prot_S-dermatodea_contig96234.17640.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig96234.17640.1
Unique Nameprot_S-dermatodea_contig96234.17640.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length46
Homology
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: A0A6H5JWJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ8_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 7.380e-13
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0
Query:    8 QVSCGARHTLAITSDGQLFAWGDNRRGQCGLPWP 41
            QVSCGA+HTL ITS+G LFAWGDNR GQCGLPWP
Sbjct:  544 QVSCGAKHTLVITSEGHLFAWGDNRYGQCGLPWP 577          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 4.800e-12
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0
Query:    8 QVSCGARHTLAITSDGQLFAWGDNRRGQCGLPW 40
            QVSCGA+HTL ITS+G LFAWGDNR GQCGLPW
Sbjct:  867 QVSCGAKHTLVITSEGHLFAWGDNRYGQCGLPW 899          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: F4Q620_CAVFA (Regulator of chromosome condensation domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q620_CAVFA)

HSP 1 Score: 54.3 bits (129), Expect = 2.730e-7
Identity = 20/31 (64.52%), Postives = 27/31 (87.10%), Query Frame = 0
Query:    9 VSCGARHTLAITSDGQLFAWGDNRRGQCGLP 39
            V+CG++HTL++T DG ++AWG NR GQCGLP
Sbjct:  312 VACGSKHTLSLTCDGAVYAWGSNRNGQCGLP 342          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: A0A1B6H5G9_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6H5G9_9HEMI)

HSP 1 Score: 52.8 bits (125), Expect = 6.260e-7
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    8 QVSCGARHTLAITSDGQLFAWGDNRRGQCG 37
            QV+CG  HTLA+T DG+L+ WGDNRRGQ G
Sbjct:  185 QVACGQHHTLALTEDGRLYGWGDNRRGQLG 214          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: A0A6P8SAN2_GEOSA (E3 ISG15--protein ligase HERC5-like isoform X1 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8SAN2_GEOSA)

HSP 1 Score: 53.1 bits (126), Expect = 6.980e-7
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    8 QVSCGARHTLAITSDGQLFAWGDNRRGQCGL 38
            QVSCG RH+LA++ DGQLFAWG+N  GQ GL
Sbjct:  136 QVSCGERHSLALSKDGQLFAWGENTHGQLGL 166          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: A0A1B6EUU4_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6EUU4_9HEMI)

HSP 1 Score: 52.0 bits (123), Expect = 8.240e-7
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    8 QVSCGARHTLAITSDGQLFAWGDNRRGQCG 37
            QV+CG  HTLA+T DG+L+ WGDNRRGQ G
Sbjct:   76 QVACGQHHTLALTVDGRLYGWGDNRRGQLG 105          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: UPI001EE9B12C (secretion-regulating guanine nucleotide exchange factor-like n=1 Tax=Homalodisca vitripennis TaxID=197043 RepID=UPI001EE9B12C)

HSP 1 Score: 52.8 bits (125), Expect = 9.480e-7
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 0
Query:    8 QVSCGARHTLAITSDGQLFAWGDNRRGQCG 37
            QV+CG  HTLA+T DG+L+ WGDNRRGQ G
Sbjct:  197 QVACGQHHTLALTEDGRLYGWGDNRRGQLG 226          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: A0A1B6LKJ4_9HEMI (Uncharacterized protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6LKJ4_9HEMI)

HSP 1 Score: 52.0 bits (123), Expect = 1.770e-6
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 0
Query:    8 QVSCGARHTLAITSDGQLFAWGDNRRGQCG 37
            QV+CG  HTLA+T+DG+++ WGDNRRGQ G
Sbjct:  198 QVACGQHHTLALTADGRVYGWGDNRRGQLG 227          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: UPI001C924AE0 (E3 ubiquitin-protein ligase HERC2-like isoform X1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C924AE0)

HSP 1 Score: 52.0 bits (123), Expect = 1.790e-6
Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 0
Query:    9 VSCGARHTLAITSDGQLFAWGDNRRGQCGLP 39
            V+ G RHT+A+TSDG+LF WGDN RGQ G+P
Sbjct:  295 VAAGLRHTVAVTSDGRLFVWGDNSRGQLGVP 325          
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Match: A0A3S2N2M3_ORYJA (HECT domain-containing protein n=4 Tax=Oryzias TaxID=8089 RepID=A0A3S2N2M3_ORYJA)

HSP 1 Score: 52.0 bits (123), Expect = 1.790e-6
Identity = 19/33 (57.58%), Postives = 29/33 (87.88%), Query Frame = 0
Query:    6 LGQVSCGARHTLAITSDGQLFAWGDNRRGQCGL 38
            + QV+CG+RHT+A+T +GQ+++WG+N RGQ GL
Sbjct:  123 VSQVTCGSRHTVALTKEGQVYSWGENSRGQLGL 155          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig96234.17640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWJ8_9PHAE7.380e-1385.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTN1_ECTSI4.800e-1284.85Similar to hect domain and RLD 4 n=1 Tax=Ectocarpu... [more]
F4Q620_CAVFA2.730e-764.52Regulator of chromosome condensation domain-contai... [more]
A0A1B6H5G9_9HEMI6.260e-770.00Uncharacterized protein (Fragment) n=1 Tax=Homalod... [more]
A0A6P8SAN2_GEOSA6.980e-770.97E3 ISG15--protein ligase HERC5-like isoform X1 n=2... [more]
A0A1B6EUU4_9HEMI8.240e-770.00Uncharacterized protein (Fragment) n=1 Tax=Cuerna ... [more]
UPI001EE9B12C9.480e-770.00secretion-regulating guanine nucleotide exchange f... [more]
A0A1B6LKJ4_9HEMI1.770e-666.67Uncharacterized protein n=1 Tax=Graphocephala atro... [more]
UPI001C924AE01.790e-667.74E3 ubiquitin-protein ligase HERC2-like isoform X1 ... [more]
A0A3S2N2M3_ORYJA1.790e-657.58HECT domain-containing protein n=4 Tax=Oryzias Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 2..46
e-value: 2.2E-13
score: 51.5
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 8..38
NoneNo IPR availablePFAMPF13540RCC1_2coord: 8..35
e-value: 5.0E-13
score: 48.5
NoneNo IPR availablePANTHERPTHR45622FAMILY NOT NAMEDcoord: 6..38
NoneNo IPR availablePANTHERPTHR45622:SF23coord: 6..38
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 9..19
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 23..46
score: 8.595

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig96234contigS-dermatodea_contig96234:345..482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig96234.17640.1mRNA_S-dermatodea_contig96234.17640.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig96234 345..482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig96234.17640.1 ID=prot_S-dermatodea_contig96234.17640.1|Name=mRNA_S-dermatodea_contig96234.17640.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=46bp
AAVAALGQVSCGARHTLAITSDGQLFAWGDNRRGQCGLPWPPSSPS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens