prot_S-dermatodea_contig9693.17694.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9693.17694.1
Unique Nameprot_S-dermatodea_contig9693.17694.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length138
Homology
BLAST of mRNA_S-dermatodea_contig9693.17694.1 vs. uniprot
Match: D8LQC7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC7_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.030e-62
Identity = 95/131 (72.52%), Postives = 115/131 (87.79%), Query Frame = 0
Query:    1 MACYRYSRAIRVLAVLDAVVVLYGASAFTPLILMMWGPIAGYMSSNFQLRSAYAFLFYYGLRVSWDIGWLLSGGITWIVVWVFLVTDAAASALVYFYLAMLRKCTPAEVEQLRHPATPWASAFFPLTVPGT 131
            MAC+RYSR +RVLA+LDA++VL GASAFTPLILM+WGPIAGY++SNF+LR+A+ FLFYYGLR+SWDIGW+LSGGI W+VVWVFL TD AAS LVYF++ +L +C+ AEVE LR P T WASAFFPL+V  T
Sbjct:   92 MACHRYSRVVRVLAILDAIIVLCGASAFTPLILMIWGPIAGYLASNFRLRAAFTFLFYYGLRISWDIGWILSGGIKWVVVWVFLFTDVAASGLVYFFVVLLCRCSTAEVEHLRDPNTAWASAFFPLSVGAT 222          
BLAST of mRNA_S-dermatodea_contig9693.17694.1 vs. uniprot
Match: A0A6V1TFA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TFA5_HETAK)

HSP 1 Score: 67.4 bits (163), Expect = 6.580e-11
Identity = 44/124 (35.48%), Postives = 70/124 (56.45%), Query Frame = 0
Query:    4 YRYSRAIRVLAVLDAVVVLYGASAFTPLILMMWGPIAGYM-SSNFQLRSAYAFLFYYGLRVSWDIGWLLSGGITWIVVWVFLVTDAAASALVYFYLAMLRKCTPAEVEQLRHPATPWASA--FF 124
            Y   R +RV+A++D +++L+    F    ++MWGP+AGY+ SS F+      +  YY L+++ DI ++L G   ++ V   LV D   +  VY   A+L    PAE+E LR P+  W+ A  FF
Sbjct:  106 YSLGRGVRVIALIDGMILLFDCLLFPVFFVLMWGPLAGYLGSSYFRFSFVTCYFLYYVLKMAADIIFILYGAWWFLAV---LVIDLWIARWVYMLAALLWVANPAELEALRAPSHMWSRARQFF 226          
BLAST of mRNA_S-dermatodea_contig9693.17694.1 vs. uniprot
Match: A0A836CJB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJB9_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 9.700e-8
Identity = 42/130 (32.31%), Postives = 68/130 (52.31%), Query Frame = 0
Query:    1 MACYRYSRAIRVLAVLDAV------VVLYGASAFTPLILMMWGPIAGYMSS-NFQLRSAYAFLFYYGLRVSWDIGWLLSGGITWIVVWVFLVTDAAASALVYFYLAMLRKCTPAEVEQLRHPATP-WASA 122
            M  Y  +R+I+VL+++DA+      V  +G   F  ++ + WGP  GY S+ ++ + SA  +L YY ++V  D+G L   G   I+    L  D+     VY Y   L + +P+E+E L+    P W SA
Sbjct:   48 METYSLARSIKVLSMIDAILLTFNAVFFWGPLFFIVMLALAWGPACGYYSAKHYHIHSARGYLVYYVIKVLTDVGRLFVAGFWSIIP---LAIDSYIGRCVYVYCKRLTEASPSELEGLQSSPNPAWESA 174          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9693.17694.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LQC7_ECTSI1.030e-6272.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1TFA5_HETAK6.580e-1135.48Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CJB9_9STRA9.700e-832.31Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..98
NoneNo IPR availableTMHMMTMhelixcoord: 77..99
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9693contigS-dermatodea_contig9693:4826..6020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9693.17694.1mRNA_S-dermatodea_contig9693.17694.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9693 200..7621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9693.17694.1 ID=prot_S-dermatodea_contig9693.17694.1|Name=mRNA_S-dermatodea_contig9693.17694.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=138bp
MACYRYSRAIRVLAVLDAVVVLYGASAFTPLILMMWGPIAGYMSSNFQLR
SAYAFLFYYGLRVSWDIGWLLSGGITWIVVWVFLVTDAAASALVYFYLAM
LRKCTPAEVEQLRHPATPWASAFFPLTVPGTLPASAS*
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