mRNA_S-dermatodea_contig11073.702.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: D7FUC2_ECTSI (Similar to sideroflexin 5 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUC2_ECTSI) HSP 1 Score: 539 bits (1388), Expect = 6.610e-188 Identity = 271/347 (78.10%), Postives = 302/347 (87.03%), Query Frame = 1
Query: 1 MGAELSSVRKEIDDAREVPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQGEVPKGTTDSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNMVMVTATIAPAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRAAARGGG--GPAATIIRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
MGAE SS + DA+EVPPFR EGPRYDMS VGR LHFY +NDPRTLL + ED +AE+L++ GE P+GTTD+DLWHAR+VLES+LHPDTGE IFPLFRFSAFVPVNMV+VTAT+ PAV+ SFPATA +HF+NQTYNAAINYANRNASNPVP ARL EGYAGAV+TSLSIG+ +TALTKR AAR GG GPAA IIR TLPFLA A AGASNV LMRRNELTTGVDVFDD+G+DLGKSVEAGKMGL KCAAAR+IWNVPVMMFPP++MSRLERL+ VSS+PR RMACETAVVT+CLL AVSPALAFFPQRDSL VDTLE KF GL D AG+P+TR+WYNKGL
Sbjct: 1 MGAEFSSA---VTDAQEVPPFRREGPRYDMSTFVGRMLHFYSVNDPRTLLFTDEDTKSAEKLLKLADIGEAPEGTTDADLWHARRVLESALHPDTGEPIFPLFRFSAFVPVNMVIVTATVTPAVISSFPATAFIHFLNQTYNAAINYANRNASNPVPRARLVEGYAGAVITSLSIGMLSTALTKRVAARAGGAGGPAAAIIRSTLPFLAVAGAGASNVLLMRRNELTTGVDVFDDEGKDLGKSVEAGKMGLMKCAAARVIWNVPVMMFPPMIMSRLERLRLVSSSPRLRMACETAVVTSCLLAAVSPALAFFPQRDSLEVDTLEPKFSGLSDSAGKPVTRVWYNKGL 344
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: A0A836CEG4_9STRA (Tricarboxylate carrier-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG4_9STRA) HSP 1 Score: 417 bits (1073), Expect = 9.500e-137 Identity = 213/345 (61.74%), Postives = 263/345 (76.23%), Query Frame = 1
Query: 1 MGAELSSVRKEIDDAREVPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQGEVPKGTTDSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNMVMVTATIAPAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRAAARGGGGPAATIIRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
MGA+LS K++ A PPF +E PRYD+ VGRSLHFY +NDPRTLL S +D+ A+ L+ +K G +P G D LW AR+++ES++HPDT + I P RFSAFVP+NM +VTAT+APAV+ SF AT C+H +NQTYNAAINYANRNASNPV + RL EGYAGAV TSL+IGLSATALT+RA+ AA +IR TLPFLATA AG +NV LMRRNEL GVD+FD +G GKS AG+ G+ KCAAAR+IWNVP+MMFPP+LM+ LER + NPR +MA E V+T+CLLGAVSP+LA FPQRD+L +TLE +F+GL D AGRP+T ++YNKGL
Sbjct: 244 MGADLS---KQLKAAEATPPFSLEKPRYDLDSFVGRSLHFYSVNDPRTLLCSSDDLKASMALLESYKAGTLPAGIGDQQLWAARRLIESAIHPDTKQPIPPYLRFSAFVPINMFIVTATLAPAVIGSFAATGCIHLVNQTYNAAINYANRNASNPVSTQRLMEGYAGAVATSLTIGLSATALTRRASRWTP--LAAGLIRSTLPFLATAGAGFANVALMRRNELVEGVDMFDAEGNMRGKSKIAGQTGIAKCAAARLIWNVPIMMFPPLLMTHLERTGPLRRNPRLKMAVEVGVITSCLLGAVSPSLAVFPQRDALRAETLEPEFRGLTDSAGRPVTTLYYNKGL 583
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: F2UI50_SALR5 (Sideroflexin 5 n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI50_SALR5) HSP 1 Score: 277 bits (709), Expect = 1.510e-85 Identity = 144/336 (42.86%), Postives = 206/336 (61.31%), Query Frame = 1
Query: 40 DAREVPPFRMEGP-RYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQGEVPKGTTDSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNMVMVTATIAPAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRAAARGGGGPAATII---RCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
