mRNA_S-dermatodea_contig11393.899.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-dermatodea_contig11393.899.1
Unique NamemRNA_S-dermatodea_contig11393.899.1
TypemRNA
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Homology
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: D7G234_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G234_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 1.140e-87
Identity = 140/204 (68.63%), Postives = 170/204 (83.33%), Query Frame = 1
Query:  484 QMQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSSVPK 1095
            +++EQTRQAAARGDAAVTPLADL+   +LD+ G +  ++T GVKASVYA+YDE K L+YIGVSRG+QQSLRL LAR P +T++FKVQNI RPSRSLLEIIK+SWIEENGS P GN +   QA WE+ +NV+P FTEED A+VA  KEKG+E+ G+K +A RFE  I++ILEERGVKE + FDPKLKG+GLLD+ MPKPDSSVPK
Sbjct:   89 KIKEQTRQAAARGDAAVTPLADLEFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPKDTYYFKVQNITRPSRSLLEIIKESWIEENGSTPDGNADEASQAVWEHAINVVPLFTEEDLAVVAEWKEKGKEDRGLKKIAGRFENEILEILEERGVKESIRFDPKLKGRGLLDVKMPKPDSSVPK 292          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A836CJ14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ14_9STRA)

HSP 1 Score: 234 bits (596), Expect = 9.000e-69
Identity = 119/194 (61.34%), Postives = 144/194 (74.23%), Query Frame = 1
Query:  514 ARGDAAVTPLADLDLTPYLDEKGMITKVETA-GVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSSVP 1092
            +RGD AV PL+ L + PYL+E+G+++ V  A GVKASVYA+YD    LQYIGVSR +QQSLRLHLAR P  TH  +VQ+I  PSRSLLE+IKD W  ENG  P GND G  QA WE P++V P  TEEDK  +   +EKGRE++ IKA+ARRFE   V+I+E RGVKE + FDPKLKG+GLLDL  P PD+SVP
Sbjct:   79 SRGDTAVDPLSSLPMIPYLNEEGLVSDVGAARGVKASVYAVYDATPALQYIGVSRSVQQSLRLHLARCPELTHSVRVQHITTPSRSLLEVIKDEWCAENGGAPPGNDGGAEQARWEMPMDVKPLMTEEDKEKLMTAREKGREDSAIKAIARRFEAAKVEIMEARGVKENMRFDPKLKGQGLLDLWQPGPDTSVP 272          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A0G4GGJ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GGJ4_VITBC)

HSP 1 Score: 191 bits (484), Expect = 6.530e-53
Identity = 100/204 (49.02%), Postives = 140/204 (68.63%), Query Frame = 1
Query:  484 QMQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVE-TAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSSVP 1092
            +++ +T +  A GD ++  L+ L L PYL   G +T  + T GVKASVYAIYDE K LQ++GV+R ++QSL LHLAR P  TH+ KV +I RP+RSLLE+IK SW++E+G++P GN   + Q  WE+PL++ P  T+ED+   A K++KG+       VARR+E    ++LE R V E++ FDPKLK +GL DLL+PKP   VP
Sbjct:   27 RLKAETDRLRASGDVSIPSLSSLPLMPYLTPDGKVTSADVTPGVKASVYAIYDEGKTLQHVGVTRSIRQSLLLHLARMPQLTHYVKVHHILRPNRSLLELIKQSWLDESGNIPPGNRPPD-QELWEHPLDIKPLMTDEDRERYAEKEQKGKGFNVYLEVARRYEAEKKEVLEARHVTEEVRFDPKLKRQGLSDLLIPKPKDEVP 229          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A176W0C8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0C8_MARPO)

