mRNA_S-dermatodea_contig11388.895.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: D7FTE2_ECTSI (L-type lectin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE2_ECTSI) HSP 1 Score: 308 bits (790), Expect = 1.810e-101 Identity = 149/204 (73.04%), Postives = 176/204 (86.27%), Query Frame = 1
Query: 4 GRFFGFQETFTGMAIVINTNRNLLSSGK-PGEPMGRHRDVSVVANNGTRDYDELVAGLEGCTANVRFDERRDDFNVLQSTRIRMKVSGNTVALEVDARNSGRWRRCATLSHVDMPADWAAKCSVGVIAQTSDKTNNHDLLGFRLYTEAQDAWEVDTYAD-EDELDSLVHHMEHELFNVHDSLQETIETLREAEEEAERRLAELE 609
GRFFG E FTG+ +V NTNR LL+ K PGEPMGRHRDVSV+ANNGTR+Y L+ LEGCTANVRFDE RDDFNV+QSTR+R+KV GNTVA+EVDARN+GRWRRC+T++H+DMPADWA+K +VG+IA+TS+KTNNHDLL R+YT DAWEVDTY D EDE+DSL+HHMEHELFNVHDSL+ETI+TL +AE +AE RL LE
Sbjct: 137 GRFFGIDEKFTGLVVVANTNRQLLNRDKLPGEPMGRHRDVSVIANNGTRNYGNLIDSLEGCTANVRFDETRDDFNVMQSTRVRLKVEGNTVAMEVDARNAGRWRRCSTIAHLDMPADWASKSNVGIIAKTSEKTNNHDLLSLRVYTNPNDAWEVDTYEDDEDEMDSLMHHMEHELFNVHDSLRETIDTLAQAERDAETRLLLLE 340
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: A0A835YN92_9STRA (Concanavalin A-like lectin/glucanase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN92_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.200e-51 Identity = 96/207 (46.38%), Postives = 133/207 (64.25%), Query Frame = 1
Query: 4 GRFFGFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDELVAGLEGCTANVRFDERRDDFNVLQSTRIRMKVSGNTVALEVDARNSGRWRRCATLSHVDMPADWAAKCSVGVIAQTSDKTNNHDLLGFRLYTEAQDAWEVDTYADEDE-----LDSLVHHMEHELFNVHDSLQETIETLREAEEEAERRLAELE 609
G FG FTG+ IV++T RN E RHRDVSVV ++G R +++ + L GC ANVR+ E RDDFNVL++TRIR V+ N L++DARN+GRWRRC T++ VD+P WA + + G++A ++NN+D+L RLY A AW ++ Y EDE LVHH+EHE+F VH+SL+ ++ L +AE AE R+ LE
Sbjct: 170 GDVFGMDAAFTGIGIVVDTKRN--------EGDNRHRDVSVVMSDGRRTREQIQSNLVGCNANVRYWEGRDDFNVLRATRIR--VNENLFTLDIDARNTGRWRRCVTMNTVDLPRGWAERATAGLLAGNQAESNNNDVLSLRLYKSADSAWVLEKYEGEDEDADGEWGILVHHIEHEMFTVHNSLKSAVQLLEKAETSAEHRITALE 366
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: A0A835YWL8_9STRA (Legume-like lectin family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWL8_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.990e-39 Identity = 93/205 (45.37%), Postives = 132/205 (64.39%), Query Frame = 1
Query: 22 QETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDELVAGLEGCTANVRFDERRDDFNVLQSTRIRMKVSGNTVALEVDA--RNSGRWRRCAT--LSHVDMPAD-WAAKCSVGVIAQTSDKTNNHDLLGFRLYTEAQDAWEVD-TYADEDELDS---LVHHMEHELFNVHDSLQETIETLREAEEEAERRLAELE 609
+ FTG+ +V++TN N K G H DVS+V N+G+R + V LEGC A +RF E RDDFNVL+++R+R+K + T LEVD RN+GRWRRCAT L+ +PA W VG++A T+ ++NHD+L R+Y A + D T E+E D LVHHMEHEL++VH +LQ+T++ L + E E+E+R+A+LE
Sbjct: 108 KADFTGVMVVVDTNPN----DKAG---ANHFDVSIVYNDGSRA--DAVQNLEGCIAPLRFHEGRDDFNVLKASRLRIKYTAATRMLEVDMDPRNTGRWRRCATANLAKRGLPAGGWPRTAHVGLVAATTGSSDNHDVLSLRVYDTLDQAAQTDETEGHEEEDDDYMVLVHHMEHELYDVHAALQKTLDQLFQQEAESEQRIAQLE 303
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: A0A835ZHK2_9STRA (L-type lectin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHK2_9STRA) HSP 1 Score: 113 bits (283), Expect = 6.700e-29 Identity = 53/122 (43.44%), Postives = 80/122 (65.57%), Query Frame = 1
