mRNA_S-dermatodea_contig10902.605.1 (mRNA) Saccorhiza dermatodea SderLu1190fm monoicous
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Overview
Homology
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A6H5KNT1_9PHAE (Carrier domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KNT1_9PHAE) HSP 1 Score: 419 bits (1077), Expect = 2.510e-136 Identity = 204/239 (85.36%), Postives = 218/239 (91.21%), Query Frame = 1
Query: 1 QMSDIKSMFSGGASWPELNWVVTDSLPLPPSDAQTNGGFQKPDPADVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQPQLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLETERKVGAV 717
+M+DIK MFSGGASWPELNWVVTDSL + + G F PDP DVAF+QYTSGSTSEPKGVMITH+NLA NL LI+ GLSAVDDTVVV WLPQYHDMGLIGSVLALLF GGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKF+AL+ QP+LDLSCVRHMINAAEPVDTASIDRFY+VFEAHGLKRGVIFPTYGLAEHTVYVCSNG+DRLVVDR++LETERKV V
Sbjct: 130 KMADIKGMFSGGASWPELNWVVTDSLASVTAADEDTGRFSVPDPTDVAFIQYTSGSTSEPKGVMITHSNLAHNLKLILAGLSAVDDTVVVAWLPQYHDMGLIGSVLALLFSGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFLALDPQPKLDLSCVRHMINAAEPVDTASIDRFYSVFEAHGLKRGVIFPTYGLAEHTVYVCSNGKDRLVVDRVMLETERKVRPV 368
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A7S2SRR8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRR8_9STRA) HSP 1 Score: 279 bits (714), Expect = 3.600e-92 Identity = 137/186 (73.66%), Postives = 151/186 (81.18%), Query Frame = 1
Query: 151 QYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQPQLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLETERKV 708
QYTSGSTSEPKGV+I+H NLA NL +IV+ L A T+VV WLP YHDMGLIGS L LFCGGSGFY+SP+SFI+ P LWVELISRHRGTHMQAPNFAY L ARK++A P LDLSCV+HMINAAEPV I+RFYAVFEA GL R V FPTYGLAEHTV+VCSNGR L VD+ LLE ERKV
Sbjct: 1 QYTSGSTSEPKGVVISHRNLAHNLKIIVHNLQASTSTIVVSWLPLYHDMGLIGSYLGCLFCGGSGFYLSPLSFIRNPVLWVELISRHRGTHMQAPNFAYALVARKYLARRPAPTLDLSCVQHMINAAEPVHELDIERFYAVFEASGLPRRV-FPTYGLAEHTVFVCSNGRQVLTVDKSLLERERKV 185
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A7S2HQ97_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQ97_9STRA) HSP 1 Score: 296 bits (757), Expect = 8.210e-92 Identity = 142/240 (59.17%), Postives = 182/240 (75.83%), Query Frame = 1
Query: 1 QMSDIKSMFS---GGASWPELNWVVTDSLPLPPSDAQTNGGFQKPDPA--DVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQPQLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLETERK 705
++S ++S FS G +WP++ W+VTDS+ A+ GF+ P+ AFLQ+TSGSTSEPKGV+++H NLA NL L+V G+ A + TV V WLP YHDMGLIGS L LL+ GG+G YMSPVSF++ P LW+E +S++RGTH APNFAYGLTARKF+A QP LDLSCV HMINAAEP+ ++RFYAVFE GLKRGVIFPTYGLAEHT++VCSNG+ L V++ +LE+E++
Sbjct: 140 KLSGVQSFFSKDSGNGTWPDIKWIVTDSVI---QAAKGGDGFESCSPSLDTPAFLQFTSGSTSEPKGVIVSHGNLAHNLDLMVTGVGASETTVQVSWLPLYHDMGLIGSYLGLLYSGGTGVYMSPVSFVRNPPLWMETMSKYRGTHASAPNFAYGLTARKFLAKRPQPLLDLSCVEHMINAAEPIHWIDVERFYAVFEQAGLKRGVIFPTYGLAEHTLFVCSNGKQVLTVNKTILESEQR 376
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A7S2HQA0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HQA0_9STRA) HSP 1 Score: 296 bits (757), Expect = 5.730e-90 Identity = 142/240 (59.17%), Postives = 182/240 (75.83%), Query Frame = 1
Query: 1 QMSDIKSMFS---GGASWPELNWVVTDSLPLPPSDAQTNGGFQKPDPA--DVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQPQLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLETERK 705
++S ++S FS G +WP++ W+VTDS+ A+ GF+ P+ AFLQ+TSGSTSEPKGV+++H NLA NL L+V G+ A + TV V WLP YHDMGLIGS L LL+ GG+G YMSPVSF++ P LW+E +S++RGTH APNFAYGLTARKF+A QP LDLSCV HMINAAEP+ ++RFYAVFE GLKRGVIFPTYGLAEHT++VCSNG+ L V++ +LE+E++
Sbjct: 140 KLSGVQSFFSKDSGNGTWPDIKWIVTDSVI---QAAKGGDGFESCSPSLDTPAFLQFTSGSTSEPKGVIVSHGNLAHNLDLMVTGVGASETTVQVSWLPLYHDMGLIGSYLGLLYSGGTGVYMSPVSFVRNPPLWMETMSKYRGTHASAPNFAYGLTARKFLAKRPQPLLDLSCVEHMINAAEPIHWIDVERFYAVFEQAGLKRGVIFPTYGLAEHTLFVCSNGKQVLTVNKTILESEQR 376
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A835Z6I3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I3_9STRA) HSP 1 Score: 283 bits (723), Expect = 6.510e-89 Identity = 143/236 (60.59%), Postives = 166/236 (70.34%), Query Frame = 1
Query: 34 GASWPELNWVVTDSLPLPPSDAQTNGGFQKPDPADVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQP---------QLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLETERKVGA 714
G S PE+ WVVTDSLP SD P P D+AFLQYTSGSTS PKGVM+THANLA NL I + A +DTV + WLPQYHDMGLIG+ L L+CGG GFY+SP +FI+RPALW +L+SRHR TH QAP+FA+GL ARK+ +L QQ +LDLS ++H+INAAEPVD S+DRF AVF HGL GVI PTYGLAEHTV VC+NG RLV R LE R A
Sbjct: 10 GLSLPEVRWVVTDSLPAI-SDVGATAALGAPKPEDLAFLQYTSGSTSAPKGVMLTHANLAHNLAFITRAIGADEDTVELSWLPQYHDMGLIGAYLGCLYCGGRGFYLSPAAFIRRPALWPQLLSRHRVTHTQAPSFAFGLAARKYASLAQQQGDVPAAPRERLDLSRLKHVINAAEPVDPVSMDRFIAVFTPHGLPAGVIRPTYGLAEHTVCVCTNGARRLVAHRAALEGARSTAA 244
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A7S2SQC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQC3_9STRA) HSP 1 Score: 289 bits (739), Expect = 8.430e-89 Identity = 145/238 (60.92%), Postives = 171/238 (71.85%), Query Frame = 1
Query: 1 QMSDIKSMFSGGASWPELNWVVTDSLPL---PPSDAQTNGGFQKPDPADVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQPQ----LDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLE 693
+M+DI++MFS A WPEL WVV D LP PP + P P +VAFLQYTSGSTSEPKGVMI+ NL NL+ IV+ L A D TVVV WLPQYHDMGLIGS L LFCGGSG+Y+SP SF+K P LW++ +SR+RGTH+QAPNFAY LT R++ L + LDLS VRHMINAAEPV + FY F HGL RGV++PTYGLAEHTV+VCS GR L VD++LLE