HSP 1 Score: 183 bits (465), Expect = 5.410e-49
Identity = 100/202 (49.50%), Postives = 133/202 (65.84%), Query Frame = 1
Query:  493 EQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDL--LMPKPDSSVP 1092
            EQ RQ A  G   V  L  ++ TPYL E+G+I  +    +KASVYAI+D+ K LQY+GV+R + QS+RLH AR PS+  + KVQ+++RPSR+LLE I+D WI +NGS P GND GE Q  WENPL+     T+E+  L+        + A +K VARR E  ++   EER   +KL F+PKLK +GLLDL  ++ KPDSSVP
Sbjct:  124 EQRRQQAGAG--LVEKLDSMEYTPYLTEEGLIADITKPDIKASVYAIFDDAKTLQYVGVTRQVYQSMRLHFARFPSKCFYVKVQHLSRPSRALLEGIRDQWIADNGSPPPGNDNGEMQNRWENPLDCKVFMTDEEMRLLEEAAPGPPKAAVLKNVARRIEKTLMAAFEERKCTDKLRFEPKLKDRGLLDLKGVVIKPDSSVP 323          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A388KW50_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KW50_CHABU)

HSP 1 Score: 184 bits (466), Expect = 1.380e-48
Identity = 98/205 (47.80%), Postives = 134/205 (65.37%), Query Frame = 1
Query:  484 QMQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPK--PDSSVP 1092
            ++Q+Q +++    D +V  L DL+  PY+ E+G I     AG KASV+A++DE K LQY+G+SR + QS+RLH AR PS+ HF KV +IA PSR++LE I+ +WI EN + P GND GE Q  WEN L+  P  T+E+K L+   +E  +    +K VARR E  +V+  + R V E L FDPKLK KGLLDL   +  PD+SVP
Sbjct:  174 RLQQQHQRSGTGADKSVVRLRDLEYQPYVTEEGKIVDCTKAGAKASVFAVFDEDKTLQYVGMSRQVYQSMRLHFARMPSKCHFVKVVHIASPSRAVLESIQTAWITENDTRPPGNDGGEIQHLWENALDCKPLMTDEEKELIEKTEEGPKRARTLKNVARRIESQLVEQFKLRNVSETLRFDPKLKEKGLLDLKSTQYVPDTSVP 378          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A4D9CSA1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSA1_9STRA)

HSP 1 Score: 179 bits (454), Expect = 5.350e-48
Identity = 102/198 (51.52%), Postives = 130/198 (65.66%), Query Frame = 1
Query:  514 ARGDAA--VTPLADLDLTPYLDEKGMITKVET-AGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGR-EEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPK-PDSSVP 1092
            A  D A  + PL  L   PYLDE G I      A VKASVYA+YDE + ++YIGVSR + QSLRLHLAR P +T+ F+V +I++P+R LLEI +D+W+++ G  P+GND G  Q  WE+ L+V P   E D A +   + K R EE  +K V RRFE   + +L  RGV E L FDPKLKGKGLLDL + K PDS+VP
Sbjct:   82 ANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVAQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVP 279          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: K8YTT3_NANGC (Protein atypical group n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTT3_NANGC)

HSP 1 Score: 179 bits (454), Expect = 4.790e-46
Identity = 102/198 (51.52%), Postives = 130/198 (65.66%), Query Frame = 1
Query:  514 ARGDAA--VTPLADLDLTPYLDEKGMITKVET-AGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGR-EEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPK-PDSSVP 1092
            A  D A  + PL  L   PYLDE G I      A VKASVYA+YDE + ++YIGVSR + QSLRLHLAR P +T+ F+V +I++P+R LLEI +D+W+++ G  P+GND G  Q  WE+ L+V P   E D A +   + K R EE  +K V RRFE   + +L  RGV E L FDPKLKGKGLLDL + K PDS+VP
Sbjct:   82 ANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVP 279          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A7S2WPP4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPP4_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.950e-44
Identity = 89/203 (43.84%), Postives = 127/203 (62.56%), Query Frame = 1
Query:  484 QMQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVET-AGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSSV 1089
            Q+  +  Q  +   A++  L  +D  PYL ++G I+  +  +G +ASVYAIYD  + L+++G+SR + QSLRLHL R P   +F+K  ++  PSR LLE ++++WI ENG  P GND     ++WE P +V    TEED+  +   ++ GRE+  IK VARRFE   V +L+ RGV E L FDPKLKGKGLLDL+  K  +  
Sbjct:   84 QLHARAHQRGSVELASLPSLDSIDSRPYLTDEGKISSADPPSGTRASVYAIYDTHEHLRFVGISRDISQSLRLHLGRQPELCYFYKAMHMQSPSRMLLESVRENWIAENGVCPDGNDGEGALSTWEKPTDVNGLMTEEDRNAIDEARQIGREDGAIKKVARRFETQKVDVLKARGVTENLRFDPKLKGKGLLDLISEKKSAQT 286          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A1Y1IDT5_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDT5_KLENI)

HSP 1 Score: 169 bits (429), Expect = 3.920e-44
Identity = 99/206 (48.06%), Postives = 124/206 (60.19%), Query Frame = 1
Query:  496 QTRQAAAR----GDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLL--MPKPDSSVPK 1095
            + RQAAAR    G A VTPLA+L L P+L E+G I     A  KASVYAI+DE KV++++G+SR +  SLRLH AR P +    KVQ+I  P RS LE I+D+WI E G  P GND G  Q  WENPL+V P  T+++KA V            +K VARR E  +      R   E L FDPKLK KG+LD+    P PD+ VP+
Sbjct:  102 ERRQAAARRAGRGAAPVTPLAELPLVPFLTEEGKIADCSQADAKASVYAIFDEEKVVRHVGISRAIGPSLRLHFARVPLQCWAVKVQHIKAPRRSALEAIRDAWIAELGYRPTGNDNGPEQNRWENPLDVRPLMTDDEKAAVEEAAPGPPTAKALKQVARRVEAELKASYAARQSTESLRFDPKLKEKGMLDVKNPAPPPDTKVPE 307          
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A2K1K7G9_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7G9_PHYPA)

HSP 1 Score: 165 bits (418), Expect = 2.860e-43
Identity = 92/203 (45.32%), Postives = 129/203 (63.55%), Query Frame = 1
Query:  490 QEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDL--LMPKPDSSVP 1092
            Q+  R+ + +G   V+ L+ L+  PYL E+G I      G KAS+YAI+DE K L +IG+SR + QS+RLH AR P + ++ KV ++++PSR+LLE  +D+WI ENGSVP GND GE Q  WEN L+  P  T+E+K L         +   +K VARR E ++  I ++R   + L FDPKLK + LLDL  +  KPD+SVP