Query: 16 GFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDELVAGLEGCTANVRFDERRDDFNVLQSTRIRMKVSG-NTVALEVDARNSGRWRRCATLSHVDMPADWAAKCSVGV 378
G E F G+ ++++T R + +HRD+S+V NNG + +++ L+GC AN+R+ E RDDF VL+S+R+R++ S NT+ LEVD+RNSGRWRRCA + D+P WA + VG+
Sbjct: 1 GCAEKFMGVGVIVDTYRRAEDA--------KHRDISMVTNNGRKGGAQVMTELQGCNANLRYWEGRDDFTVLKSSRLRLRFSSDNTLILEVDSRNSGRWRRCARIDKADLPRSWAYRSYVGL 114
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: A0A7S2B8C4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B8C4_9STRA) HSP 1 Score: 108 bits (269), Expect = 4.160e-24 Identity = 72/230 (31.30%), Postives = 118/230 (51.30%), Query Frame = 1
Query: 4 GRFFGFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDELVAGLEGCTANVRFDERRDDFNVLQSTRIRMKVSGNTVALEVDARNSGRWRRCATLSHVDMP--ADWAAKCSVGVIAQTSDKTNNHDLLGFRLYTE-----------------------AQDAWE--VDTYADE-DELDSLVHHMEHELFNVHDSLQETIETLREAEEEAERRLAELE 609
G G E FTG ++ +T +N E + RHRDVSV+ N+G + ++ LEGC A++R+ E R DF+V +R ++ V+G + +++D +N G+++ CA VD+P DWA +GV A T +NHD++ +++ +Q+ +E DT + D+L+ L HH EHEL V D ++ + L+ E +E R+ ELE
Sbjct: 137 GDLHGSVERFTGFGVIFDTFKNT-------ESLSRHRDVSVIVNDGESSTELMMDKLEGCDASIRYHEDRADFSVESMSRAKVIVTGKRLVVQIDGKNDGQFKDCAV---VDLPFAMDWAKSAHIGVTASTGQLADNHDVISLTTFSDLVKHEQSEALVLSTPSFVKGDGISQERFERIEDTMSKILDKLEYLEHHTEHELMAVEDHIKVSTSKLQAQEAISEGRIDELE 356
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: A0A8K1CDM0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CDM0_PYTOL) HSP 1 Score: 101 bits (252), Expect = 7.730e-22 Identity = 55/156 (35.26%), Postives = 87/156 (55.77%), Query Frame = 1
Query: 16 GFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDELVAGLE-GCTANVRFDERRDDFNVLQS-TRIRMKVSGNTVALEVDARNSGRWRRCATLSHVDMPADWAAKCSVGVIAQTSDKTNNHDLLGFRLYTEAQDAWEVDTYAD 477
GF + FTG+ +VI+T N E G H+DVS+ N+G++D + + GC A VR+ E+ F+ + S +R+R+K+ G V +EVD ++GRW CA ++ V ADW ++G+ T +NHD++ F ++E QD T AD
Sbjct: 123 GFTDRFTGVGVVIDTFNN-------PEHRGGHKDVSIQVNDGSKDINMINDQTRVGCDAAVRYHEQSAAFDPVHSMSRVRVKIDGRKVVVEVDPSSNGRWESCAEVT-VPFAADWLRSSTIGITGATGSLADNHDIIRFEAFSEFQDGAASATDAD 270
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: A0A421GXX3_9STRA (L-type lectin-like domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GXX3_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.910e-21 Identity = 51/148 (34.46%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 16 GFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDEL-VAGLEGCTANVRFDERRDDFNVLQS-TRIRMKVSGNTVALEVDARNSGRWRRCATLSHVDMPADWAAKCSVGVIAQTSDKTNNHDLLGFRLYTEAQDA 453
GF + + G+ +VI+T N E G H+DVS+ N+GT+ YD++ EGC A VR+ E+ +F+ + S +R+++K+S N +A+EVD +SG W C ++ + DW + ++G+ A T +NHD++ F YT+ D+
Sbjct: 115 GFTDKYKGVGVVIDTFNN-------PEHKGGHKDVSIFVNDGTKTYDQMHEEKREGCNAAVRYHEQSANFDPVHSISRVKVKISKNRLAVEVDEHSSGLWVACHEMT-LPFSEDWLRESTIGITASTGALADNHDIIRFDAYTDFTDS 254
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: A0A3F2RHB2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHB2_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.070e-21 Identity = 51/148 (34.46%), Postives = 87/148 (58.78%), Query Frame = 1
