prot_S-dermatodea_contig962.17634.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig962.17634.1
Unique Nameprot_S-dermatodea_contig962.17634.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length316
Homology
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: D7FVY3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY3_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 1.550e-48
Identity = 92/104 (88.46%), Postives = 96/104 (92.31%), Query Frame = 0
Query:    1 QLPSVLRLWLEPAADGCAFLPSPQRSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVFRTPRRLPVSPFSPHNHASPRPRRP 104
            QLP+VLRLWLE A DG  FLP PQR+SLLKVLM LPVQKSHLRESGIGKLVVAMAADPGETR+NRELIKQI+RRWSQLVFRTPR LPVSPFSPHNHASP PRRP
Sbjct: 1304 QLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAADPGETRDNRELIKQIVRRWSQLVFRTPRELPVSPFSPHNHASPIPRRP 1407          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A6H5L6K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K9_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 2.450e-45
Identity = 90/105 (85.71%), Postives = 94/105 (89.52%), Query Frame = 0
Query:    1 QLPSVLRLWLEPAADGCAFLPSPQRSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQI-IRRWSQLVFRTPRRLPVSPFSPHNHASPRPRRP 104
            QLP+VLRLWLE A DG  FLP PQR+SLLKVLM LPVQKSHLRESGIGKLVVAMAA PGETR+NRELIKQ  IRRWSQLVF+TPR LPVSPFSPHNHASP PRRP
Sbjct: 1308 QLPTVLRLWLEVAPDGGPFLPPPQRASLLKVLMVLPVQKSHLRESGIGKLVVAMAAGPGETRDNRELIKQARIRRWSQLVFKTPRELPVSPFSPHNHASPMPRRP 1412          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A098VQT2_9MICR (TFIIS N-terminal domain-containing protein n=1 Tax=Mitosporidium daphniae TaxID=1485682 RepID=A0A098VQT2_9MICR)

HSP 1 Score: 72.0 bits (175), Expect = 9.140e-11
Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    6 LRLWLEPAADGCAFLPSPQ-RSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVF 80
            +RLWLEP  DG   LPS   R S+L +L  LP++K HL+ESG+GK+V+ +   P ETREN++L  ++I +WS+ + 
Sbjct:  150 IRLWLEPYPDGS--LPSIDVRKSILHILAQLPIEKIHLKESGLGKVVMYLYKSPDETRENKKLAYKLIDKWSRPII 223          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A2D4BW91_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW91_PYTIN)

HSP 1 Score: 69.3 bits (168), Expect = 2.460e-9
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    1 QLPSVLRLWLEPAADGCAFLPS-PQRSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVF 80
             L S ++ W++P  DG   LP+   R+ LL ++  LPV K HL+ SG GK+V+ +   P ETREN+EL + +I RWS+ VF
Sbjct:  788 DLLSFIKKWIQPLDDGT--LPNLGVRTKLLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRENKELCRDLIERWSRAVF 866          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A1Y1WJ92_9FUNG (TFIIS N-terminal domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WJ92_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 3.040e-9
Identity = 34/77 (44.16%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    6 LRLWLEPAADGCAFLPSPQ-RSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVFR 81
            LRLWLEP  DG   LP+   +++LL +L  LP+++ HLRESGIGK+++ M+  P     NR + +Q ++RWS++V +
Sbjct:  187 LRLWLEPLDDGS--LPALDIQNALLDILGKLPIRRDHLRESGIGKIIMFMSKCPRIPERNRRVCEQFVQRWSRMVMK 261          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A662WYV3_9STRA (TFIIS N-terminal domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYV3_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 4.140e-9
Identity = 32/80 (40.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    2 LPSVLRLWLEPAADGCAFLPSPQ-RSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVF 80
            L  +++ W++P  DG   LP+   R+ +L ++  +PV K HL+ SG+GK+V+ +   P ETREN+EL + ++ RWS+ VF
Sbjct:  256 LTQIVKKWIQPMEDGS--LPNVGVRTKMLDMISKMPVFKEHLKRSGLGKVVMILMKHPEETRENKELCRNLVERWSRSVF 333          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A2G5BER5_COERN (TFIIS N-terminal domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BER5_COERN)

HSP 1 Score: 66.2 bits (160), Expect = 9.850e-9
Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    6 LRLWLEPAADGCAFLPSPQ-RSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVFR 81
            +RLWLEP  DG   LPS   ++++L  L  LP+++ HLRESGIGK+++ M+  P  +  NR   +Q +++WS++V R
Sbjct:  143 IRLWLEPLDDGS--LPSLDIQNAMLNALRNLPIRRDHLRESGIGKIILFMSKCPRISEANRRTCEQFLQQWSRMVLR 217          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A484E3E2_BRELC (TFIIS N-terminal domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3E2_BRELC)

HSP 1 Score: 66.6 bits (161), Expect = 1.300e-8
Identity = 30/77 (38.96%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    5 VLRLWLEPAADGCAFLPSPQ-RSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVF 80
            +++ W++P  +G   LP+   R+ +L+++  +PV K HL+ SG+GK+V+ +   P ETREN+EL + ++ RWS+ VF
Sbjct:  234 IVKKWIQPLENGA--LPNVGLRTKMLEMVSKMPVFKEHLKRSGLGKVVMLLMKHPQETRENKELCRSLVERWSRAVF 308          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A8K1CB40_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CB40_PYTOL)

HSP 1 Score: 66.6 bits (161), Expect = 1.610e-8
Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    1 QLPSVLRLWLEPAADGCAFLPS-PQRSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVF 80
             L S ++ W++P  DG   LP+   R+ +L ++  LPV K HL+ SG GK+V+ +   P ETR+N++L + +I RWS+ VF
Sbjct:  424 DLLSFIKKWIQPLEDGT--LPNLGVRTKMLHMVARLPVMKEHLKRSGFGKVVMMLWKHPEETRDNKDLCRDLIERWSRAVF 502          
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Match: A0A5D6XSN7_9STRA (TFIIS N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSN7_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.620e-8
Identity = 32/81 (39.51%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    1 QLPSVLRLWLEPAADGCAFLPSPQ-RSSLLKVLMALPVQKSHLRESGIGKLVVAMAADPGETRENRELIKQIIRRWSQLVF 80
             L S+++ W+ P  DG   LP+   R+ +L ++  +P+ K HL+ SG GK+V+ +   P ETREN++L + +I RWS+ VF
Sbjct:  216 DLLSLIKKWIHPLDDGA--LPNVGIRTKMLNMVAEMPIYKEHLKRSGFGKVVMLLWKHPEETRENKDLCRDLIERWSRSVF 294          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig962.17634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FVY3_ECTSI1.550e-4888.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L6K9_9PHAE2.450e-4585.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A098VQT2_9MICR9.140e-1147.37TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A2D4BW91_PYTIN2.460e-944.44Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A1Y1WJ92_9FUNG3.040e-944.16TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A662WYV3_9STRA4.140e-940.00TFIIS N-terminal domain-containing protein (Fragme... [more]
A0A2G5BER5_COERN9.850e-942.86TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A484E3E2_BRELC1.300e-838.96TFIIS N-terminal domain-containing protein n=1 Tax... [more]
A0A8K1CB40_PYTOL1.610e-840.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XSN7_9STRA2.620e-839.51TFIIS N-terminal domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017923Transcription factor IIS, N-terminalPFAMPF08711Med26coord: 28..79
e-value: 6.5E-9
score: 35.7
IPR017923Transcription factor IIS, N-terminalPROSITEPS51319TFIIS_Ncoord: 4..82
score: 13.276
IPR035441TFIIS/LEDGF domain superfamilyGENE3D1.20.930.10coord: 1..83
e-value: 1.2E-17
score: 66.0
NoneNo IPR availablePANTHERPTHR46010FAMILY NOT NAMEDcoord: 4..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig962contigS-dermatodea_contig962:1724..4282 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig962.17634.1mRNA_S-dermatodea_contig962.17634.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig962 1724..4282 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig962.17634.1 ID=prot_S-dermatodea_contig962.17634.1|Name=mRNA_S-dermatodea_contig962.17634.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=316bp
QLPSVLRLWLEPAADGCAFLPSPQRSSLLKVLMALPVQKSHLRESGIGKL
VVAMAADPGETRENRELIKQIIRRWSQLVFRTPRRLPVSPFSPHNHASPR
PRRPIDMMDLDSSSGGTSTAAAAAAGRGKAWAAAVRSHRARSHERERAPP
PPFRATPPLEQTSRAGYGGAVGRSPSDSSRGHAASAAVAGSGDGGGGGRD
RPVVLYGAVRRAAQQGGSGPIPRRRPAKRPQSDESGGAGSGAGGAVAGHR
IPRLVREVSRGRGVGHDQVAFSSSRPKGTVRDSHPSSSSSSSSPRFGGGG
IRRDRGGGGGGGGGAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017923TFIIS_N
IPR035441TFIIS/LEDGF_dom_sf