prot_S-dermatodea_contig96539.17664.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig96539.17664.1
Unique Nameprot_S-dermatodea_contig96539.17664.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length56
Homology
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: D7G8U2_ECTSI (1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8U2_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 9.670e-27
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            MGVTVADARFMKPLDVDLIRRLA EHDAMLT+EENA+GGFGAHVLHFMVLDGL+DD
Sbjct:  681 MGVTVADARFMKPLDVDLIRRLAGEHDAMLTVEENAVGGFGAHVLHFMVLDGLVDD 736          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: A0A0G4GWE9_VITBC (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GWE9_VITBC)

HSP 1 Score: 97.4 bits (241), Expect = 2.790e-22
Identity = 44/56 (78.57%), Postives = 51/56 (91.07%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            +GVTVADARFM+PLD+DLIRRLAR H AM+T+EE ++GGFG HVLHFM LDGLLDD
Sbjct:  621 LGVTVADARFMRPLDIDLIRRLARTHRAMVTVEEGSVGGFGDHVLHFMALDGLLDD 676          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: A0A7S1E6U3_9STRA (Hypothetical protein n=2 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E6U3_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 8.830e-22
Identity = 40/56 (71.43%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            +GVTVADAR+MKPLDVDLIR+L  +H  ++TIEE +IGGFG HVLHF+ LDGL+DD
Sbjct:   31 LGVTVADARYMKPLDVDLIRQLVDDHSVLITIEEGSIGGFGDHVLHFITLDGLMDD 86          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: A0A3G5BBY2_HASOS (1-deoxy-D-xylulose-5-phosphate synthase (Fragment) n=1 Tax=Haslea ostrearia TaxID=67476 RepID=A0A3G5BBY2_HASOS)

HSP 1 Score: 93.6 bits (231), Expect = 2.710e-21
Identity = 43/56 (76.79%), Postives = 50/56 (89.29%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            +GVTVADARFMKPLDVDL+R+LA EH  ++TIEE +IGGFG HVLHF+ LDGLLDD
Sbjct:  265 IGVTVADARFMKPLDVDLVRQLADEHSVLITIEEGSIGGFGDHVLHFLSLDGLLDD 320          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: A0A835ZBE2_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBE2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 3.150e-21
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            +GVTVADARFMKPLDV+LIR LAR H  ++T+EE A+GGFG HVLHFM LDGLLDD
Sbjct:  426 LGVTVADARFMKPLDVELIRDLARRHSVLVTVEEGAVGGFGDHVLHFMALDGLLDD 481          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: A0A7S2YSG5_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSG5_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 8.600e-21
Identity = 41/56 (73.21%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            +GVTVADARFMKPLDVDL+R LA EH  ++T+EE +IGGFG HVLHF+ LDGL+DD
Sbjct:  626 LGVTVADARFMKPLDVDLVRELADEHSVLITVEEGSIGGFGDHVLHFLTLDGLMDD 681          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: A0A7S0AYA0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AYA0_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 2.850e-20
Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            + VTVADARFMKPLD+D+IR LA E+  ++T+EE +IGGFG HVLHF+ LDG LDD
Sbjct:   33 IAVTVADARFMKPLDIDMIRELADENGVLITVEEGSIGGFGDHVLHFLTLDGALDD 88          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: A0A7S2XUY7_9STRA (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUY7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 4.080e-20
Identity = 42/56 (75.00%), Postives = 47/56 (83.93%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            + VTVADARFMKPLD+DLIR LA  H  ++TIEE A+GGFG HVLHFM LDGLLDD
Sbjct:  615 ISVTVADARFMKPLDIDLIRELAGNHKVLITIEEGAVGGFGDHVLHFMALDGLLDD 670          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: A0A7S4F189_CHRCT (1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F189_CHRCT)

HSP 1 Score: 91.3 bits (225), Expect = 4.080e-20
Identity = 40/56 (71.43%), Postives = 49/56 (87.50%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            +GVTVADARFMKPLD DL+ +LAREHD ++T+EE +IGGFG HVLHF+ L+G LDD
Sbjct:  622 IGVTVADARFMKPLDSDLVSKLAREHDVLITVEEGSIGGFGDHVLHFLALNGFLDD 677          
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Match: B7S452_PHATC (1-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S452_PHATC)

HSP 1 Score: 91.3 bits (225), Expect = 4.080e-20
Identity = 41/56 (73.21%), Postives = 48/56 (85.71%), Query Frame = 0
Query:    1 MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVLDGLLDD 56
            +GVTVAD RFMKPLDVDL+R LA EH  ++TIEE +IGGFG HVLHF+ LDG+LDD
Sbjct:  623 LGVTVADGRFMKPLDVDLVRELADEHSVLITIEEGSIGGFGDHVLHFLSLDGILDD 678          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig96539.17664.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8U2_ECTSI9.670e-2792.861-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Ec... [more]
A0A0G4GWE9_VITBC2.790e-2278.571-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Vi... [more]
A0A7S1E6U3_9STRA8.830e-2271.43Hypothetical protein n=2 Tax=Thalassionema nitzsch... [more]
A0A3G5BBY2_HASOS2.710e-2176.791-deoxy-D-xylulose-5-phosphate synthase (Fragment)... [more]
A0A835ZBE2_9STRA3.150e-2176.791-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Tr... [more]
A0A7S2YSG5_9STRA8.600e-2173.211-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Am... [more]
A0A7S0AYA0_9STRA2.850e-2067.86Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2XUY7_9STRA4.080e-2075.001-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Fi... [more]
A0A7S4F189_CHRCT4.080e-2071.431-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Ch... [more]
B7S452_PHATC4.080e-2073.211-deoxy-D-xylulose-5-phosphate synthase n=2 Tax=Ph... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IIGENE3D3.40.50.920coord: 1..54
e-value: 2.9E-15
score: 58.1
IPR009014Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain IISUPERFAMILY52922TK C-terminal domain-likecoord: 2..52
IPR033248Transketolase, C-terminal domainPFAMPF02780Transketolase_Ccoord: 2..50
e-value: 8.5E-12
score: 45.0
IPR005477Deoxyxylulose-5-phosphate synthasePANTHERPTHR43322FAMILY NOT NAMEDcoord: 2..55
NoneNo IPR availablePANTHERPTHR43322:SF31-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-LIKE PROTEINcoord: 2..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig96539contigS-dermatodea_contig96539:99..266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig96539.17664.1mRNA_S-dermatodea_contig96539.17664.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig96539 75..266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig96539.17664.1 ID=prot_S-dermatodea_contig96539.17664.1|Name=mRNA_S-dermatodea_contig96539.17664.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=56bp
MGVTVADARFMKPLDVDLIRRLAREHDAMLTIEENAIGGFGAHVLHFMVL
DGLLDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009014Transketo_C/PFOR_II
IPR033248Transketolase_C
IPR005477Dxylulose-5-P_synthase