prot_S-dermatodea_contig9704.17704.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9704.17704.1
Unique Nameprot_S-dermatodea_contig9704.17704.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length257
Homology
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BLAST of mRNA_S-dermatodea_contig9704.17704.1 vs. uniprot
Match: A0A6H5K7W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7W6_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 2.480e-27
Identity = 57/89 (64.04%), Postives = 68/89 (76.40%), Query Frame = 0 
Query:  139 ERFNIVVVIEGHSDTSTALVFEDIANTVQDGLDALGYLTRIVYCVNLATDPCFTEGEQLLVLAAHNLASYFTPQGALAVLEGNLLPQDA 227
            +R ++VVV+EG SD +TALVF DIA TVQDGL  LG+ +RIVYC NL TD CF +G + ++LA HNLASYFT  G LAVLE  LLP DA
Sbjct:   22 QRIDVVVVLEGPSDQTTALVFRDIAETVQDGLQNLGHPSRIVYCTNLVTDHCFAKGGKFIILAPHNLASYFTGDGGLAVLEKKLLPPDA 110
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9704.17704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K7W6_9PHAE2.480e-2764.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9704contigS-dermatodea_contig9704:513..1449 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9704.17704.1mRNA_S-dermatodea_contig9704.17704.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9704 170..1456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9704.17704.1 ID=prot_S-dermatodea_contig9704.17704.1|Name=mRNA_S-dermatodea_contig9704.17704.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=257bp
MCEPTAWLLAASSSGAPQGGEFFHYTRVLWSYREAFQGPLIAMAWPADDS
PCSTERLNASTEHLNSYPSLIMFDTETARQFPIPNAQDGGIRVWVEAATR
RSMVYLGSQYFRHVTGVRPENSDLNLARANTHCPAGHCERFNIVVVIEGH
SDTSTALVFEDIANTVQDGLDALGYLTRIVYCVNLATDPCFTEGEQLLVL
AAHNLASYFTPQGALAVLEGNLLPQDAGEISHQEKNVRIVEQVPRYHVGF
NFFRLL*
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