prot_S-dermatodea_contig9636.17649.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9636.17649.1
Unique Nameprot_S-dermatodea_contig9636.17649.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length125
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9636.17649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 83..116
e-value: 0.0069
score: 25.6
coord: 41..74
e-value: 0.0038
score: 26.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 41..74
score: 9.293
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 83..116
score: 8.673
NoneNo IPR availablePFAMPF13424TPR_12coord: 48..113
e-value: 8.8E-18
score: 64.4
NoneNo IPR availablePFAMPF13374TPR_10coord: 11..37
e-value: 0.0026
score: 17.6
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 2..125
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 2..125
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..125
e-value: 5.3E-39
score: 136.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..112
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 41..116
score: 14.111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9636contigS-dermatodea_contig9636:1741..2115 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9636.17649.1mRNA_S-dermatodea_contig9636.17649.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9636 1741..2116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9636.17649.1 ID=prot_S-dermatodea_contig9636.17649.1|Name=mRNA_S-dermatodea_contig9636.17649.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=125bp
TLHGLGVCALKAERTGEAEGLFERALTSWDEALGPRHLNTARTLHQLGVC
AYDAGQMEKADALYRRALAIREENLGAGHTDVAATMHNLGVCAWKAGRTE
QAEELYRKALEIRVEKLGEEHLHVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom