mRNA_S-dermatodea_contig11372.886.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
|
Overview
Homology
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: D7FKV7_ECTSI (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKV7_ECTSI) HSP 1 Score: 895 bits (2313), Expect = 0.000e+0 Identity = 447/506 (88.34%), Postives = 460/506 (90.91%), Query Frame = 1
Query: 1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGDIPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1518
CELFLMWSPQGTYLTTFHVPGIALWGGE+FEKQGRFPHKDVKVVEFSPCETYVMTCNFE GDKAIIVWEVLTGQMLRAFPMATTTAA DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLD KSLKAEGVSDFEWSPKDN++AYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFA+VLGD+PKLEVTFYTMKGGAGKNELQEL+TL++RPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAV+QPVTGSHWKAQMDNGYQLFSFQ GERF+EFKKDNFYQIQWRPRPASLLTSAEKKK+VKNLRKYEK KI+MK+EFRQ VAEM RL GRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct: 216 CELFLMWSPQGTYLTTFHVPGIALWGGERFEKQGRFPHKDVKVVEFSPCETYVMTCNFEQGDKAIIVWEVLTGQMLRAFPMATTTAA----------------DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQELETLQDRPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGSHWKAQMDNGYQLFSFQ----GERFHEFKKDNFYQIQWRPRPASLLTSAEKKKVVKNLRKYEKXXXXXXXXXXXXXXXXXXXXKIQMKLEFRQQVAEMNLRLEGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 701
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A835YNH6_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNH6_9STRA) HSP 1 Score: 655 bits (1691), Expect = 8.070e-229 Identity = 318/504 (63.10%), Postives = 394/504 (78.17%), Query Frame = 1
Query: 4 ELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDN--IIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLG-DIPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVK 1506
EL++ WSPQGTYL + H+PGIALWGGEQFEKQGRF H +VKV+EFSPCE Y++TCNF+ ++A+IVWEV +G +LR FP RA + G SLF+WS DG+++ARKG+D +SIY LPSM LLD KSLKA G++DFEWSP + +AYWAPEQ N PARVSVVEIPSRK+LRQKNL VSECRLHWQ+EG YLCVKVLRHSK+KKTMYNNFE+FRV +P VPVE +E + V AFAWEP GDRFA+V G ++P++ +TFYTMKGGA NEL E+ TL ++P NH+YWSP G ++AAMG++ G NG L FYDVE+++ L+++EHFR +Y+EWDPSGRY CTAV QP+ GSHWKAQMDNGY+L+SFQ GE+F E KDNFYQ+ WRPRP SLL+S EKKK+V+NL+KYE+RFER DK RRKAR AM+ K+R K FR HVA R+RL R ELV+LR+GYDS DE+++ V++RT EV++SVK
Sbjct: 229 ELYVTWSPQGTYLASLHIPGIALWGGEQFEKQGRFAHSNVKVIEFSPCENYLLTCNFDTTERAMIVWEVRSGAVLRTFP-------------ARAFE-----GGPPSLFKWSPDGRFIARKGRDCVSIYALPSMALLDKKSLKATGIADFEWSPSTSSCALAYWAPEQDNTPARVSVVEIPSRKDLRQKNLFNVSECRLHWQNEGTYLCVKVLRHSKTKKTMYNNFELFRVADPQVPVEMLELRSNVIAFAWEPTGDRFAIVHGTELPRVNITFYTMKGGASGNELAEVVTLEDKPVNHLYWSPQGQFIVMAAMGENTGGTNGYLNFYDVESKTILRESEHFRLSYLEWDPSGRYICTAVNQPIDGSHWKAQMDNGYRLWSFQ----GEQFYELTKDNFYQVLWRPRPVSLLSSEEKKKVVRNLKKYERRFERADKIASRRKARAAMAGKVRQKQAFRAHVAARRERLLARHHELVELRDGYDSHDEANFFVETRTREVIMSVK 710
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A6H5KAX0_9PHAE (eIF2A domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAX0_9PHAE) HSP 1 Score: 624 bits (1610), Expect = 9.330e-222 Identity = 321/409 (78.48%), Postives = 342/409 (83.62%), Query Frame = 1
