prot_S-dermatodea_contig979.17767.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig979.17767.1
Unique Nameprot_S-dermatodea_contig979.17767.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length149
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig979.17767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 104..130
e-value: 140.0
score: 3.8
coord: 56..80
e-value: 17.0
score: 11.5
coord: 13..36
e-value: 0.55
score: 19.3
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 59..78
e-value: 0.74
score: 10.6
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 106..127
score: 5.379
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 82..104
score: 5.679
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 15..36
score: 7.55
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 58..81
score: 5.825
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 2..147
e-value: 3.3E-37
score: 129.9
NoneNo IPR availablePANTHERPTHR46662FAMILY NOT NAMEDcoord: 45..145
NoneNo IPR availablePANTHERPTHR46662:SF8coord: 45..145
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 3..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig979contigS-dermatodea_contig979:15875..17108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig979.17767.1mRNA_S-dermatodea_contig979.17767.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig979 15875..17108 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig979.17767.1 ID=prot_S-dermatodea_contig979.17767.1|Name=mRNA_S-dermatodea_contig979.17767.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=149bp
MPTGHIPPQLGNLSALEILDLRSNKLNELSNFIFIPRQIRIALLLAGPIP
PELRSLSALEYLDLDDNQLSGPIPKELGALSMLETLLLHGNKLTGEIPAS
LGQLVKLETLVLTENKLSGECPIPPELGKLAALKALLLWSNQLTGEKIC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf