prot_S-dermatodea_contig10124.88.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig10124.88.1
Unique Nameprot_S-dermatodea_contig10124.88.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length65
Homology
BLAST of mRNA_S-dermatodea_contig10124.88.1 vs. uniprot
Match: A0A835Z4N5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4N5_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.890e-7
Identity = 27/58 (46.55%), Postives = 47/58 (81.03%), Query Frame = 0
Query:    1 MYQSVGKMFMMQTKGEITELLDTKQQDKSKSETQLQSKQSYLQKRLTSEQSNLDEIIK 58
            +Y+SVGK+FM+ +K EI  LLD +  +++KSE QL+ K++YL+ RL S+++NL+E+++
Sbjct:  199 LYRSVGKVFMLNSKKEIDTLLDAQATERAKSEEQLKGKKAYLENRLNSQKTNLNELLR 256          
BLAST of mRNA_S-dermatodea_contig10124.88.1 vs. uniprot
Match: A0A7S2CYH7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CYH7_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.260e-6
Identity = 24/59 (40.68%), Postives = 45/59 (76.27%), Query Frame = 0
Query:    1 MYQSVGKMFMMQTKGEITELLDTKQQDKSKSETQLQSKQSYLQKRLTSEQSNLDEIIKN 59
            MY+SVGKMFM+  K ++  +L  + Q + K++T+L S++ YLQ+R+TS++ N+ ++++N
Sbjct:  189 MYRSVGKMFMLTPKADMEGILQEQGQTEKKTQTELMSRRKYLQRRITSQEENIKDLMQN 247          
BLAST of mRNA_S-dermatodea_contig10124.88.1 vs. uniprot
Match: A0A6V2AJX7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2AJX7_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.760e-6
Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    1 MYQSVGKMFMMQTKGEITELLDTKQQDKSKSETQLQSKQSYLQKRLTSEQSNLDEIIKN 59
            MY+ +GKMFM+ T+G+I   LDT  +++SK E  L++K  YL++++ S+Q N+ E+ K+
Sbjct:  207 MYRGIGKMFMLSTRGDIMNHLDTCVEEESKREESLKNKAEYLERKMKSQQLNIQELTKS 265          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10124.88.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z4N5_9STRA1.890e-746.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CYH7_9STRA3.260e-640.68Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2AJX7_9STRA4.760e-642.37Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009053PrefoldinGENE3D1.10.287.370coord: 1..62
e-value: 4.0E-5
score: 25.3
IPR002777Prefoldin beta-likePFAMPF01920Prefoldin_2coord: 1..58
e-value: 1.5E-7
score: 31.4
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig10124contigS-dermatodea_contig10124:789..5255 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig10124.88.1mRNA_S-dermatodea_contig10124.88.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig10124 177..5284 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig10124.88.1 ID=prot_S-dermatodea_contig10124.88.1|Name=mRNA_S-dermatodea_contig10124.88.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=65bp
MYQSVGKMFMMQTKGEITELLDTKQQDKSKSETQLQSKQSYLQKRLTSEQ
SNLDEIIKNIQAQG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009053Prefoldin
IPR002777PFD_beta-like