Sbjct: 165 KMADIRNMFSSEAKWPELCWVVVDDLPSYRSPPHVPVSETSGSAP-PEEVAFLQYTSGSTSEPKGVMISQGNLWHNLSSIVHELEADDSTVVVSWLPQYHDMGLIGSYLGCLFCGGSGYYLSPFSFLKNPLLWLQSVSRYRGTHLQAPNFAYALTVRRYRPLTDAARGTLNLDLSSVRHMINAAEPVSAGDLAAFYECFSPHGLPRGVVYPTYGLAEHTVFVCSGGRTVLQVDKVLLE 401
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: B7GDP1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GDP1_PHATC) HSP 1 Score: 281 bits (719), Expect = 8.060e-87 Identity = 143/250 (57.20%), Postives = 176/250 (70.40%), Query Frame = 1
Query: 1 QMSDIKSMFSG----GASWPE-LNWVVTDSL---------PLPPSDAQTNGGFQKPDPADVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQPQLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLETERKV 708
+M+ I+ +F+ + WP+ L+W TD+L P PPSD + VAFLQYTSGSTSEPKGVMITH NLA NLT+I N A DDTVVV WLPQYHDMGLIGS L +LFCGG+G+Y+SP+SF++RP +W+E +SR+R TH+QAPNFA+ LTARKF +LDLS VRH+INAAEPVD SID FY +F +G VI+PTYGLAEHTV+VCS G+ RL VD+ LE + KV
Sbjct: 136 KMAGIRDVFTKFQRPTSGWPDDLDWTTTDTLKEPRNSVNLPQPPSDR-----------SQVAFLQYTSGSTSEPKGVMITHGNLAHNLTIITNDSQAKDDTVVVSWLPQYHDMGLIGSYLGVLFCGGTGYYLSPLSFLQRPMVWIEAVSRYRATHLQAPNFAFKLTARKFSIDASNTELDLSSVRHVINAAEPVDEESIDNFYRIFGKYGFAN-VIYPTYGLAEHTVFVCSGGKQRLTVDKAKLEIDAKV 373
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A7R9U2M5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2M5_9STRA) HSP 1 Score: 281 bits (719), Expect = 1.200e-86 Identity = 143/224 (63.84%), Postives = 167/224 (74.55%), Query Frame = 1
Query: 43 WPE-LNWVVTDSLPLPPSDAQTNGGFQK-PDPADVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMAL--EQQPQLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLETER 702
WP+ L WV+TD+ A +G + D DVAFLQ+TSGSTSEPKGV IT NLA NL I L AV DTVVV WLPQYHDMGLIG+ L +LFCGG G+YMSP++FIKRP LW+ELIS++RGTHMQAPNF Y L ARKF AL +Q+P LDLSCVRHMINAAEPV +I+ FY F ++GL R V+FPTYGLAEHTV+VCS G+ RLVV + LE R
Sbjct: 144 WPDSLRWVITDTGGRKTKKAVVDGNLSEGADSNDVAFLQFTSGSTSEPKGVQITFGNLAHNLKAITTDLQAVQDTVVVSWLPQYHDMGLIGAYLGILFCGGHGYYMSPLTFIKRPVLWMELISKYRGTHMQAPNFTYILCARKFKALPEKQRPSLDLSCVRHMINAAEPVTAGAIEGFYDTFASYGLGR-VVFPTYGLAEHTVFVCSGGQKRLVVSKRALENGR 366
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A7S3L309_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L309_9STRA) HSP 1 Score: 276 bits (707), Expect = 1.870e-85 Identity = 145/247 (58.70%), Postives = 176/247 (71.26%), Query Frame = 1
Query: 1 QMSDIKSMFS-----GGASWPE-LNWVVTDSLPLPPSDAQTNGGFQ--KPDPADVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQPQLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRDRLVVDRMLLETERKVGAV 717
+M+ I +F G A+WP+ L WVVTD+ S T FQ PDP+D+AFLQYTSGSTS+PKGVMITHANL NL++I N L A +DT+VV WLPQYHDMGLIGS L L+CGG G+YMSP+SFI+RP LW+E IS+++ TH+QAPNFA+ LTARKF E + LDLS VRH+INAAEPVD SI+ FY F GL + VI+PTYGLAE TV+VCS G RL V + LE +V V
Sbjct: 70 KMAGITQVFGKLKNKGAAAWPDNLKWVVTDTT----SKVSTADSFQIVNPDPSDIAFLQYTSGSTSDPKGVMITHANLGHNLSIITNELKATNDTIVVSWLPQYHDMGLIGSYLGALYCGGQGYYMSPLSFIQRPMLWIEAISKYKATHLQAPNFAFKLTARKFDKGEYR-DLDLSSVRHIINAAEPVDEDSIESFYTAFCPFGLNK-VIYPTYGLAESTVFVCSGGTQRLTVVKTELEVNGRVEIV 310
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Match: A0A067BNK6_SAPPC (AMP-binding domain-containing protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BNK6_SAPPC) HSP 1 Score: 263 bits (673), Expect = 4.600e-83 Identity = 136/233 (58.37%), Postives = 162/233 (69.53%), Query Frame = 1
Query: 16 KSMFSGGASWPELNWVVTDSLPLPPSDAQTNGGFQKPDPADVAFLQYTSGSTSEPKGVMITHANLADNLTLIVNGLSAVDDTVVVGWLPQYHDMGLIGSVLALLFCGGSGFYMSPVSFIKRPALWVELISRHRGTHMQAPNFAYGLTARKFMALEQQPQLDLSCVRHMINAAEPVDTASIDRFYAVFEAHGLKRGVIFPTYGLAEHTVYVCSNGRD--RLVVDRMLLETERKV 708
K FS WP+L+WV TD L P+ + P +AFLQYTSGSTS+PKGVMI+H NL NL LIV+ L+A D VVV WLPQYHDMGLIG+ L +LF GG+G Y+SP SFIK P+LW+ LI++H+ TH+QAPNFAY L ARKF + P LDLS VRHMIN AEPVD +ID FYA F GL RGVI PTYGLAEHTVYVC + L V + +LE+E K+
Sbjct: 140 KMTFSERYPWPDLDWVETDRLIHAPAPSSMT--LAAPSADAIAFLQYTSGSTSDPKGVMISHGNLTSNLHLIVDALAARQDAVVVSWLPQYHDMGLIGAYLGILFSGGNGVYLSPFSFIKNPSLWIALIAKHKATHLQAPNFAYALCARKFQS--PSPTLDLSSVRHMINGAEPVDVHAIDAFYATFSPLGLPRGVIRPTYGLAEHTVYVCDSPPTLTHLRVVKSVLESEDKM 368 The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig10902.605.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-dermatodea_contig10902.605.1 >prot_S-dermatodea_contig10902.605.1 ID=prot_S-dermatodea_contig10902.605.1|Name=mRNA_S-dermatodea_contig10902.605.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=238bp MSDIKSMFSGGASWPELNWVVTDSLPLPPSDAQTNGGFQKPDPADVAFLQback to top mRNA from alignment at S-dermatodea_contig10902:1038..5238- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-dermatodea_contig10902.605.1 ID=mRNA_S-dermatodea_contig10902.605.1|Name=mRNA_S-dermatodea_contig10902.605.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=mRNA|length=4201bp|location=Sequence derived from alignment at S-dermatodea_contig10902:1038..5238- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top Coding sequence (CDS) from alignment at S-dermatodea_contig10902:1038..5238- >mRNA_S-dermatodea_contig10902.605.1 ID=mRNA_S-dermatodea_contig10902.605.1|Name=mRNA_S-dermatodea_contig10902.605.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=CDS|length=1428bp|location=Sequence derived from alignment at S-dermatodea_contig10902:1038..5238- (Saccorhiza dermatodea SderLu1190fm monoicous)back to top |