prot_S-dermatodea_contig11490.967.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig11490.967.1
Unique Nameprot_S-dermatodea_contig11490.967.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length347
Homology
BLAST of mRNA_S-dermatodea_contig11490.967.1 vs. uniprot
Match: D8LTI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTI8_ECTSI)

HSP 1 Score: 129 bits (325), Expect = 1.320e-29
Identity = 169/377 (44.83%), Postives = 187/377 (49.60%), Query Frame = 0
Query:    1 MSKKEEQLLSPEDHERLAAGALESDILRDRAYGGGASGGGDSEGTISDSENSTTGDPDAEYAFGNSNGGDDEHGGSANEGLLGERAATVEAISARSPH----------------SPVSSGGSQDGDVSDPEGRGRRGSCCVDGEMRDDERGPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSLHSPHRFFSPMEDDTSPPGSPSAISP-RRFTSPSGRRSXXXXXXXXXPGSSRSGSVADGHVMFESG-SLDRR--DAVCRPPLAHSAWGQRRRTPH------DPSSSR----WEDNPMDERRLDSMSHRAAADRMNGRGGGRDDVQGMGMG 347
            MSKKEEQLLS EDHERLAA ALESD+LR R YG GA  GGDSEGTISDSENSTTGD D  Y   +                                                 S  +  GS+DG   + + R +  S          + GP +S                                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSS+HSP R FSPMED +      S ++P RRFTSPSGRRS         PGSSRSGSVADGHVMFESG S D+   D VCRPPLAH+ WG      H      D S SR    WE      R     SH A      GRGG  + ++G G G
Sbjct:  131 MSKKEEQLLSLEDHERLAAAALESDVLRGRGYGSGA--GGDSEGTISDSENSTTGDLDGGYQSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDASETAXAGSEDGKRKEGDARAKERS-------NPQQNGPRTS--------------------LKNNSGAPNNLSDSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSIHSPQRCFSPMEDSSPLGAQSSTMAPQRRFTSPSGRRSPPRSPSVSSPGSSRSGSVADGHVMFESGESSDQSHGDTVCRPPLAHNPWGNHHEHQHQQPWELDASGSREKPRWESGRG--RINGGGSHAAGDPARRGRGGRVEGLRGRGRG 476          
BLAST of mRNA_S-dermatodea_contig11490.967.1 vs. uniprot
Match: A0A6H5K7H2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7H2_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 1.720e-29
Identity = 156/313 (49.84%), Postives = 169/313 (53.99%), Query Frame = 0
Query:    1 MSKKEEQLLSPEDHERLAAGALESDILRDRAYGGGASGGGDSEGTISDSENSTTGDPDAEYAFGNSNGGDDEHGGSANEGLLGERAATVEAISARS-PHSPVSSGGSQDGD------VSDPEGRGRRGSCCVDGEMRDDERGPLSSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSLHSPHRFFSPMEDDTSPPGSPSAISP-RRFTSPSGRRSXXXXXXXXXPGSSRSGSVADGHVMFESG-SLDR--RDAVCRPPLAHSAWGQRRRTPH 302
            MSKKEEQLLS EDHERLAA ALESD+LR R YG GA  GGDSEGTISDSENSTTGD D  Y   +                                P+S        DGD      V+  E   R+     +G+ R  ER  L                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSS+HSP R FSPME  +      SA++P RRFTSPSGRRS         PGSSRSGSVADGHVMFESG S D+  RD VCRPPLAH+ WG      H
Sbjct:  976 MSKKEEQLLSLEDHERLAAAALESDVLRGRGYGSGA--GGDSEGTISDSENSTTGDLDGGYQSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPNSXXXXXXXXDGDDASETAVARSEDDKRK-----EGDARAKERSSLQQ--------------NGPRTSLKNNSGAPNNLSDSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSIHSPQRCFSPMEGGSPLGAQSSAMAPQRRFTSPSGRRSPPRSPSVSSPGSSRSGSVADGHVMFESGESSDQSHRDTVCRPPLAHNPWGHHHEHQH 1267          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11490.967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTI8_ECTSI1.320e-2944.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7H2_9PHAE1.720e-2949.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11490contigS-dermatodea_contig11490:4827..6890 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11490.967.1mRNA_S-dermatodea_contig11490.967.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig11490 4827..6908 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig11490.967.1 ID=prot_S-dermatodea_contig11490.967.1|Name=mRNA_S-dermatodea_contig11490.967.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=347bp
MSKKEEQLLSPEDHERLAAGALESDILRDRAYGGGASGGGDSEGTISDSE
NSTTGDPDAEYAFGNSNGGDDEHGGSANEGLLGERAATVEAISARSPHSP
VSSGGSQDGDVSDPEGRGRRGSCCVDGEMRDDERGPLSSPRGSPRGRPRD
SPRSSPRNSPRNSPRNTPQSSPPHSTEGSLQNSPDNSPQNSPRNHKRGPG
SEGGSESGCSSLHSPHRFFSPMEDDTSPPGSPSAISPRRFTSPSGRRSPP
GSPTVSSPGSSRSGSVADGHVMFESGSLDRRDAVCRPPLAHSAWGQRRRT
PHDPSSSRWEDNPMDERRLDSMSHRAAADRMNGRGGGRDDVQGMGMG
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