D +PPF + P R+D+S +GR HFY DP TLL SK ++ A+ L+ FK G V T++ LW AR++ +S+LHPDTGE IFPLFRFSAF P N+ + + P F TA FINQTYN +NYANRNAS+ + ++ L Y AV +S + L +++ AAR GG P+ ++ R +P+LA AG N+ +R+ E + GV V+ + G DLGKSV AG+ L KC+ R +W +P+ PP++MS ++++K + NPR R E V+ + V PALA +PQRDSL V +E +F L+D +G+PI R+++NKGL
Sbjct: 4 DKESMPPFSLAAPSRFDLSTYLGRVKHFYNTTDPSTLLYSKSKIMEAKALMESFKHGTVDPSVTNTQLWKARKLCDSALHPDTGELIFPLFRFSAFAPANIPIAAMLLYPTANPYFIITA--QFINQTYNVCVNYANRNASSNMSTSTLLTAYGAAVTSSCGLALGFGKISRMLAARAGGSPSPLMVAAQRAVVPYLAVVGAGIVNLLCIRQTEFSEGVTVYSEGGEDLGKSVVAGRDALKKCSIVRALWCIPICC-PPLIMSLVDKVKVIRQNPRLRFIAELVVIGASVGFGVPPALAAYPQRDSLPVTAIESRFHNLIDESGKPIDRVYFNKGL 336
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: A0A0D2UFK2_CAPO3 (Sidoreflexin n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UFK2_CAPO3) HSP 1 Score: 239 bits (610), Expect = 7.120e-71 Identity = 137/340 (40.29%), Postives = 195/340 (57.35%), Query Frame = 1
Query: 49 EVPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQGEVPKG----TTDSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNMVMVTATIA--PAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRA-----AARGGGGPAATIIRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
EVP F ++ PRYD S GR HF+ + DP LL S + + L+ FK G++ G TD+ +W AR++ E+ LHPDT E I +FR SAFVP N+ ++ + P VL T +INQT+NA NY+NRNA+ P +A +A Y A S+ + L KRA A RG ++R +PF+A A AG +N++LMRR E TG+DV D +G +G+S EAGK+ L + A R++ VP+++ PP++MS L R F+ SNPR RMA E V+ + GA+ A+A FPQ + LE +F + G PIT ++YNKG+
Sbjct: 5 EVPKFTLDKPRYDQSAFSGRVRHFFDLVDPMLLLTSDAKLKESVDLLAAFKAGKINPGQPGQVTDAQMWEARRIKEAILHPDTNEPIPAVFRMSAFVPANVPIIAGMLMSPPTVLN----TVMWQWINQTFNAGFNYSNRNANAPQSTAEIATAYGAASAISVGTAVGLGELVKRATNLPPAVRG-------VVRTVVPFVAVASAGVANMYLMRRGEAETGIDVRDSEGNLVGRSQEAGKICLKQVAVTRVLLPVPILILPPVIMSGLNRTAFLKSNPRVRMAVEVGVIAGAIWGALPLAIATFPQVMPVETSKLETRFHQMRTPKGDPITTLYYNKGV 333
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: A0A0L0G865_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G865_9EUKA) HSP 1 Score: 231 bits (588), Expect = 4.380e-69 Identity = 119/226 (52.65%), Postives = 161/226 (71.24%), Query Frame = 1
Query: 358 IAPAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRAAARGGGGPAATIIRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
++P V+ S T H+ NQ+YNAA+NY NRNAS PVP++ LA+GY GAV S+SIGL+ATALT +AA G G AA IR TLPFLA A++G N+ LMRR+EL TGV VFD +G G+S++A + GL +CAAAR++WN+P+ +FP ++MSRLE+ F+ SNPR RMA E V+ CL V PALA FPQ +S+ D +E++F+ L D G+ + + +NKGL
Sbjct: 2 LSPVVIASPVLTIAAHWTNQSYNAAVNYCNRNASQPVPASLLAQGYVGAVGASVSIGLAATALTTKAAKLGPG--AALAIRATLPFLACAVSGVLNIGLMRRSELETGVTVFDHEGEARGQSIKAAEKGLKECAAARVLWNIPITVFPALIMSRLEKKTFLVSNPRVRMAVEMGVIGVCLFLGVVPALAAFPQIESMNADDMEEQFQNLKDSNGQKVEKFVFNKGL 225
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: A0A3P3YBD5_PLABS (Sidoreflexin n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YBD5_PLABS) HSP 1 Score: 234 bits (597), Expect = 5.780e-69 Identity = 126/329 (38.30%), Postives = 191/329 (58.05%), Query Frame = 1
Query: 52 VPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQ-GEVPKGTTDSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNMVMVTATIAPAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRAAARGGGGPAATIIRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
+P F +E PRYD S +GR F I +PRTL S ++ A L+ QF+ G P G ++ +W AR LE+ +HPDTG+ I LFRFSAFVPVN+ + + + T ++NQ+YN A+N+ANRNASNP+ + ++ + YA A I + + + A R +++ PF+A A AG NV LMR NEL G+++ D++GR +GKS +AG+ LT+ A R+ P+++ PPI+++ L + K + ++ R R+ E +VT CL AV A+ FPQ ++ +E +F+GL D GRP+T +NKGL
Sbjct: 15 IPAFSLERPRYDQSTYMGRVRKFIDIINPRTLFTSDAELAHAAGLIAQFRDLGGAPPGVSNEQMWAARSTLEAIVHPDTGKPIPLLFRFSAFVPVNLPICVGMLTT---NTVVGTVFWQWVNQSYNVAVNHANRNASNPMSNEQIMKAYAAAXXXXXXISVGLNQIAQVANLR--------LLKQFTPFVAVASAGVLNVTLMRYNELQEGIEIKDEEGRIVGKSKQAGRAALTQVALTRVALPAPILVLPPIIINLLNKAKMMPASKRARLVVEVGIVTACLAAAVPLAIGLFPQTGAIRAQDVEPEFQGLKDSKGRPVTSFSFNKGL 332
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: A0A024UIH5_9STRA (Sidoreflexin n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UIH5_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.270e-66 Identity = 131/344 (38.08%), Postives = 195/344 (56.69%), Query Frame = 1
Query: 10 ELSSVRKEIDDAREVPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQGEVPKGTT-DSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNMVMVTATI-APAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRAAARGGGGPAATIIRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
+L+ R + PPF ++ PRYD S GR HF + P + L S +++ ++ L+ K G+V G D+DLW AR+++E+ HP TGE + LFR AFVPVN+ + + I AP L + T +INQ+YNA NYANRNAS + +A+ YA AV S + + + A+ +++ T+PF+A A AGA N MR NELT G+D+ DD+G G+S EAGK LT+ A R+ +P+++FPP ++ ++ K + N R+ E +VVT C+ GA A+A FPQ S+ +E +F+GL + G+PIT YNKG+
Sbjct: 24 QLTIGRSRMTTDATTPPFSLDKPRYDQSTYFGRWKHFSELVSPSSFLLSDDEITKSKDLIDNVKSGKVAPGQVPDADLWKARRIVETVFHPQTGEKLPALFRMPAFVPVNIPICSGMILAPPTLFN---TVFWQWINQSYNAGFNYANRNASGVDDTTAIAKAYASAVAISCATSVGLGKAVEHASFLAP--TVRSVLSKTVPFVAVAAAGAGNAVFMRLNELTDGIDILDDEGVPRGRSQEAGKQSLTQVALTRVALPMPILLFPPFILEVMKTAKALPKNRFGRVFTEISVVTLCIWGAFPAAIALFPQYGSIPATQVEPQFRGLKNSKGQPITEFTYNKGI 362
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: K1RJ31_CRAGI (Sidoreflexin n=3 Tax=Crassostrea TaxID=6564 RepID=K1RJ31_CRAGI) HSP 1 Score: 226 bits (575), Expect = 7.820e-66 Identity = 130/330 (39.39%), Postives = 188/330 (56.97%), Query Frame = 1
Query: 49 EVPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQGEVPKGTTDSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNMVMVTATIAPAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRAAARGGGGPAATI-IRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
E PPFR+ RYD S GR HF+ + DPRTL S+E + + +L+ F +G +P T+ DLW A+++ ++ +HPDTGE IF FR S FVP MV + P ++ +T +INQ++NA +NYANRNA++P P +R GY GAV T++SI + L ++A PA + I+ +PF A A A N+ LMR +EL+TG++V D +G +GKS A K L + A R+ P+++ PPI+MS LE+ F PR + AVVT C A+ A+A FPQ + +LE + + L T + YNKGL
Sbjct: 4 EYPPFRLGKSRYDQSTFDGRLRHFFDVIDPRTLFTSEEKLKSCVKLLDDFSKGHLPPTVTNKDLWEAQKIKQAIIHPDTGEKIFMPFRMSGFVPFGSPMVVGLLLPN--QTIASTIFWQWINQSHNACVNYANRNATSPTPMSRFLLGYTGAVSTAVSIAVGLNLLIQKA---NKFSPATKVLIQRFVPFPAVACASTCNLLLMRNSELSTGIEVEDHNGNVIGKSKVAAKKALMETAITRMFLPAPILVIPPIIMSLLEKTAFFKRYPRVHLPVHAAVVTVCFGLALPVAIAIFPQYSKVDTASLEPEIQKLTK-----DTTLIYNKGL 323
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: A0A8K1C4W5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4W5_PYTOL) HSP 1 Score: 224 bits (572), Expect = 2.660e-65 Identity = 125/331 (37.76%), Postives = 190/331 (57.40%), Query Frame = 1
Query: 49 EVPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQGEVPKGT-TDSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNM-VMVTATIAPAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSLSIGLSATALTKRAAARGGGGPAATIIRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
+VPPF ++ PRYD S GR F + P LL ++ED+ + + ++QG + +G +D +LW AR++ ES +HP TGE I +FR SAFVPVN+ + +AP L + T ++NQ+YNA NYANRNAS+ ++ + + YA A S + + + + A + G +A +R T+PF+A A AGA N MR NE G+D+ D++G G+SV AG+ L + A R+ +P+++ PP ++ L + + + R+ E VVT CL GA+ A+A FPQ+ S+ D +ED FK L DR G+ I YNKG+
Sbjct: 5 DVPPFSIDEPRYDQSTYYGRWRQFVELVSPSALLLTQEDINGVRKTLEDYRQGHIKRGDKSDEELWEARRLYESVVHPQTGEVIPAIFRLSAFVPVNIPICAGMLLAPPTLFN---TVFWQWVNQSYNAGFNYANRNASSEQDTSDIFKSYATASFVSCATAVGLGKIVETAKSLSPGMRSA--LRKTVPFIAVASAGAFNAVSMRFNEFVEGIDILDEEGEVRGRSVAAGRQSLGQVALTRVALPMPILLLPPYIIEGLNKARLMPKTKYPRLITEITVVTLCLWGALPAAVALFPQKGSISADKVEDAFKNLTDRQGKRIEHFTYNKGI 330
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Match: A0A5D6XWH8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWH8_9STRA) HSP 1 Score: 224 bits (570), Expect = 3.080e-65 Identity = 129/335 (38.51%), Postives = 185/335 (55.22%), Query Frame = 1
Query: 43 AREVPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLDSKEDMLAAERLVRQFKQGEVPKG-TTDSDLWHARQVLESSLHPDTGETIFPLFRFSAFVPVNMVMVTATI-APAVLRSFPATACVHFINQTYNAAINYANRNASNPVPSARLAEGYAGAVLTSL--SIGLSATALTKRAAARGGGGPAATIIRCTLPFLATALAGASNVFLMRRNELTTGVDVFDDDGRDLGKSVEAGKMGLTKCAAARIIWNVPVMMFPPILMSRLERLKFVSSNPRFRMACETAVVTTCLLGAVSPALAFFPQRDSLLVDTLEDKFKGLVDRAGRPITRIWYNKGL 1035
A +VPPF ++ P+YD S GR F + P LL + E++ A + F+ G + +G +D +LW AR+V ES++HP TGE + FR SAFVPVN+ + I AP L + T +INQ+YNA NYANRNAS+ ++ + + Y A + S ++GL R T+PF+A A AGA N MR NE T G+DV DDDG+ G+SV AG+ LT+ A R+ +P+++ PP L L + K + R+A E V+T CL GA+ A+A FPQ S+ D +E+ + L D+ G +TR YNKG+
Sbjct: 2 ATDVPPFTIDAPKYDQSTYFGRWRQFVELVSPSALLLTTEEIQRATDTLANFRSGAITRGDVSDEELWRARRVYESAVHPQTGEVVPIYFRLSAFVPVNIPICAGMILAPPTLVN---TVLWQWINQSYNAGFNYANRNASSEQDTSTILKSYVTASVVSCVTAVGLG---------------------RATVPFIAVASAGAFNAVSMRFNEFTEGIDVMDDDGKVRGRSVAAGRQSLTQVALTRVALPMPILLLPPYLYEGLNKAKLMPKAKYPRLATELVVLTLCLWGALPAAVALFPQNGSIAADDVEEHLRNLTDKRGERVTRFTYNKGI 312 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig11073.702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig11073.702.1 >prot_S-dermatodea_contig11073.702.1 ID=prot_S-dermatodea_contig11073.702.1|Name=mRNA_S-dermatodea_contig11073.702.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=346bp MGAELSSVRKEIDDAREVPPFRMEGPRYDMSIMVGRSLHFYCINDPRTLLback to top mRNA from alignment at S-dermatodea_contig11073:2202..7273+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig11073.702.1 ID=mRNA_S-dermatodea_contig11073.702.1|Name=mRNA_S-dermatodea_contig11073.702.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=5072bp|location=Sequence derived from alignment at S-dermatodea_contig11073:2202..7273+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig11073:2202..7273+ >mRNA_S-dermatodea_contig11073.702.1 ID=mRNA_S-dermatodea_contig11073.702.1|Name=mRNA_S-dermatodea_contig11073.702.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=2076bp|location=Sequence derived from alignment at S-dermatodea_contig11073:2202..7273+ (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |