prot_S-dermatodea_contig97760.17760.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig97760.17760.1
Unique Nameprot_S-dermatodea_contig97760.17760.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length55
Homology
BLAST of mRNA_S-dermatodea_contig97760.17760.1 vs. uniprot
Match: A0A6H5JA90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA90_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 1.180e-28
Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 LDFVVTDGVRYDTGPDGAFYHALVTHVREADKAGNIITYRQEPDGTLIKTGVVEK 55
            LDFVVTDGVRYDTGP+G FYHA+VTHVREADKAGNIITYRQE DGTLIKTG++EK
Sbjct:    5 LDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGIIEK 59          
BLAST of mRNA_S-dermatodea_contig97760.17760.1 vs. uniprot
Match: D8LCD2_ECTSI (CBM_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD2_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 5.060e-27
Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 LDFVVTDGVRYDTGPDGAFYHALVTHVREADKAGNIITYRQEPDGTLIKTGVVEK 55
            LDFVVTDGVRYDTGP+G FYHA+VTHVREADKAGNIITYRQE DGTLIKTG++EK
Sbjct:  171 LDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEK 225          
BLAST of mRNA_S-dermatodea_contig97760.17760.1 vs. uniprot
Match: A0A835YX15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX15_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.290e-17
Identity = 36/54 (66.67%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 LDFVVTDGVRYDTGPDGAFYHALVTHVREADKAGNIITYRQEPDGTLIKTGVVE 54
            LDF VTDG+RYD GPD AFYH  VTH+RE D AGNI  YRQ+ DGTL   G++E
Sbjct:   87 LDFTVTDGIRYDMGPDDAFYHIRVTHIREEDDAGNIRLYRQDEDGTLTYEGMIE 140          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig97760.17760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JA90_9PHAE1.180e-2889.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCD2_ECTSI5.060e-2789.09CBM_25 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YX15_9STRA1.290e-1766.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig97760contigS-dermatodea_contig97760:249..413 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig97760.17760.1mRNA_S-dermatodea_contig97760.17760.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig97760 249..413 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig97760.17760.1 ID=prot_S-dermatodea_contig97760.17760.1|Name=mRNA_S-dermatodea_contig97760.17760.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=55bp
LDFVVTDGVRYDTGPDGAFYHALVTHVREADKAGNIITYRQEPDGTLIKT
GVVEK
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