prot_S-dermatodea_contig9801.17778.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9801.17778.1
Unique Nameprot_S-dermatodea_contig9801.17778.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length360
Homology
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BLAST of mRNA_S-dermatodea_contig9801.17778.1 vs. uniprot
Match: A0A6H5LBA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBA6_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.650e-8
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 0 
Query:    1 MALQVRNECSFPGCGTRPSFGMDGDKRPTACSVHRADGMVSVKYIKSRC 49
            + L+  +EC   GC TRPS+GM+GDKRPTAC  H A GMV VK+ +SRC
Sbjct:  524 LVLEDYDECCVSGCATRPSYGMEGDKRPTACVDHAAIGMVIVKHSRSRC 572
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9801.17778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBA6_9PHAE1.650e-859.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9801contigS-dermatodea_contig9801:168..1247 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9801.17778.1mRNA_S-dermatodea_contig9801.17778.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9801 162..1247 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9801.17778.1 ID=prot_S-dermatodea_contig9801.17778.1|Name=mRNA_S-dermatodea_contig9801.17778.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=360bp
MALQVRNECSFPGCGTRPSFGMDGDKRPTACSVHRADGMVSVKYIKSRCC
DFEGCSTYPSYNAKGKRRARRCSKHRLEGMVDVKAPCCEEPGCPTLPYYG
TDGEKRRRRCAVHKLPGMVDVKSRRCEFEGCLTQPTYGVEGDLKARRCAK
HKDGGMINIVHRHCEYNGCTVQPYYGMEGTRSGSHCAKHKLPGMVKTKGQ
RCSHPGCSTRPSYGYDGDKKPDVCGKHKLPGMVDVINRRCDENGCVTQPT
HAMDGTSLATRCAVHQVPGMVNIKSRRCTVLGCHVQPYYGMPGDKKGSRC
SKHKLEGMVDVHNRRCVHEGCLVSASFGRKEDGRGATYCAKHKQQGMSPL
YRRKIPIKTL
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