Sbjct:   48 QDALRRQSMQGGEGVS-LSSLEYIPYLTEEGHIADCTEPGAKASLYAIFDENKTLCFIGISRQVYQSMRLHFARRPLQCYYVKVMHVSKPSRALLEGTRDAWISENGSVPVGNDNGEIQNLWENALDCTPFMTDEEKLLHEEAAPGPPKAKVLKNVARRIEKDLEGIFKQRNCTDVLRFDPKLKDRCLLDLKGVAVKPDTSVP 249          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G234_ECTSI1.140e-8768.63Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ14_9STRA9.000e-6961.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0G4GGJ4_VITBC6.530e-5349.02Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A176W0C8_MARPO5.410e-4949.50Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A388KW50_CHABU1.380e-4847.80Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A4D9CSA1_9STRA5.350e-4851.52Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
K8YTT3_NANGC4.790e-4651.52Protein atypical group n=1 Tax=Nannochloropsis gad... [more]
A0A7S2WPP4_9STRA2.950e-4443.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Y1IDT5_KLENI3.920e-4448.06Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A2K1K7G9_PHYPA2.860e-4345.32Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig11393contigS-dermatodea_contig11393:2642..6471 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score282.3
Seed ortholog evalue1.7e-73
Seed eggNOG ortholog2880.D7G234
EggNOG OGs28NP8@1,2S5YX@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_003660.1
Exons6
Model size1436
Cds size612
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924201.2270496-UTR-S-dermatodea_contig11393:2641..27021622924201.2270496-UTR-S-dermatodea_contig11393:2641..2702Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11393 2642..2702 +
1694079088.4296203-UTR-S-dermatodea_contig11393:2641..27021694079088.4296203-UTR-S-dermatodea_contig11393:2641..2702Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11393 2642..2702 +
1622924201.2959366-UTR-S-dermatodea_contig11393:5708..64711622924201.2959366-UTR-S-dermatodea_contig11393:5708..6471Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11393 5709..6471 +
1694079088.4803922-UTR-S-dermatodea_contig11393:5708..64711694079088.4803922-UTR-S-dermatodea_contig11393:5708..6471Saccorhiza dermatodea SderLu1190fm monoicousUTRS-dermatodea_contig11393 5709..6471 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622924201.2409534-CDS-S-dermatodea_contig11393:3127..32831622924201.2409534-CDS-S-dermatodea_contig11393:3127..3283Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 3128..3283 +
1694079088.441444-CDS-S-dermatodea_contig11393:3127..32831694079088.441444-CDS-S-dermatodea_contig11393:3127..3283Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 3128..3283 +
1622924201.2517512-CDS-S-dermatodea_contig11393:4259..43551622924201.2517512-CDS-S-dermatodea_contig11393:4259..4355Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 4260..4355 +
1694079088.449413-CDS-S-dermatodea_contig11393:4259..43551694079088.449413-CDS-S-dermatodea_contig11393:4259..4355Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 4260..4355 +
1622924201.2627249-CDS-S-dermatodea_contig11393:4600..47081622924201.2627249-CDS-S-dermatodea_contig11393:4600..4708Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 4601..4708 +
1694079088.4570048-CDS-S-dermatodea_contig11393:4600..47081694079088.4570048-CDS-S-dermatodea_contig11393:4600..4708Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 4601..4708 +
1622924201.2741182-CDS-S-dermatodea_contig11393:4978..51191622924201.2741182-CDS-S-dermatodea_contig11393:4978..5119Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 4979..5119 +
1694079088.4647295-CDS-S-dermatodea_contig11393:4978..51191694079088.4647295-CDS-S-dermatodea_contig11393:4978..5119Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 4979..5119 +
1622924201.2853975-CDS-S-dermatodea_contig11393:5597..57081622924201.2853975-CDS-S-dermatodea_contig11393:5597..5708Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 5598..5708 +
1694079088.472505-CDS-S-dermatodea_contig11393:5597..57081694079088.472505-CDS-S-dermatodea_contig11393:5597..5708Saccorhiza dermatodea SderLu1190fm monoicousCDSS-dermatodea_contig11393 5598..5708 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig11393.899.1prot_S-dermatodea_contig11393.899.1Saccorhiza dermatodea SderLu1190fm monoicouspolypeptideS-dermatodea_contig11393 3128..5708 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-dermatodea_contig11393.899.1

>prot_S-dermatodea_contig11393.899.1 ID=prot_S-dermatodea_contig11393.899.1|Name=mRNA_S-dermatodea_contig11393.899.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=204bp
MQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIY
DEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIK
DSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGRE
EAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSS
VPK*
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mRNA from alignment at S-dermatodea_contig11393:2642..6471+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-dermatodea_contig11393.899.1 ID=mRNA_S-dermatodea_contig11393.899.1|Name=mRNA_S-dermatodea_contig11393.899.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3830bp|location=Sequence derived from alignment at S-dermatodea_contig11393:2642..6471+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATACGTGAAGGCGGAACTGGCTAGGGTGCAGGAGGAGTACGAGGCCAACC GGAAGGCCAAGGTGCGTGAGGCCGTTCTGGTGTTGGAAATCAACGAAGAG GGATACACCCCCCTCACGTTTGGGACAACAAGGGTTGCATGTGTTTTTTT GTTGTGGGAAGATGGATGGGCTAGTCAAATTTGAGAGCCTTGTTTTCGTC CTCAGCCCCACTCATGGCTCTTCTCCGGAAACCGTTACTTGTTATTTTCG