prot_S-dermatodea_contig995.17876.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig995.17876.1
Unique Nameprot_S-dermatodea_contig995.17876.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length313
Homology
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BLAST of mRNA_S-dermatodea_contig995.17876.1 vs. uniprot
Match: D7FNH4_ECTSI (N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH4_ECTSI)

HSP 1 Score: 321 bits (822), Expect = 4.110e-102
Identity = 164/262 (62.60%), Postives = 192/262 (73.28%), Query Frame = 0 
Query:   52 AGASTDPGVPSRFKRVLDKATGRHYYYDKETRKTFWKLTEGPGGVPLNVSHEDPRKRRKTYGHPPTDVEAIGYNQGALVWWKVDGREQGKDG---TGG--KAVGHGLAGGGGXXKMYGMGGTDGGEGEDDGSDPAT-IGYVVHRYRLDGREWHQKGSTSVDGVKVVSTRVNGLQNGLVYRFTVASKTVKGDSAESKPSVAVRPNEPLPEGWKENFNAITGKSVYKNLKAGHTSAERPDINPYFVETELFLRFTPEEAEALSK 307
            AG   +   PSRFKRVLDKATG+HYYYDKET++TFW L + P  +  N+  EDPRKRRKTYG PPT VEA+  NQGA+VWWK+    + ++G   TGG  KA      GG G     G        G+++   P   IG+VV+RYRLDGREWH+KG+TSVD  K VST V  L NGLVYRFTVAS+TV+GDSAES+PSVAVRPNEPLPEGWKE FNA TGKSVY N+K G TS+ERP+ NPYFVET+LFLRFTPEE E LS+
Sbjct:   39 AGGEGEEAAPSRFKRVLDKATGKHYYYDKETKETFWTLADAPNSISPNLPPEDPRKRRKTYGLPPTHVEAVAQNQGAVVWWKLPSSPEEREGPQHTGGNTKATTTNTKGGNGRGGSGGRAVESSVAGDEEKRSPLVPIGFVVYRYRLDGREWHKKGATSVDDAKAVSTAVKALSNGLVYRFTVASRTVEGDSAESEPSVAVRPNEPLPEGWKEKFNATTGKSVYTNVKTGQTSSERPECNPYFVETDLFLRFTPEETETLSE 300
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BLAST of mRNA_S-dermatodea_contig995.17876.1 vs. uniprot
Match: A0A7S3JUG7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUG7_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 8.630e-11
Identity = 59/228 (25.88%), Postives = 87/228 (38.16%), Query Frame = 0 
Query:  107 KRRKTYGHPPTDVEAIGYNQGALVWWKVDGREQGKDGTGGKAVGHGLAGGGGXXKMYGMGGTDGGEGEDDGSDPATIGYVVHRYR-LDGREWHQKGSTSVD---------------GVKVVSTR-----------VNGLQNGLVYRFTVASKTVKGDSAESKPSVAVRPNEPLPEGWKENFNAITGKSVYKNLKAGHTSAERPDINPYFVETELFLRFTPEEAEALSK 307
            + +K +  PP ++ AIG  + A V W +  RE G                                       P  +GY V R R +D   W  KGS  +D               G K+   +           V+ L +   YRF V +   +G S  SK S  +R + PLP  W E       +S Y N K   +S +RP+ +PYF+ T LF++F+  E   L +
Sbjct:  157 RAKKGFPEPPPEIIAIGLAEAAKVSWTIP-RENG---------------------------------------PPILGYTVERQRCIDNENWRDKGSIYIDSQAQIIADTEAAKAIGKKLAKRKNKITPPPTAVLVDQLADDAKYRFRVYAHNARGKSVASKWSNEIRVSRPLPPAWIEVIPKDGSRSYYYNAKTFESSWQRPESDPYFLPTNLFMQFSAMEISHLKE 344
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig995.17876.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNH4_ECTSI4.110e-10262.60N/a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A7S3JUG7_9STRA8.630e-1125.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 251..284
e-value: 1.4
score: 15.3
coord: 59..92
e-value: 3.6
score: 11.6
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 250..284
score: 9.458
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 172..263
e-value: 3.3E-8
score: 35.5
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 52..88
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 175..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig995contigS-dermatodea_contig995:13443..16375 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig995.17876.1mRNA_S-dermatodea_contig995.17876.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig995 13443..16375 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig995.17876.1 ID=prot_S-dermatodea_contig995.17876.1|Name=mRNA_S-dermatodea_contig995.17876.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=313bp
SPTGEVVDLPVSPSPIPDQLVSPLSASRGPSRKGSPASLDASHCADRPAH
AAGASTDPGVPSRFKRVLDKATGRHYYYDKETRKTFWKLTEGPGGVPLNV
SHEDPRKRRKTYGHPPTDVEAIGYNQGALVWWKVDGREQGKDGTGGKAVG
HGLAGGGGGGKMYGMGGTDGGEGEDDGSDPATIGYVVHRYRLDGREWHQK
GSTSVDGVKVVSTRVNGLQNGLVYRFTVASKTVKGDSAESKPSVAVRPNE
PLPEGWKENFNAITGKSVYKNLKAGHTSAERPDINPYFVETELFLRFTPE
EAEALSKARHRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR013783Ig-like_fold
IPR036020WW_dom_sf
IPR036116FN3_sf