prot_S-dermatodea_contig9724.17722.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9724.17722.1
Unique Nameprot_S-dermatodea_contig9724.17722.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length352
Homology
BLAST of mRNA_S-dermatodea_contig9724.17722.1 vs. uniprot
Match: D7FND7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FND7_ECTSI)

HSP 1 Score: 372 bits (955), Expect = 2.170e-120
Identity = 216/358 (60.34%), Postives = 255/358 (71.23%), Query Frame = 0
Query:    1 LFPPARVRQALMTTVSQ---APAPAEGGGELPRPLWLLGGPGGKTIIELVLLNLLRGGVDRVVIVVG-QDGAKIRQAVRRSGATE--KLKIEFLDDHTESSRQFHAKAILRAKDMATTAVFVRRAAAESGAGAGAGQPLLGKVGSDEEATGAGDYQATRRVMAIGRREQGQRQRWDGVECGALVLSPEIFETLSALGKRRRYYTLADGLDIMAGQGMLRSVSTEGKPWLALETKAQLQHGHQALVQGLVNQADLFPWEHNPPKASIGSAAXXXXXXXXXEDFENGQHGHQRRISLNVDPPAHDESEDPSNAPDFKGFIVPVEGGAEGAGAGASVSEDTSFLARGHSLRRRVSLEDAMV 352
            ++PP+ VRQALMTTVS+   AP  AE G E+PRPLWLLGG GGKTI+ELVLLNL+R G+DRVVIVVG +DG KIR AV R+ A    K+ IEFL+D  + SRQFHAK+ILRA+DMA TAVFVRRA A+S   A A  P  G+ GS E        QA+RRVMAIGRREQG+RQRWDGVECGA++LSPEIF+TLS LGKRR+Y+TLADGLD MAG GMLRS+ST GKPWLALETKAQL+ G+++LVQGLVNQA+ FPWE  P ++   + A                           DP A D  ED S APDFKGF+VPV G A     G   ++D++FL RGH+LRRRVSLE   V
Sbjct:  103 MYPPSGVRQALMTTVSRPANAPGKAEDG-EVPRPLWLLGGSGGKTIVELVLLNLVRSGIDRVVIVVGGKDGDKIRDAVSRTRAVSAGKITIEFLEDPADPSRQFHAKSILRARDMAPTAVFVRRAEADS---ASAASPSAGETGSAEN-------QASRRVMAIGRREQGKRQRWDGVECGAILLSPEIFDTLSDLGKRRKYFTLADGLDFMAGGGMLRSISTAGKPWLALETKAQLRRGNESLVQGLVNQAEPFPWESKPARSDSAAGA---------------------------DPDA-DTEEDDSTAPDFKGFVVPV-GAAAPEAVGVPAADDSAFLTRGHALRRRVSLEGVTV 420          
BLAST of mRNA_S-dermatodea_contig9724.17722.1 vs. uniprot
Match: A0A6H5JNI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI3_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 2.760e-70
Identity = 145/263 (55.13%), Postives = 172/263 (65.40%), Query Frame = 0
Query:    1 LFPPARVRQALMTTVSQAPAPAEG---GGELPRPLWLLGGPGGKTIIELVLLNLLRGGVDRVVIVVG-QDGAKIRQAVRRSGATE--KLKIEFLDDHTESSRQFHAKAILRAK------------------------------------------------DMATTAVFVRRAAAESGAGAGAGQPLLGKVGSDEEATGAGDYQATRRVMAIGRREQGQRQRWDGVECGALVLSPEIFETLSALGKRRRYYTLADGLDIMAGQ 209
            ++PP+ VRQALMTTVS+ PA A G    GE+PRPLWLLGG GGKTI+ELVLLNL+R G+DRVVIVVG +DG KIR AV R+ A    K+ IEFL+D T+ SRQFHAK+ILRA+                                                DMA TAVFVRRA A+S   A A  P  G+ GS E+       QA+RRVMAIGRREQG+RQ+WDGVECGA++LSPEIF+TLS LGKRR+Y+TLADGLD MAG+
Sbjct:   87 MYPPSGVRQALMTTVSR-PANASGKAEDGEVPRPLWLLGGSGGKTIVELVLLNLVRSGIDRVVIVVGGKDGDKIRDAVSRTRAVSAGKITIEFLEDPTDPSRQFHAKSILRARGAFDSPFLFMTSDHLYHPGLLHQLAGQELGEDGGCVLVEDAAGPSSLRDMAPTAVFVRRAEADS---ASAALPSAGETGSAEK-------QASRRVMAIGRREQGKRQKWDGVECGAILLSPEIFDTLSDLGKRRKYFTLADGLDFMAGK 338          
BLAST of mRNA_S-dermatodea_contig9724.17722.1 vs. uniprot
Match: A0A6H5JIJ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIJ2_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 9.670e-14
Identity = 66/153 (43.14%), Postives = 84/153 (54.90%), Query Frame = 0
Query:  222 WLALETKAQLQHGHQALVQGLVNQADLFPWEHNPPKASIGSAAXXXXXXXXXEDFENGQH----------GHQRRISLNVDPPAHDES------------EDPSNAPDFKGFIVPVEGGAEGAGAGASVSEDTSFLARGHSLRRRVSLEDAMV 352
            +L    +AQL+ G+++LVQGLV+QA+ FPWE      +  S AXXXXXXXXX                  GH R +SL++D                   ED S APDFKGF+VPVE  A  A  G   ++D++FL RGH+LRRRVSLE   V
Sbjct:    5 FLLFRCQAQLRRGNESLVQGLVSQAEPFPWESKHAAPAGNSTAXXXXXXXXXXXXXXXXXXXXXXXXXXAGHGRHLSLHLDAXXXXXXXXXXXXXXXXXXEDESTAPDFKGFVVPVETSAPEA-VGVPAADDSAFLTRGHALRRRVSLEGVTV 156          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9724.17722.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FND7_ECTSI2.170e-12060.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JNI3_9PHAE2.760e-7055.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JIJ2_9PHAE9.670e-1443.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 24..245
e-value: 1.3E-10
score: 43.3
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 28..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9724contigS-dermatodea_contig9724:579..8156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9724.17722.1mRNA_S-dermatodea_contig9724.17722.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9724 579..8156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9724.17722.1 ID=prot_S-dermatodea_contig9724.17722.1|Name=mRNA_S-dermatodea_contig9724.17722.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=352bp
LFPPARVRQALMTTVSQAPAPAEGGGELPRPLWLLGGPGGKTIIELVLLN
LLRGGVDRVVIVVGQDGAKIRQAVRRSGATEKLKIEFLDDHTESSRQFHA
KAILRAKDMATTAVFVRRAAAESGAGAGAGQPLLGKVGSDEEATGAGDYQ
ATRRVMAIGRREQGQRQRWDGVECGALVLSPEIFETLSALGKRRRYYTLA
DGLDIMAGQGMLRSVSTEGKPWLALETKAQLQHGHQALVQGLVNQADLFP
WEHNPPKASIGSAAAAAATAAAAEDFENGQHGHQRRISLNVDPPAHDESE
DPSNAPDFKGFIVPVEGGAEGAGAGASVSEDTSFLARGHSLRRRVSLEDA
MV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans