mRNA_S-dermatodea_contig11393.899.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: D7G234_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G234_ECTSI) HSP 1 Score: 283 bits (725), Expect = 1.140e-87 Identity = 140/204 (68.63%), Postives = 170/204 (83.33%), Query Frame = 1
Query: 484 QMQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSSVPK 1095
+++EQTRQAAARGDAAVTPLADL+ +LD+ G + ++T GVKASVYA+YDE K L+YIGVSRG+QQSLRL LAR P +T++FKVQNI RPSRSLLEIIK+SWIEENGS P GN + QA WE+ +NV+P FTEED A+VA KEKG+E+ G+K +A RFE I++ILEERGVKE + FDPKLKG+GLLD+ MPKPDSSVPK
Sbjct: 89 KIKEQTRQAAARGDAAVTPLADLEFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPKDTYYFKVQNITRPSRSLLEIIKESWIEENGSTPDGNADEASQAVWEHAINVVPLFTEEDLAVVAEWKEKGKEDRGLKKIAGRFENEILEILEERGVKESIRFDPKLKGRGLLDVKMPKPDSSVPK 292
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A836CJ14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ14_9STRA) HSP 1 Score: 234 bits (596), Expect = 9.000e-69 Identity = 119/194 (61.34%), Postives = 144/194 (74.23%), Query Frame = 1
Query: 514 ARGDAAVTPLADLDLTPYLDEKGMITKVETA-GVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSSVP 1092
+RGD AV PL+ L + PYL+E+G+++ V A GVKASVYA+YD LQYIGVSR +QQSLRLHLAR P TH +VQ+I PSRSLLE+IKD W ENG P GND G QA WE P++V P TEEDK + +EKGRE++ IKA+ARRFE V+I+E RGVKE + FDPKLKG+GLLDL P PD+SVP
Sbjct: 79 SRGDTAVDPLSSLPMIPYLNEEGLVSDVGAARGVKASVYAVYDATPALQYIGVSRSVQQSLRLHLARCPELTHSVRVQHITTPSRSLLEVIKDEWCAENGGAPPGNDGGAEQARWEMPMDVKPLMTEEDKEKLMTAREKGREDSAIKAIARRFEAAKVEIMEARGVKENMRFDPKLKGQGLLDLWQPGPDTSVP 272
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A0G4GGJ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GGJ4_VITBC) HSP 1 Score: 191 bits (484), Expect = 6.530e-53 Identity = 100/204 (49.02%), Postives = 140/204 (68.63%), Query Frame = 1
Query: 484 QMQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVE-TAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSSVP 1092
+++ +T + A GD ++ L+ L L PYL G +T + T GVKASVYAIYDE K LQ++GV+R ++QSL LHLAR P TH+ KV +I RP+RSLLE+IK SW++E+G++P GN + Q WE+PL++ P T+ED+ A K++KG+ VARR+E ++LE R V E++ FDPKLK +GL DLL+PKP VP
Sbjct: 27 RLKAETDRLRASGDVSIPSLSSLPLMPYLTPDGKVTSADVTPGVKASVYAIYDEGKTLQHVGVTRSIRQSLLLHLARMPQLTHYVKVHHILRPNRSLLELIKQSWLDESGNIPPGNRPPD-QELWEHPLDIKPLMTDEDRERYAEKEQKGKGFNVYLEVARRYEAEKKEVLEARHVTEEVRFDPKLKRQGLSDLLIPKPKDEVP 229
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A176W0C8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0C8_MARPO) HSP 1 Score: 183 bits (465), Expect = 5.410e-49 Identity = 100/202 (49.50%), Postives = 133/202 (65.84%), Query Frame = 1
Query: 493 EQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDL--LMPKPDSSVP 1092
EQ RQ A G V L ++ TPYL E+G+I + +KASVYAI+D+ K LQY+GV+R + QS+RLH AR PS+ + KVQ+++RPSR+LLE I+D WI +NGS P GND GE Q WENPL+ T+E+ L+ + A +K VARR E ++ EER +KL F+PKLK +GLLDL ++ KPDSSVP