GACACCATGGCAACAACGATAGGTCCCCACGTCCCTAAAATAGTGGACGG CGTACCCCTGTCCGTCCACTTATGTCCCCTCGTATGGCCAACCACCGAGC CTCGCAGGAATCCTAACCCTAGCCCTTGCGGGAAATTACGAAAATGGCAG GCGGTGTGAGCTTGCAGTTCTTGCCATTTGTACAAGTATTTAGTTGAAGT GTTGACGCGAGAGCACCTATCGGGACCCTCTTACAGATGCAGGAGCAGAC GAGGCAAGCGGCAGCTCGAGGCGACGCTGCCGTAACTCCTCTTGCCGACT TGGACCTCACACCCTACTTGGACGAAAAGGGGATGATAACGAAGGTGGAA ACTGCGGGAGTCAAGGCCAGCGTCTACGCAATCTACGACGAGGTCAGTAA GCCCAGCTTACCGCATTGATTTACATTTTCGGGTGAGCTAGAACTGGGCT AACACAGGCGACGTGTACCGGCAGCTCCAGCTTCACTCATACGGGGTCAT ACGTCTAATGGAAAAAGCTATGATGCTTATGGGCCGAATATGTCATGTAT GGAGGAGGGATTCGCGTATTTTGCTGGCCTTTTGACGGAGCCCAGACCGT GAGTCTAGGGAATGTGCTGAATCGTACGCAATTGGGATATTGTACTAAGT GTTGGCCATTCGTGTCCCGCGTTTTCCATCCGCGCGTACTTGCGCATGTC TTCTGCTGCAATATGAAAGCGTTGTCACCACCCTGCTCTGTTTTCCTTTT TTCTAGCTGTTTCCGCTGCTCGCTCAACATTGCATCAAGGGTAGTACCTG TAGCTGCTGTTGCTTCTGCTGTCTGTAGAGGGGCTCTGGCAAAGTAGTGG TCCTCCTTGTTGCGCTGAACCGGCGGGATCCTACACGCAAGTCCGTGCGG CAGTGATCGTTGCTGTTGCGCTTTGTGCGATCGACGCGGGTGTACGGCCC ACCGCTGGGCTGAACGAAACCCGTGGTTATTCCGTCCACTTCTCGATACA AGGTGTTCTTCCCAGCCACAACGACCACAACTGCCGTAGTTATATTCAGG AGTGAGGAGGCAGCTAGGCATGCCTGGTCCAGAAGGAAAACATTTCACCG GTCCAACGGCCGGGCCTCTTGTTCCGTTGTACCTCGTAGTCTCAAACCTA GATTTGCCTGTGCTCATATTACAACGACAGAGTTTTGAGTGGGCCCGGTC GATTGAAAGTTGAAAGCGTTGTGAACTTGTAGACTGAACAAATGCAGTCA TGAAACACATATCCAATGCATTGCCCATATCCTAGACGTACCTTCGGGTA GGCTACTGCTGGAATTAACACCGCGACCCCCTTCGCATCACCCAATGCCG TTGATGGATGAATTGCAGGTCAAGGTGCTGCAATATATTGGTGTATCCCG CGGGCTTCAGCAGAGCCTACGCCTTCACCTCGCTCGCAGTCCCTCTGAGA CCCACTTCTTTAAGGTGACCAAACTTGTTTTTGCGCAATTCGACCGCTAG CATAGGCTCTTGGAGCGTTATCGAGCTCACCTGTCAACGAGACCTTAAGC AACGCATTCAAGACGGCAGCAGCCCATGCATGGGAATTATCGTTACGCAC TCCAATATCTAGAGTTGAGTAACAATTGCCTCTCATTCTTCCGTGCGGGT TCCGCGCCAGCAGTGCGTCACAAGAAAAACAAGAGCTGTCACTTCTTGCT TCGCCGCAGGTGCAAAATATCGCCCGACCCAGCAGATCTCTGCTAGAGAT CATCAAGGATTCATGGATTGAGGAGAACGGCTCTGTACCCAAGGGCAATG ACGAGGGAGAGTTCCAGGTAGGGCGGGGTGCGGCGGATCGTCCACTTAAT TGAGCGTTGTCTTGAACGTGGTTGAGTTACCCAACATCGATGTAAGCACG CAAACCAATTCCTTGCGGCCACGCGCTTGAATTTCAGCTCTTGTAGTTGC CCAGCGGTCCAGGTGTTGTCCCAACGGTGTTTTGAGGTTGACTCCACTGT AAATGGACAGGTCAACAAAGTTAGGGCACGTAAGAAACGAATGACGAGTG TTGACCATGGCGTTGGCGACCAATGTCGACCCTGCAGGCTAGCTGGGAAA ATCCGTTGAACGTTATCCCCAAGTTCACGGAGGAGGACAAGGCACTGGTG GCAGCGAAAAAGGAGAAAGGCAGAGAAGAAGCGGGCATCAAGGCAGTGGC CCGCCGGTTCGAGGGCAATATTGTCAAGGTGCGCTATCTTCTTGTAGAGG GTCCTGAGTGCGTTTTTATAGCTCTTGCAAGATGGCGCACGAAACCCCGT CTTCCGATTTCGCGCAGATGATTAAGAGGACTCGCCGTTGCATCTGCGGT TGAGGTGCTGGCTCCACTTGGTGTCAACTGTGACCTGATGGTATATATTG GTATGCTTGTTGCGAAGCCAGTCGTCGTTGGGCCTTATGAACCAGCTCGG TTGCCGTTCTTGGCAATAGATACCCAAGTCAAGAATGTTGACTGTTATTT TGTGTTGTACGTTACGTATACGGGAAGCGATGTGTTTGTGGATATCCGAG AGCCTGACAGGCTAATGTGTTTGTGTGGTTCTTGTAGTGGTGTTTGCGAC GGATGCTTTTCGCGTCGCCATTTCGACGAGAATCTTCGAGAACCTTGCCT TACCCCAGTTTTACCCTTGCGTCCTTCCGCCGGTTTGTTGTGTTTTGTCG CTGCAGATTCTTGAGGAGCGGGGTGTGAAGGAAAAACTGTTGTTCGATCC CAAGTTGAAGGGCAAGGGGCTGCTGGATCTGCTCATGCCAAAGCCCGACA GCTCGGTGCCAAAGTGATGCTTCCACATTCACGGACGTTGCGAGATCCTT TGGGCAGCGTAGTTTTGCTTTGCAAGGTTTCACGCATGTACTCTCAGCCC CCTGTTCATCACGCCATTAAGAGAGGCGAAGTACAAGTAAGTACAAGTGC TGTAGATAGCGACAGTCACGGGCGGACGCGTAAGCAACACTGATCGGTGC CAATGCAGGACATCACCGAGTGCTGCCGTAAAGGCGAAGGACGTAGCCTG GCCAATGTCCTAGGTCACTGTTGTCAGTTAAGCCTGGTTTACATGCGAGA TACGACAGTGTGGAGCAATTTATACGTTTGGGATTGGCCGATTGAGCACT TGTGTCATGGGCAAACCCTTTCCATTATGCAAGAAATTCTCCGATTGATG AACCAACAGCGCAACGTACGGGGGTGTTGTTTGAATATGAAGACGGAGAA GGCGATACACTCTTTGGCCACAATGTATTGGCTGAAATATGTTTCATTTC TGAAGAGAGTACATTGACTGCTGTCGAGAGGAAATAATAGAGGACAGTTT TTATCCGACAAGCGACATTCAGCACGCCATGCCTTGCGAGGTACCTGGTA GAAGTTTACAAGTGGGGGTGTTACGGGATCCCACTACTGTTTATTTGCCG TATGGTGCACCATCGTCTTATGGCGGCCAAAAATTATGCATAAGAAAATG GCCCATAACGTGCTTAGAAACGTCTGCCGCTTTTGAACACAGTAGTAGTA GCACATGGGAACAAAGCTGGCACACGAACC
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Coding sequence (CDS) from alignment at S-dermatodea_contig11393:2642..6471+

>mRNA_S-dermatodea_contig11393.899.1 ID=mRNA_S-dermatodea_contig11393.899.1|Name=mRNA_S-dermatodea_contig11393.899.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at S-dermatodea_contig11393:2642..6471+ (Saccorhiza dermatodea SderLu1190fm monoicous)
ATGCAGGAGCAGACGAGGCAAGCGGCAGCTCGAGGCGACGCTGCCGTAAC
TCCTCTTGCCGACTTGGACCTCACACCCTACTTGGACGAAAAGGGGATGA
TAACGAAGGTGGAAACTGCGGGAGTCAAGGCCAGCGTCTACGCAATCTAC
GACGAGATGCAGGAGCAGACGAGGCAAGCGGCAGCTCGAGGCGACGCTGC
CGTAACTCCTCTTGCCGACTTGGACCTCACACCCTACTTGGACGAAAAGG
GGATGATAACGAAGGTGGAAACTGCGGGAGTCAAGGCCAGCGTCTACGCA
ATCTACGACGAGGTCAAGGTGCTGCAATATATTGGTGTATCCCGCGGGCT
TCAGCAGAGCCTACGCCTTCACCTCGCTCGCAGTCCCTCTGAGACCCACT
TCTTTAAGGTCAAGGTGCTGCAATATATTGGTGTATCCCGCGGGCTTCAG
CAGAGCCTACGCCTTCACCTCGCTCGCAGTCCCTCTGAGACCCACTTCTT
TAAGGTGCAAAATATCGCCCGACCCAGCAGATCTCTGCTAGAGATCATCA
AGGATTCATGGATTGAGGAGAACGGCTCTGTACCCAAGGGCAATGACGAG
GGAGAGTTCCAGGTGCAAAATATCGCCCGACCCAGCAGATCTCTGCTAGA
GATCATCAAGGATTCATGGATTGAGGAGAACGGCTCTGTACCCAAGGGCA
ATGACGAGGGAGAGTTCCAGGCTAGCTGGGAAAATCCGTTGAACGTTATC
CCCAAGTTCACGGAGGAGGACAAGGCACTGGTGGCAGCGAAAAAGGAGAA
AGGCAGAGAAGAAGCGGGCATCAAGGCAGTGGCCCGCCGGTTCGAGGGCA
ATATTGTCAAGGCTAGCTGGGAAAATCCGTTGAACGTTATCCCCAAGTTC
ACGGAGGAGGACAAGGCACTGGTGGCAGCGAAAAAGGAGAAAGGCAGAGA
AGAAGCGGGCATCAAGGCAGTGGCCCGCCGGTTCGAGGGCAATATTGTCA
AGATTCTTGAGGAGCGGGGTGTGAAGGAAAAACTGTTGTTCGATCCCAAG
TTGAAGGGCAAGGGGCTGCTGGATCTGCTCATGCCAAAGCCCGACAGCTC
GGTGCCAAAGTGAATTCTTGAGGAGCGGGGTGTGAAGGAAAAACTGTTGT
TCGATCCCAAGTTGAAGGGCAAGGGGCTGCTGGATCTGCTCATGCCAAAG
CCCGACAGCTCGGTGCCAAAGTGA
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