Query: 310 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGDIPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQH------VAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1518
DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLD KSLKAEGVSDFEWSPKDN++AYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW QVAAFAWEPAGDRFA+VLGD+PKLEVTFYTMKGGAGKNELQ L+TL++RPFNHIYWSP+GNIC+LAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAV+QPVTG HWKAQMDNGYQLFSFQ GERF+EFKKD+FYQIQWRPRPASLLTSAEKKK+VKNLRKY+KRFE+DD+ AREAM+DKI+MK+EFRQ VA+M+ RL RRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ
Sbjct: 14 DGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDKKSLKAEGVSDFEWSPKDNVLAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHW--------------------------------------------QVAAFAWEPAGDRFALVLGDVPKLEVTFYTMKGGAGKNELQVLETLQDRPFNHIYWSPVGNICILAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVSQPVTGGHWKAQMDNGYQLFSFQ----GERFHEFKKDHFYQIQWRPRPASLLTSAEKKKVVKNLRKYDKRFEKDDRXXXXXXAREAMADKIQMKLEFRQQASGLSRVADMKLRLEARRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 374
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: G5A2B4_PHYSP (Eukaryotic translation initiation factor 3 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=G5A2B4_PHYSP) HSP 1 Score: 519 bits (1336), Expect = 2.190e-175 Identity = 265/507 (52.27%), Postives = 350/507 (69.03%), Query Frame = 1
Query: 1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKGGAGK-NELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
C +++WSPQGTYL TFH GIALWGG+++EK GRF HK+VK+ FSP E Y++T + D AII+W+V T +MLRAFP T A V V G + F+WSAD KY+AR+GKD+ISIYELPSM+LL+ KSL+AEGV DF WSP D I+AYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTMY NFE+FRV E LVPVE +E K+ + AFAWEP G RFA G+ +L V+FY M GG+ E+ L TL+++ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQ G++ E KKD FYQ WRPRP +LL+ E +VKNL+K+EKRF++ D+ K+R + +++ R + EF++ + + A RR E V L +GYDS+DES Y+V S T + VL KE +
Sbjct: 206 CSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVKLAVFSPNENYILTLSETEQDSAIIIWDVKTSKMLRAFPAGKPTGAKGEV-----------VQGLMTPFKWSADDKYVARRGKDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMYTNFELFRVHEQLVPVEMLEVKESIVAFAWEPKGTRFATAHGEGQQRLNVSFYDMDGGSKSVKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ----GKQLLEEKKDAFYQFLWRPRPRTLLSDEEYNNVVKNLKKFEKRFDQMDRLKERERLAAEKAERNRQEQEFQELLEKRLASAAARRAEYVALLDGYDSEDESEYIVQSHTYDDVLETKEEV 693
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A8K1FRG0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FRG0_PYTOL) HSP 1 Score: 518 bits (1335), Expect = 3.000e-175 Identity = 265/507 (52.27%), Postives = 350/507 (69.03%), Query Frame = 1
Query: 1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKGGAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVIQ 1518
C +++WSPQGTYL TFH GIALWGG+ +EK GRF HK+VK+ FSP E Y++T + + AII+W+V T +MLRAFP T A V V G + F+WSAD +++AR+GKD+IS+YELPSM+LLD KSLKA+GV DF WSP D I+AYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+L W G +L VKV RHSKSKKT++ NFEIFRV E LVPVE+ E K + AF++EP G RFA+V G+ +L V+FY M GGA KNEL L TL ++P +H+YWSP GN +LA +G+ NG LEF+D + + ++ EHF+C ++EWDPSGR +AV QP+ S++K QMDNG+ L++FQ G++ E KKD FYQ WRPRP +LL+ E K +VKNL+KYEKRF D+ K+R + ++K R EF VA + RRQE + L NGYDS+D+ Y+V++R+ + VLS KE +Q
Sbjct: 206 CSQYVLWSPQGTYLATFHPQGIALWGGDNYEKVGRFAHKNVKIAVFSPQENYLVTLSETDTENAIIIWDVKTSKMLRAFPAGKPTGAKGEV-----------VQGLMTPFKWSADDRFVARRGKDVISVYELPSMKLLDKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLQWHPNGTFLNVKVTRHSKSKKTLFTNFEIFRVHESLVPVESFEMKDTIVAFSFEPKGSRFAIVHGEGNQRLNVSFYDMNGGAKKNELTLLYTLTDKPCSHLYWSPHGNNIVLAGLGEI----NGVLEFWDTDEKQSITIQEHFKCTHVEWDPSGRVVSSAVCQPIDNSYYKFQMDNGFTLWTFQ----GKKLLEEKKDAFYQFLWRPRPRTLLSDKEYKDVVKNLKKYEKRFNEMDRMKERERIAAEKAEKQRQHQEFVDLVAARAETARARRQEYIALLNGYDSEDDDEYIVETRSYDDVLSEKEEVQ 693
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: M4BHP4_HYAAE (Eukaryotic translation initiation factor 3 subunit B n=15 Tax=Peronosporaceae TaxID=4777 RepID=M4BHP4_HYAAE) HSP 1 Score: 514 bits (1323), Expect = 4.790e-173 Identity = 261/507 (51.48%), Postives = 352/507 (69.43%), Query Frame = 1
Query: 1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGDIPK-LEVTFYTMKGGAG-KNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
C +++WSPQGTYL TFH GIALWGG+++EK GRF HK VK+ FSP E Y++T + + AII+W+V T ++LRAFP T A V V G + F+WSAD KY+AR+G D+IS+YELPSM+LL+ KSL+AEGV DF WSP D I+AYWAPE N PARVS+VE+PSR E+RQKNL VS+C+LHW +G +LCVKV RHSKSKKTMY NFE+FRV+E LVPVE +E K + AFAWEP G RFA V G+ + L V+FY M GG+ E+ L TL+++ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C+++EWDPSGR TAV QP+ S++K MDNGY L++FQ G++ E KKD F+Q WRPRP +LL+ A+ K +VKNL+K+EKRF++ D+ K+R + +++ + + EF++ + + AGRR E + L GYDSDDE+ Y+V T + VL VKE +
Sbjct: 206 CMQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKKVKLAMFSPNENYLITVSETEQESAIIIWDVKTSKLLRAFPAGKPTGAKGEV-----------VQGLMTPFKWSADDKYVARRGTDVISVYELPSMKLLEKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRHEVRQKNLFNVSDCKLHWHPDGTFLCVKVTRHSKSKKTMYTNFELFRVQEQLVPVEMLEVKDNIVAFAWEPKGTRFAAVHGEGQQHLNVSFYDMDGGSNVAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDTTEQQSITVQEHFKCSHVEWDPSGRVVATAVCQPLDNSYYKLTMDNGYNLWTFQ----GKKLLEEKKDTFFQFLWRPRPRTLLSDAQYKNVVKNLKKFEKRFDQMDRFKERERLAAENAERNKKEQEFQELLQKRLITAAGRRAEYLSLLGGYDSDDENEYIVQKHTYDDVLEVKEEV 693
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A5D6XPM0_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM0_9STRA) HSP 1 Score: 510 bits (1314), Expect = 5.330e-172 Identity = 259/511 (50.68%), Postives = 344/511 (67.32%), Query Frame = 1
Query: 1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGDIP-KLEVTFYTMKGGAG-----KNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
C +++WSP GTYL TFH PG+ALW GE++EK GRF HK+VK+ FSP ETY++T + + AIIVW+V +G++LR FP T V V G + F+WSAD +++AR+GKD++S+YELPSM+LL+ KSLKA+GV DF WSP D I+AYWAPE N PARVS+VE+PSR E+RQKNL VS+C+L+W G +L VKV RHSKSKKT++ NFE+FRVREPLVPVE +E K + AFAWEP G RFA V G+ +L V+FY M GGA E+ L TL E+P +H+YWSP+GN +LA +G+ NG LEF+D + + ++ EHF+C ++EWDPSGR T+V QP+ S++K QMDNGY L+SFQ G+ E KKD FYQ WRPRP SLL+ E +VKNL+KYEKRF D+ K+R + ++K R++ EF+ V + + R V L GYDS+DE Y+V++ +VVLS E +
Sbjct: 207 CSQYVLWSPHGTYLATFHQPGLALWAGEKYEKVGRFAHKNVKIAVFSPNETYLLTVSETDAENAIIVWDVKSGKILRTFPAGKPTGVKGEV-----------VQGLQTPFKWSADDRFVARRGKDVVSVYELPSMKLLEKKSLKADGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRTEIRQKNLFNVSDCKLNWHPNGTFLGVKVTRHSKSKKTLFTNFEMFRVREPLVPVEMLEMKDSIVAFAWEPKGTRFATVHGESQLRLNVSFYDMNGGAAGSKAASTEITLLYTLTEKPCSHLYWSPLGNNIVLAGLGE----MNGSLEFWDTDERQSITAQEHFKCTHVEWDPSGRVVATSVCQPLDNSYYKFQMDNGYNLWSFQ----GKLLKEEKKDAFYQFLWRPRPRSLLSDKEYANVVKNLKKYEKRFNEMDRLKERERLAAIQAEKNRLRQEFQDLVEARVRAVQSARATYVSLLGGYDSEDEDEYIVETHVHDVVLSKAEEV 698
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A0P1APB3_PLAHL (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APB3_PLAHL) HSP 1 Score: 509 bits (1311), Expect = 1.290e-171 Identity = 260/507 (51.28%), Postives = 349/507 (68.84%), Query Frame = 1
Query: 1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKGGA-GKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
C +++WSPQG+YL TFH GIALWGGE++EK GRF HK+VK+ FSP E Y++T + + AII+W+V T +MLRAFP +T V V G + F+WSAD K++AR+GKD+IS+YELPSM+LLD KSL+AEGV DF WSP D I+AYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FRV E LVPVE +E K + AFAWEP G RFA V G+ +L V+FY M GG+ E+ L TL ++ +H+YWSP+GN +LA +G+ NG+LEF+DV Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQ G++ E KK+ FYQ WRPRP +LL+ +E +VKNL+ +EKRF++ D+ K+R + +++ R + EF++ + A RR E + L +GYDS DES Y+V S T + VL +KE +
Sbjct: 206 CSQYVLWSPQGSYLATFHPQGIALWGGEKYEKVGRFAHKNVKLAVFSPHEKYLITLSETEQEAAIIIWDVQTSKMLRAFPAGKSTGVKGEV-----------VQGLMTPFKWSADDKFVARRGKDVISVYELPSMKLLDKKSLRAEGVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRVHEQLVPVEMLEMKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGSKSSKEVTLLYTLTDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDVSEQQSITIQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ----GKQLLEEKKETFYQFLWRPRPRTLLSESEYNHVVKNLKTFEKRFDQMDRLKERERLAALNAERKREEQEFQELLDRRLAIAAARRAEYIALLDGYDSQDESEYIVQSHTYDDVLEIKEEV 693
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A484EF01_BRELC (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF01_BRELC) HSP 1 Score: 507 bits (1306), Expect = 7.100e-171 Identity = 258/507 (50.89%), Postives = 347/507 (68.44%), Query Frame = 1
Query: 1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKGG-AGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
C +++WSPQGTYLTTFH GIALWGGE++EK GRF HK+VK+ FSP E Y++T + + AII+W+V T +MLRAFP T + V V G + F+WSAD KY+AR+GKD+IS+YELPSM+LL+ KSL+AE V DF WSP D I+AYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LC+KV RHSKSKKTMY NFE+FRV EPLVPVE +E K + AFAWEP G RFA V G+ +L V+FY M GG E+ L TL+++ +H+YWSP+GN +LA +G+ NG+LEF+D Q +L +HF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQ G + KK+ FYQ WRPRP SLL+ E +VKNL+K+EKRF++ D+ K+R + +++++ + EF++ + + A RR E + L +GYDS+DE Y+ + T + VL V E +
Sbjct: 205 CSQYVLWSPQGTYLTTFHPQGIALWGGEKYEKVGRFAHKNVKMAVFSPHENYLITVSETEQEAAIIIWDVHTSKMLRAFPAGKATGSKGEV-----------VQGLTTPFKWSADDKYIARRGKDVISVYELPSMKLLEKKSLRAEEVHDFFWSPTDPILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCIKVTRHSKSKKTMYTNFELFRVHEPLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLNVSFYDMDGGNKSAKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSLTVQDHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYILWTFQ----GMQLLAEKKETFYQFLWRPRPRSLLSDEEYNNVVKNLKKFEKRFDQMDRFKERERLAAIKAERMQKEQEFQELLETRQTTTAARRLEYIALLDGYDSEDEREYIFQTHTYDDVLEVNEEV 692
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Match: A0A3M6VP81_9STRA (Eukaryotic translation initiation factor 3 subunit B n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP81_9STRA) HSP 1 Score: 507 bits (1306), Expect = 7.330e-171 Identity = 261/507 (51.48%), Postives = 348/507 (68.64%), Query Frame = 1
Query: 1 CELFLMWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTCNFEPGDKAIIVWEVLTGQMLRAFPMATTTAAVLHVKLTRASDPHRTVDGAASLFRWSADGKYLARKGKDLISIYELPSMRLLDVKSLKAEGVSDFEWSPKDNIIAYWAPEQANAPARVSVVEIPSRKELRQKNLVMVSECRLHWQDEGDYLCVKVLRHSKSKKTMYNNFEIFRVREPLVPVETMEKKQQVAAFAWEPAGDRFAVVLGD-IPKLEVTFYTMKG-GAGKNELQELDTLRERPFNHIYWSPMGNICLLAAMGDDVGPHNGRLEFYDVENQSTLKQTEHFRCNYIEWDPSGRYACTAVAQPVTGSHWKAQMDNGYQLFSFQARNRGERFNEFKKDNFYQIQWRPRPASLLTSAEKKKIVKNLRKYEKRFERDDKEKDRRKAREAMSDKIRMKMEFRQHVAEMRQRLAGRRQELVDLRNGYDSDDESHYVVDSRTGEVVLSVKEVI 1515
C +++WSPQGTYL TFH GIALWGG+++EK GRF HK+V FSP E Y++T + D AII+W+V T +MLRAFP T A + V G + F+WSA KY+AR+G D+ISIYELPSM+LL+ KSL+AEGV DF WSP D I+AYWAPE N PARVS+VE+PSR+E+RQKNL VS+C+LHW G +LCVKV RHSKSKKTM+ NFE+FR++E LVPVE +E K + AFAWEP G RFA V G+ +L V+FY M G E+ L TL+++ +H+YWSP+GN +LA +G+ NG+LEF+D Q ++ EHF+C ++EWDPSGR TAV QP+ S++K MDNGY L++FQ G++ E KK++FYQ WRPRP +LL+ AE KK+VKNL+KYEKRF++ D+ K+R + +++ R EF++ + + A RR E + L +GYDS+DE+ Y+V S T + VL KE I
Sbjct: 206 CSQYVLWSPQGTYLATFHPQGIALWGGDKYEKVGRFAHKNVTRAVFSPHENYLITVSETEQDSAIIIWDVKTSKMLRAFPAGKPTGA-----------KNEVVQGLMTPFKWSAGDKYVARRGNDVISIYELPSMKLLEKKSLRAEGVHDFFWSPTDLILAYWAPEGNNVPARVSLVELPSRREVRQKNLFNVSDCKLHWHPNGTFLCVKVTRHSKSKKTMFTNFELFRLQEQLVPVEMLEIKDNIVAFAWEPKGTRFATVHGEGQQRLSVSFYDMDGENKSTKEVTLLYTLKDKACSHLYWSPLGNNIVLAGLGEI----NGQLEFWDATEQQSITVQEHFKCTHVEWDPSGRVVATAVCQPLDNSYYKFTMDNGYTLWTFQ----GKQLLEEKKESFYQFLWRPRPRTLLSDAEYKKVVKNLKKYEKRFDQMDRLKERERQAAKNAERNRKVQEFQELLQRLLAAAAVRRGEYIALLDGYDSEDENEYIVQSHTYDDVLESKEEI 693 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11372.886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11372.886.1 >prot_S-dermatodea_contig11372.886.1 ID=prot_S-dermatodea_contig11372.886.1|Name=mRNA_S-dermatodea_contig11372.886.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=502bp MWSPQGTYLTTFHVPGIALWGGEQFEKQGRFPHKDVKVVEFSPCETYVMTback to top mRNA from alignment at S-dermatodea_contig11372:3711..7504- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11372.886.1 ID=mRNA_S-dermatodea_contig11372.886.1|Name=mRNA_S-dermatodea_contig11372.886.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=3794bp|location=Sequence derived from alignment at S-dermatodea_contig11372:3711..7504- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11372:3711..7504- >mRNA_S-dermatodea_contig11372.886.1 ID=mRNA_S-dermatodea_contig11372.886.1|Name=mRNA_S-dermatodea_contig11372.886.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=3012bp|location=Sequence derived from alignment at S-dermatodea_contig11372:3711..7504- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |