prot_S-dermatodea_contig9614.17629.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9614.17629.1
Unique Nameprot_S-dermatodea_contig9614.17629.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length142
Homology
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A7J7PNG1_9CHLO (Uncharacterized protein n=2 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PNG1_9CHLO)

HSP 1 Score: 111 bits (277), Expect = 1.560e-28
Identity = 62/78 (79.49%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRRVAYLPALR 78
            MLG+TPP AMVT P SLLSSSSLR ASWMWRG MR FLLSRAALPASSSTSA RYSST   YTGAP P R AYLP  R
Sbjct:   73 MLGSTPPLAMVTVPSSLLSSSSLRMASWMWRGTMRFFLLSRAALPASSSTSAARYSSTXXXYTGAPAPMRSAYLPFFR 150          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A443QTD9_9ACAR (Histone H3-like centromeric protein cpar-1 n=1 Tax=Leptotrombidium deliense TaxID=299467 RepID=A0A443QTD9_9ACAR)

HSP 1 Score: 97.4 bits (241), Expect = 4.840e-24
Identity = 56/72 (77.78%), Postives = 57/72 (79.17%), Query Frame = 0
Query:    1 MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRRVA 72
            MLG TPP AMVT P SLLSSSSLR AS  WRG+MR FLLSRAALPASS  SAVRYS TAA YTGAP P R A
Sbjct:    1 MLGRTPPCAMVTLPSSLLSSSSLRMASCRWRGMMRVFLLSRAALPASSRISAVRYSRTAARYTGAPAPTRSA 72          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: UPI000529366C (LOW QUALITY PROTEIN: histone H3.v1-like n=1 Tax=Mesitornis unicolor TaxID=54374 RepID=UPI000529366C)

HSP 1 Score: 104 bits (260), Expect = 7.570e-24
Identity = 69/112 (61.61%), Postives = 74/112 (66.07%), Query Frame = 0
Query:    1 MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRRVAYLPALRKRPMRLTGNCRPALLERVLLV-------FPRPAV 105
            MLG+TPP A+VT P SLLSSSSLR AS  WRG+MR FLLSRAALPASS  SAVRYSSTAA YTGAP        P    R  R TGNC PA  ER L +       FPRP +
Sbjct:  109 MLGSTPPCAIVTLPSSLLSSSSLRMASCRWRGMMRVFLLSRAALPASSRISAVRYSSTAARYTGAPPS---PEWPLGSSRCTRPTGNCSPARDERDLALARAFPPCFPRPDI 217          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A8C3LJX1_CHRPC (Histone H2A n=1 Tax=Chrysolophus pictus TaxID=9089 RepID=A0A8C3LJX1_CHRPC)

HSP 1 Score: 99.8 bits (247), Expect = 3.690e-23
Identity = 57/72 (79.17%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRRVA 72
            MLG+TPP AMVT P SLLSSSSLR AS  WRG+MR FLLSRAALPASS  SAVRYSSTAA YTGAP P R A
Sbjct:  159 MLGSTPPCAMVTLPSSLLSSSSLRMASCRWRGMMRVFLLSRAALPASSRISAVRYSSTAARYTGAPAPTRSA 230          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A5F9CKJ6_RABIT (Histone H2A n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=A0A5F9CKJ6_RABIT)

HSP 1 Score: 97.8 bits (242), Expect = 4.870e-23
Identity = 56/70 (80.00%), Postives = 58/70 (82.86%), Query Frame = 0
Query:    1 MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRR 70
            MLG+TPP AMVT P SLLSSSSLR AS  WRG+MR FLLSRAALPASS  SAVRYSSTAA YTGAP P R
Sbjct:   98 MLGSTPPCAMVTRPSSLLSSSSLRMASCRWRGMMRVFLLSRAALPASSRISAVRYSSTAARYTGAPAPTR 167          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A3L7IFK3_CRIGR (Uncharacterized protein n=1 Tax=Cricetulus griseus TaxID=10029 RepID=A0A3L7IFK3_CRIGR)

HSP 1 Score: 100 bits (248), Expect = 8.620e-22
Identity = 57/72 (79.17%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRRVA 72
            MLG TPP A+VT P SLLSSSSLR AS  WRG+MR FLLSRAALPASS  SAVRYSSTAAMYTGAP P R A
Sbjct:   65 MLGRTPPCAIVTLPSSLLSSSSLRMASCRWRGMMRVFLLSRAALPASSRISAVRYSSTAAMYTGAPAPTRSA 136          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A2T7EV39_9POAL (Uncharacterized protein n=2 Tax=PACMAD clade TaxID=147370 RepID=A0A2T7EV39_9POAL)

HSP 1 Score: 87.0 bits (214), Expect = 6.980e-20
Identity = 54/78 (69.23%), Postives = 56/78 (71.79%), Query Frame = 0
Query:    1 MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRRVAYLPALR 78
            MLG TPP AMVT   S  SSSSLR A    RG+MR FLLS AA PASSSTSA RYS TAA YTGAP+P R AY P LR
Sbjct:    1 MLGRTPPWAMVTPASSFPSSSSLRIARSTCRGMMRVFLLSLAAFPASSSTSAARYSRTAARYTGAPVPTRCAYRPFLR 78          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A2K3DNT0_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DNT0_CHLRE)

HSP 1 Score: 94.7 bits (234), Expect = 7.550e-20
Identity = 53/68 (77.94%), Postives = 55/68 (80.88%), Query Frame = 0
Query:    9 AMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRRVAYLPA 76
            AMVT P SL SSSSLR ASWMWRG MR FLLS AALPASSSTSAV+Y STAA YTGAP P R AY P+
Sbjct:  969 AMVTSPSSLPSSSSLRMASWMWRGTMRFFLLSGAALPASSSTSAVKYPSTAARYTGAPAPMRSAYCPS 1036          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A7C9CN91_OPUST (Uncharacterized protein n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9CN91_OPUST)

HSP 1 Score: 84.3 bits (207), Expect = 1.800e-18
Identity = 50/82 (60.98%), Postives = 54/82 (65.85%), Query Frame = 0
Query:   29 MWRGVMRAFLLSRAALPASSSTSAVRYSSTAAMYTGAPLPRRVAYLPALRKRPMRLTGNCRPALLERVLLVFPRPAVPLNFP 110
            M  G +R FLLS AA PA+S TSA RYS TAA YTGAP P R AY PA R R MR TGNC+PALL R +  F  P  P  FP
Sbjct:    1 MCLGTIRVFLLSLAAFPANSKTSAARYSRTAARYTGAPAPTRSAYFPAFRNRAMRPTGNCKPALLLRDVAFFAAPE-PRVFP 81          
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Match: A0A2J7ZRF6_9CHLO (Histone H3 n=6 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZRF6_9CHLO)

HSP 1 Score: 87.8 bits (216), Expect = 1.920e-17
Identity = 61/109 (55.96%), Postives = 70/109 (64.22%), Query Frame = 0
Query:    1 MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSSTSAVRYSS----TAAMYTGAPLPRRVAYLPALRKRPMRLTGNCRPALLERVLLVFPRPAV 105
            MLG+TPPDAMVT P SL SSSSLR ASWMWRG MR FLLSRAALPASSSTSAVR +     TA +    PLPR     PA     M ++G     L++  L + P+  V
Sbjct:  505 MLGSTPPDAMVTSPSSLPSSSSLRMASWMWRGTMRFFLLSRAALPASSSTSAVRPALALRLTAFLPDALPLPR-----PA-----MVMSGGDLSVLVQTPLAMAPKKTV 603          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9614.17629.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7J7PNG1_9CHLO1.560e-2879.49Uncharacterized protein n=2 Tax=Scenedesmus sp. NR... [more]
A0A443QTD9_9ACAR4.840e-2477.78Histone H3-like centromeric protein cpar-1 n=1 Tax... [more]
UPI000529366C7.570e-2461.61LOW QUALITY PROTEIN: histone H3.v1-like n=1 Tax=Me... [more]
A0A8C3LJX1_CHRPC3.690e-2379.17Histone H2A n=1 Tax=Chrysolophus pictus TaxID=9089... [more]
A0A5F9CKJ6_RABIT4.870e-2380.00Histone H2A n=1 Tax=Oryctolagus cuniculus TaxID=99... [more]
A0A3L7IFK3_CRIGR8.620e-2279.17Uncharacterized protein n=1 Tax=Cricetulus griseus... [more]
A0A2T7EV39_9POAL6.980e-2069.23Uncharacterized protein n=2 Tax=PACMAD clade TaxID... [more]
A0A2K3DNT0_CHLRE7.550e-2077.94Uncharacterized protein n=2 Tax=Chlamydomonas rein... [more]
A0A7C9CN91_OPUST1.800e-1860.98Uncharacterized protein n=1 Tax=Opuntia streptacan... [more]
A0A2J7ZRF6_9CHLO1.920e-1755.96Histone H3 n=6 Tax=Tetrabaena socialis TaxID=47790... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 53..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 36..44
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 45..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9614contigS-dermatodea_contig9614:2307..2732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9614.17629.1mRNA_S-dermatodea_contig9614.17629.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9614 1606..2758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9614.17629.1 ID=prot_S-dermatodea_contig9614.17629.1|Name=mRNA_S-dermatodea_contig9614.17629.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=142bp
MLGNTPPDAMVTFPRSLLSSSSLRTASWMWRGVMRAFLLSRAALPASSST
SAVRYSSTAAMYTGAPLPRRVAYLPALRKRPMRLTGNCRPALLERVLLVF
PRPAVPLNFPGGMVGEEGCRWCGVSRGLAGGRCAVLRRCIR*
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