Sbjct: 124 EQRRQQAGAG--LVEKLDSMEYTPYLTEEGLIADITKPDIKASVYAIFDDAKTLQYVGVTRQVYQSMRLHFARFPSKCFYVKVQHLSRPSRALLEGIRDQWIADNGSPPPGNDNGEMQNRWENPLDCKVFMTDEEMRLLEEAAPGPPKAAVLKNVARRIEKTLMAAFEERKCTDKLRFEPKLKDRGLLDLKGVVIKPDSSVP 323
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A388KW50_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KW50_CHABU) HSP 1 Score: 184 bits (466), Expect = 1.380e-48 Identity = 98/205 (47.80%), Postives = 134/205 (65.37%), Query Frame = 1
Query: 484 QMQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPK--PDSSVP 1092
++Q+Q +++ D +V L DL+ PY+ E+G I AG KASV+A++DE K LQY+G+SR + QS+RLH AR PS+ HF KV +IA PSR++LE I+ +WI EN + P GND GE Q WEN L+ P T+E+K L+ +E + +K VARR E +V+ + R V E L FDPKLK KGLLDL + PD+SVP
Sbjct: 174 RLQQQHQRSGTGADKSVVRLRDLEYQPYVTEEGKIVDCTKAGAKASVFAVFDEDKTLQYVGMSRQVYQSMRLHFARMPSKCHFVKVVHIASPSRAVLESIQTAWITENDTRPPGNDGGEIQHLWENALDCKPLMTDEEKELIEKTEEGPKRARTLKNVARRIESQLVEQFKLRNVSETLRFDPKLKEKGLLDLKSTQYVPDTSVP 378
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A4D9CSA1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSA1_9STRA) HSP 1 Score: 179 bits (454), Expect = 5.350e-48 Identity = 102/198 (51.52%), Postives = 130/198 (65.66%), Query Frame = 1
Query: 514 ARGDAA--VTPLADLDLTPYLDEKGMITKVET-AGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGR-EEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPK-PDSSVP 1092
A D A + PL L PYLDE G I A VKASVYA+YDE + ++YIGVSR + QSLRLHLAR P +T+ F+V +I++P+R LLEI +D+W+++ G P+GND G Q WE+ L+V P E D A + + K R EE +K V RRFE + +L RGV E L FDPKLKGKGLLDL + K PDS+VP
Sbjct: 82 ANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVAQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVP 279
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: K8YTT3_NANGC (Protein atypical group n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTT3_NANGC) HSP 1 Score: 179 bits (454), Expect = 4.790e-46 Identity = 102/198 (51.52%), Postives = 130/198 (65.66%), Query Frame = 1
Query: 514 ARGDAA--VTPLADLDLTPYLDEKGMITKVET-AGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGR-EEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPK-PDSSVP 1092
A D A + PL L PYLDE G I A VKASVYA+YDE + ++YIGVSR + QSLRLHLAR P +T+ F+V +I++P+R LLEI +D+W+++ G P+GND G Q WE+ L+V P E D A + + K R EE +K V RRFE + +L RGV E L FDPKLKGKGLLDL + K PDS+VP
Sbjct: 82 ANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVP 279
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A7S2WPP4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPP4_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.950e-44 Identity = 89/203 (43.84%), Postives = 127/203 (62.56%), Query Frame = 1
Query: 484 QMQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVET-AGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLLMPKPDSSV 1089
Q+ + Q + A++ L +D PYL ++G I+ + +G +ASVYAIYD + L+++G+SR + QSLRLHL R P +F+K ++ PSR LLE ++++WI ENG P GND ++WE P +V TEED+ + ++ GRE+ IK VARRFE V +L+ RGV E L FDPKLKGKGLLDL+ K +
Sbjct: 84 QLHARAHQRGSVELASLPSLDSIDSRPYLTDEGKISSADPPSGTRASVYAIYDTHEHLRFVGISRDISQSLRLHLGRQPELCYFYKAMHMQSPSRMLLESVRENWIAENGVCPDGNDGEGALSTWEKPTDVNGLMTEEDRNAIDEARQIGREDGAIKKVARRFETQKVDVLKARGVTENLRFDPKLKGKGLLDLISEKKSAQT 286
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A1Y1IDT5_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDT5_KLENI) HSP 1 Score: 169 bits (429), Expect = 3.920e-44 Identity = 99/206 (48.06%), Postives = 124/206 (60.19%), Query Frame = 1
Query: 496 QTRQAAAR----GDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDLL--MPKPDSSVPK 1095
+ RQAAAR G A VTPLA+L L P+L E+G I A KASVYAI+DE KV++++G+SR + SLRLH AR P + KVQ+I P RS LE I+D+WI E G P GND G Q WENPL+V P T+++KA V +K VARR E + R E L FDPKLK KG+LD+ P PD+ VP+
Sbjct: 102 ERRQAAARRAGRGAAPVTPLAELPLVPFLTEEGKIADCSQADAKASVYAIFDEEKVVRHVGISRAIGPSLRLHFARVPLQCWAVKVQHIKAPRRSALEAIRDAWIAELGYRPTGNDNGPEQNRWENPLDVRPLMTDDEKAAVEEAAPGPPTAKALKQVARRVEAELKASYAARQSTESLRFDPKLKEKGMLDVKNPAPPPDTKVPE 307
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Match: A0A2K1K7G9_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7G9_PHYPA) HSP 1 Score: 165 bits (418), Expect = 2.860e-43 Identity = 92/203 (45.32%), Postives = 129/203 (63.55%), Query Frame = 1
Query: 490 QEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYDEVKVLQYIGVSRGLQQSLRLHLARSPSETHFFKVQNIARPSRSLLEIIKDSWIEENGSVPKGNDEGEFQASWENPLNVIPKFTEEDKALVAAKKEKGREEAGIKAVARRFEGNIVKILEERGVKEKLLFDPKLKGKGLLDL--LMPKPDSSVP 1092
Q+ R+ + +G V+ L+ L+ PYL E+G I G KAS+YAI+DE K L +IG+SR + QS+RLH AR P + ++ KV ++++PSR+LLE +D+WI ENGSVP GND GE Q WEN L+ P T+E+K L + +K VARR E ++ I ++R + L FDPKLK + LLDL + KPD+SVP
Sbjct: 48 QDALRRQSMQGGEGVS-LSSLEYIPYLTEEGHIADCTEPGAKASLYAIFDENKTLCFIGISRQVYQSMRLHFARRPLQCYYVKVMHVSKPSRALLEGTRDAWISENGSVPVGNDNGEIQNLWENALDCTPFMTDEEKLLHEEAAPGPPKAKVLKNVARRIEKDLEGIFKQRNCTDVLRFDPKLKDRCLLDLKGVAVKPDTSVP 249 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11393.899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11393.899.1 >prot_S-dermatodea_contig11393.899.1 ID=prot_S-dermatodea_contig11393.899.1|Name=mRNA_S-dermatodea_contig11393.899.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=204bp MQEQTRQAAARGDAAVTPLADLDLTPYLDEKGMITKVETAGVKASVYAIYback to top mRNA from alignment at S-dermatodea_contig11393:2642..6471+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11393.899.1 ID=mRNA_S-dermatodea_contig11393.899.1|Name=mRNA_S-dermatodea_contig11393.899.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3830bp|location=Sequence derived from alignment at S-dermatodea_contig11393:2642..6471+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11393:2642..6471+ >mRNA_S-dermatodea_contig11393.899.1 ID=mRNA_S-dermatodea_contig11393.899.1|Name=mRNA_S-dermatodea_contig11393.899.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1224bp|location=Sequence derived from alignment at S-dermatodea_contig11393:2642..6471+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |