sbjct:    1 MNLFRSRVDVFEAINKGDWQKVKDNVVPGKANARDSQYDATLLHWAVNEGHMPTVEHLLACGADV 65
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11500.972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LI69_ECTSI9.590e-2572.31U-box domain containing protein, expressed n=1 Tax... [more]
A0A6H5KWH5_9PHAE1.090e-2472.31Protein kinase domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13637Ank_4coord: 41..93
e-value: 2.8E-7
score: 30.9
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 13..94
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 7..94
e-value: 4.2E-18
score: 67.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 32..93
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 38..94
score: 17.449
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 72..94
score: 9.217
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 38..70
score: 10.472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11500contigS-dermatodea_contig11500:1500..4721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11500.972.1mRNA_S-dermatodea_contig11500.972.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11500 1500..4742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11500.972.1 ID=prot_S-dermatodea_contig11500.972.1|Name=mRNA_S-dermatodea_contig11500.972.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=94bp
MSVWRGPVDVFEAIDRRDWQTVKDAVMPGKANLRDAHHDATLLHWVVNEG
HVPTVQHLLACGADVHSRDGKHFASPLHWAAAKGHVVAVRLLLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt