prot_S-dermatodea_contig9810.17787.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9810.17787.1
Unique Nameprot_S-dermatodea_contig9810.17787.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length192
Homology
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: A0A6H5KDQ7_9PHAE (U-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDQ7_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.890e-31
Identity = 55/62 (88.71%), Postives = 56/62 (90.32%), Query Frame = 0
Query:  126 QHLCPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSLVSDKTS 187
            QHLCPITRCPME+PAVAADGYTYER AIERW SEHDTSPVTGK LETKVVFKNWSLVS   S
Sbjct:   42 QHLCPITRCPMEDPAVAADGYTYERTAIERWLSEHDTSPVTGKALETKVVFKNWSLVSSSPS 103          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: D7G3T4_ECTSI (Protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3T4_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.120e-21
Identity = 44/52 (84.62%), Postives = 45/52 (86.54%), Query Frame = 0
Query:  136 MENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSLVSDKTS 187
            ME+PAVAADGYTYER AIE W SEHDTSPVTGK LETKVVFKNWSLVS   S
Sbjct:    1 MEDPAVAADGYTYERTAIECWLSEHDTSPVTGKALETKVVFKNWSLVSSSPS 52          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: A0A7R9UF69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF69_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.750e-15
Identity = 35/53 (66.04%), Postives = 44/53 (83.02%), Query Frame = 0
Query:  129 CPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSL 181
            CPIT  PM +P VAADG+TYER AI RWFSEHDTSP+TG++L TK +F N+++
Sbjct:   79 CPITGAPMCDPVVAADGHTYERTAILRWFSEHDTSPLTGEVLVTKALFPNFAI 131          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: K3WL38_GLOUD (U-box domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL38_GLOUD)

HSP 1 Score: 73.2 bits (178), Expect = 1.050e-13
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:  126 QHLCPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSL 181
            Q +CPIT CPM +P VAADG+TY+REAI  WFS  D SP+TG  + T  VF N++L
Sbjct:   16 QLICPITGCPMVDPVVAADGHTYDREAILHWFSNSDISPLTGMHMPTTQVFPNFTL 71          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: A0A7S1BVM2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVM2_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.260e-12
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0
Query:  129 CPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSLVSDKTSKK 189
            CPIT+ PM NP VAADG+TYER+AI RW    D SP+TG+++  + +  N+ L+S  T+ K
Sbjct:   73 CPITKTPMGNPVVAADGHTYERKAIARWLCSSDRSPLTGEMMAHRTLVPNYMLISSLTASK 133          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: A0A5D6XPB9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPB9_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 3.900e-12
Identity = 34/56 (60.71%), Postives = 41/56 (73.21%), Query Frame = 0
Query:  126 QHLCPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSL 181
            Q +CPIT CPM +P VAADG+TYEREAI  WFS  D SP+TG  + T  VF N++L
Sbjct:  483 QLICPITGCPMADPVVAADGHTYEREAILHWFSTSDISPLTGTHIPTTQVFPNFTL 538          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: A0A8K1FDR7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDR7_PYTOL)

HSP 1 Score: 73.6 bits (179), Expect = 6.930e-12
Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 0
Query:  119 SPRAESPQHL-CPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSL 181
            SP A+ P+ L CPIT CPM +P VAADG++YEREAI +WF+  + SP+TG  + T  VF N++L
Sbjct:  425 SPLADCPEQLICPITGCPMMDPVVAADGHSYEREAIVQWFAASNISPMTGTKVPTTQVFPNFTL 488          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: A0A7S3DHX2_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DHX2_9EUKA)

HSP 1 Score: 72.4 bits (176), Expect = 1.130e-11
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0
Query:  128 LCPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSLVS 183
            LCPIT+   ++P VAADG+TYER A+ERWF  H+ SP+TG  L TKV + N++L S
Sbjct:  230 LCPITQEIFKDPVVAADGHTYERSALERWFKNHNLSPLTGTELNTKVTYNNYTLRS 285          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: A0A7J6LA49_PEROL (U-box domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LA49_PEROL)

HSP 1 Score: 69.3 bits (168), Expect = 1.790e-11
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 0
Query:  128 LCPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVV 175
            +CPITR PM +PAVA DG+TYER AIERW + +D SP+TG  + T++V
Sbjct:  102 MCPITRAPMRSPAVACDGHTYERGAIERWLAGNDKSPITGSRMMTRLV 149          
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Match: W2RHR2_PHYPN (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2RHR2_PHYPN)

HSP 1 Score: 72.0 bits (175), Expect = 2.490e-11
Identity = 32/56 (57.14%), Postives = 42/56 (75.00%), Query Frame = 0
Query:  126 QHLCPITRCPMENPAVAADGYTYEREAIERWFSEHDTSPVTGKLLETKVVFKNWSL 181
            Q +CPIT CPM +P VAADG++YEREAI +WF+  D SP+TG  + T  VF N++L
Sbjct:  484 QLICPITGCPMVDPVVAADGHSYEREAIMQWFTTSDISPMTGMHMPTTQVFPNFTL 539          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9810.17787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDQ7_9PHAE1.890e-3188.71U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G3T4_ECTSI1.120e-2184.62Protein kinase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A7R9UF69_9STRA2.750e-1566.04Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
K3WL38_GLOUD1.050e-1358.93U-box domain-containing protein n=1 Tax=Globispora... [more]
A0A7S1BVM2_9STRA1.260e-1250.82Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A5D6XPB9_9STRA3.900e-1260.71Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8K1FDR7_PYTOL6.930e-1254.69Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S3DHX2_9EUKA1.130e-1157.14Hypothetical protein n=2 Tax=Palpitomonas bilix Ta... [more]
A0A7J6LA49_PEROL1.790e-1160.42U-box domain-containing protein n=1 Tax=Perkinsus ... [more]
W2RHR2_PHYPN2.490e-1157.14Uncharacterized protein n=14 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 126..179
e-value: 1.9E-11
score: 54.0
IPR003613U box domainPFAMPF04564U-boxcoord: 127..181
e-value: 1.4E-8
score: 34.8
IPR003613U box domainPROSITEPS51698U_BOXcoord: 122..191
score: 15.915
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 118..181
e-value: 2.0E-20
score: 73.9
NoneNo IPR availablePANTHERPTHR46573FAMILY NOT NAMEDcoord: 124..181
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 125..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9810contigS-dermatodea_contig9810:4524..7558 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9810.17787.1mRNA_S-dermatodea_contig9810.17787.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9810 3114..8176 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9810.17787.1 ID=prot_S-dermatodea_contig9810.17787.1|Name=mRNA_S-dermatodea_contig9810.17787.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=192bp
MGRPASEEKCEVAVTGDKSEKEQTGSLETTGGVIVQGDPSEKDQLPLKDP
GSSEFEGGDGSRGSDGVSSGSLKSADFVTPTGFPMGEAGHVPGGEAGQQA
AMFGSGSEPTTPIAVLATSPRAESPQHLCPITRCPMENPAVAADGYTYER
EAIERWFSEHDTSPVTGKLLETKVVFKNWSLVSDKTSKKSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD