prot_S-dermatodea_contig9619.17633.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9619.17633.1
Unique Nameprot_S-dermatodea_contig9619.17633.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length216
Homology
[Close]
BLAST of mRNA_S-dermatodea_contig9619.17633.1 vs. uniprot
Match: A0A6H5JI30_9PHAE (CRAL-TRIO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI30_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 4.620e-49
Identity = 111/213 (52.11%), Postives = 139/213 (65.26%), Query Frame = 0 
Query:    1 AVDPENEDEEGGIVRLGDAVLLVDDRGYVWNHNTHGLAGSVRMKPKGSKKEIAVTFNLPSGANPPQPDSKGLLPAVVFGVEGLGIEPVLGDGRDSRRRRINSGGVKKLEPLTAYSKKYSSGSSGVSGAFLCANGRGQAVVFEVHLPNASPIGDPSPVITKVIIHAEE--RSGGLQSPLPPALERL-----TSEAPTAPLSCVTVEGGSGGGDG 206
            AVDPEN+ ++G IVR GD + LVDDR YVW+ N H L GS+RMK +GSK++IAV+F  P  A P + D+   LPAVVF   GL I  V    +D   ++  +   K    LTA+SKK +SG+  V+GAFLCA+GRG+ VVFEVHLPN SPIGDPSPV+TKV +H +E  R     S L P   ++      SEA TAPLSCV  +G SG G G
Sbjct:  615 AVDPENKKKDGDIVRYGDVIFLVDDRNYVWSDNGHLLPGSLRMKSRGSKRQIAVSFK-PFLA-PLKLDANNELPAVVFSTHGLQIMTVEYGSKDQNIKKRRTSTRKNFHALTAFSKK-NSGNPSVNGAFLCADGRGEGVVFEVHLPNESPIGDPSPVVTKVTVHVDEKPRLHDKMSYLLPLSTKVHEAHWPSEALTAPLSCVAADG-SGTGQG 823
[Close]
BLAST of mRNA_S-dermatodea_contig9619.17633.1 vs. uniprot
Match: A0A484E928_BRELC (CRAL-TRIO domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E928_BRELC)

HSP 1 Score: 53.5 bits (127), Expect = 8.950e-5
Identity = 26/59 (44.07%), Postives = 37/59 (62.71%), Query Frame = 0 
Query:    4 PENEDEEGGIVRLGDAVLLVDDRGYVWNHNTHGLAGSVRMKPKGSKKEIAVTF-NLPSG 61
            P N+  EG  V  GDA++LV+ RG VWN+ T G+ G +  +P+G   EI V+F  +P G
Sbjct:   69 PSNQRTEGDKVFYGDALVLVNQRGMVWNNKTGGITGYIGPRPRGVPGEIFVSFIKVPEG 127
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9619.17633.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI30_9PHAE4.620e-4952.11CRAL-TRIO domain-containing protein n=1 Tax=Ectoca... [more]
A0A484E928_BRELC8.950e-544.07CRAL-TRIO domain-containing protein n=1 Tax=Bremia... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9619contigS-dermatodea_contig9619:4032..8204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9619.17633.1mRNA_S-dermatodea_contig9619.17633.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9619 4031..8204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9619.17633.1 ID=prot_S-dermatodea_contig9619.17633.1|Name=mRNA_S-dermatodea_contig9619.17633.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=216bp
AVDPENEDEEGGIVRLGDAVLLVDDRGYVWNHNTHGLAGSVRMKPKGSKK
EIAVTFNLPSGANPPQPDSKGLLPAVVFGVEGLGIEPVLGDGRDSRRRRI
NSGGVKKLEPLTAYSKKYSSGSSGVSGAFLCANGRGQAVVFEVHLPNASP
IGDPSPVITKVIIHAEERSGGLQSPLPPALERLTSEAPTAPLSCVTVEGG
SGGGDGPDRKRPQSEG
back to top