Query: 16 GFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDEL-VAGLEGCTANVRFDERRDDFNVLQS-TRIRMKVSGNTVALEVDARNSGRWRRCATLSHVDMPADWAAKCSVGVIAQTSDKTNNHDLLGFRLYTEAQDA 453
GF + + G+ +VI+T N E G H+DVS+ N+GT+ YD++ EGC A VR+ E+ +F+ + S +R+++K+S N +A+EVD +SG W C ++ + DW + ++G+ A T +NHD++ F YT+ D+
Sbjct: 125 GFTDKYKGVGVVIDTFNN-------PEHKGGHKDVSIFVNDGTKTYDQMHEEKREGCNAAVRYHEQSANFDPVHSISRVKVKISKNRLAVEVDEHSSGLWVACHEMT-LPFSEDWLRESTIGITASTGALADNHDIIRFDAYTDFTDS 264
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: W4FDZ6_9STRA (L-type lectin-like domain-containing protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FDZ6_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.600e-20 Identity = 53/147 (36.05%), Postives = 83/147 (56.46%), Query Frame = 1
Query: 16 GFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDELVAGLE-GCTANVRFDERRDDFN-VLQSTRIRMKVSGNTVALEVDARNSGRWRRCATLSHVDMPADWAAKCSVGVIAQTSDKTNNHDLLGFRLYTEAQD 450
GF++ + G+ IVI+T N E G H+DV++ N+GT+ D L + GC A +RF E F+ V S+R+R+ V G + LEVDA+++ W+ C + +P+DW +VG+ T +NHD+LGF ++EA D
Sbjct: 120 GFKDQYVGVGIVIDTFVN-------SEHKGGHKDVTIQINDGTKTTDTLQDETKIGCDAALRFHEESAHFDPVFSSSRLRIVVDGVKLKLEVDAKSTSEWKPCYE-GDLPLPSDWLQDVTVGITGSTGGLADNHDVLGFLSFSEADD 258
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Match: A0A6A4ZPW1_9STRA (L-type lectin-like domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZPW1_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.030e-20 Identity = 53/147 (36.05%), Postives = 83/147 (56.46%), Query Frame = 1
Query: 16 GFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDYDELVAGLE-GCTANVRFDERRDDFN-VLQSTRIRMKVSGNTVALEVDARNSGRWRRCATLSHVDMPADWAAKCSVGVIAQTSDKTNNHDLLGFRLYTEAQD 450
GF++ + G+ IVI+T N E G H+DV++ N+GT+ D L + GC A +RF E F+ V S+R+R+ V G + LEVDA+++ W+ C + +P+DW +VG+ T +NHD+LGF ++EA D
Sbjct: 120 GFKDQYVGVGIVIDTFVN-------SEHKGGHKDVTIQINDGTKTTDTLQDETKIGCDAALRFHEESAHFDPVFSSSRLRIVVDGVKLKLEVDAKSTSEWKPCYE-GDLPLPSDWLQDVTVGITGSTGGLADNHDVLGFLSFSEADD 258 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11388.895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11388.895.1 >prot_S-dermatodea_contig11388.895.1 ID=prot_S-dermatodea_contig11388.895.1|Name=mRNA_S-dermatodea_contig11388.895.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=203bp GGRFFGFQETFTGMAIVINTNRNLLSSGKPGEPMGRHRDVSVVANNGTRDback to top mRNA from alignment at S-dermatodea_contig11388:973..4321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11388.895.1 ID=mRNA_S-dermatodea_contig11388.895.1|Name=mRNA_S-dermatodea_contig11388.895.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3349bp|location=Sequence derived from alignment at S-dermatodea_contig11388:973..4321- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11388:973..4321- >mRNA_S-dermatodea_contig11388.895.1 ID=mRNA_S-dermatodea_contig11388.895.1|Name=mRNA_S-dermatodea_contig11388.895.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at S-dermatodea_contig11388:973..4321- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |