prot_S-dermatodea_contig96113.17627.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig96113.17627.1
Unique Nameprot_S-dermatodea_contig96113.17627.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length174
Homology
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: A0A7S6ZPB4_9STRA (Light-independent protochlorophyllide reductase subunit B n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6ZPB4_9STRA)

HSP 1 Score: 351 bits (901), Expect = 9.510e-118
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALNS 173
            YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALNS
Sbjct:  336 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALNS 508          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: A0A0K2RWT8_9STRA (Light-independent protochlorophyllide reductase subunit B n=1 Tax=Triparma laevis TaxID=1534972 RepID=A0A0K2RWT8_9STRA)

HSP 1 Score: 295 bits (755), Expect = 1.030e-95
Identity = 139/173 (80.35%), Postives = 156/173 (90.17%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALNS 173
            YDK+W   +L GLCDE+I+TDDHNL+GDLIAK EP  IFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQI+DL+YNSFTLGMEDHLLEIFGGHDT+E I  SLS + DL W IEAQ EL+KIPGFVRGKI+RNTEKFA+Q+NI+ I LET+YAAKEA+N+
Sbjct:  336 YDKAWFTSQLEGLCDEVILTDDHNLVGDLIAKTEPEAIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQISDLVYNSFTLGMEDHLLEIFGGHDTREVITQSLSADSDLIWAIEAQNELTKIPGFVRGKIKRNTEKFAKQENIETITLETMYAAKEAVNT 508          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: A0A8E6D5T3_9PHAE (Light-independent protochlorophyllide reductase subunit B n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D5T3_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 2.830e-95
Identity = 141/172 (81.98%), Postives = 154/172 (89.53%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALN 172
            YDKSW EKE+ G+CDE+IITDDHNLI DLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKE I  SLS +  + W  EA+ EL+KIPGFVRG+I+RNTEKFAQQ  +Q + LE +YAAKEA+N
Sbjct:  336 YDKSWFEKEVGGMCDEVIITDDHNLIADLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEVINSSLSNDRHIIWDSEAKLELAKIPGFVRGRIKRNTEKFAQQNKLQRVTLEVMYAAKEAVN 507          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: A0A5B9RCD6_9PHAE (Light-independent protochlorophyllide reductase subunit B n=2 Tax=Laminaria TaxID=33637 RepID=A0A5B9RCD6_9PHAE)

HSP 1 Score: 287 bits (734), Expect = 1.080e-94
Identity = 138/173 (79.77%), Postives = 153/173 (88.44%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLST---EFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEA 170
            YDKSW EKE+  LCDEI+ITDDHNLIGDLIAKVEPAVIFGTQMERHV KRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKE +   LS      ++KW +E+Q EL+KIPGF+RGKI+RNTEKFAQ++ ++ I LE +YAAKEA
Sbjct:  168 YDKSWFEKEVGDLCDEIVITDDHNLIGDLIAKVEPAVIFGTQMERHVAKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEVLSAGLSVTSQNSEIKWNLESQAELTKIPGFIRGKIKRNTEKFAQEQKMETITLEIMYAAKEA 340          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: A0A141BSC8_9PHAE (Light-independent protochlorophyllide reductase subunit B n=12 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSC8_9PHAE)

HSP 1 Score: 291 bits (745), Expect = 3.490e-94
Identity = 141/175 (80.57%), Postives = 157/175 (89.71%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTE---FDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALN 172
            YDKSW EKE+  LC+EIIITDDHNLIGDLIAKVEPAVIFGTQMERHV KRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKE +  +LS     F++KW +EAQ+EL KIPGFVRGKI+RNTEKFAQ++ ++ I LE +YAAKEA++
Sbjct:  336 YDKSWFEKEIGDLCEEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVAKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEVLSPTLSVTNAPFEIKWNLEAQSELKKIPGFVRGKIKRNTEKFAQKEQLKTITLEVMYAAKEAIS 510          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: A0A2I4Q2A6_9PHAE (Light-independent protochlorophyllide reductase subunit B n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A6_9PHAE)

HSP 1 Score: 289 bits (740), Expect = 1.770e-93
Identity = 138/170 (81.18%), Postives = 152/170 (89.41%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEA 170
            YD++W E+E+  LC+EI+ITDDHNLIGDLIAKVEPAVIFGTQMERHV KRLNIPCGVISAPVHIQNFPLSYRPF GYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKE +   LS + ++ W IE+Q EL KIPGFVRGKI+RNTEKFAQQKN+ LI LE +YAAKEA
Sbjct:  336 YDRAWFEREVGDLCNEIVITDDHNLIGDLIAKVEPAVIFGTQMERHVAKRLNIPCGVISAPVHIQNFPLSYRPFFGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEVLSIGLSYDSEITWNIESQAELQKIPGFVRGKIKRNTEKFAQQKNLNLITLEVMYAAKEA 505          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: D1J784_ECTSI (Light-independent protochlorophyllide reductase subunit B n=43 Tax=Phaeophyceae TaxID=2870 RepID=D1J784_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 1.940e-93
Identity = 140/173 (80.92%), Postives = 153/173 (88.44%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLST---EFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEA 170
            YDKSW EKE+  LCDEI+ITDDHNLIGDLIAKVEPAVIFGTQMERHV KRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKE +   LS    E  +KW +E+Q EL+KIPGF+RGKI+RNTEKFAQ++ + LI LE +YAAKEA
Sbjct:  348 YDKSWFEKEVGDLCDEIVITDDHNLIGDLIAKVEPAVIFGTQMERHVAKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEILSAGLSVDSEELKIKWNLESQAELTKIPGFIRGKIKRNTEKFAQEQKMDLITLEVMYAAKEA 520          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: CHLB_CHLAT (Light-independent protochlorophyllide reductase subunit B n=1 Tax=Chlorokybus atmophyticus TaxID=3144 RepID=CHLB_CHLAT)

HSP 1 Score: 279 bits (713), Expect = 2.260e-89
Identity = 129/173 (74.57%), Postives = 151/173 (87.28%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALNS 173
            +D  W ++++ G CDE++ITDDH  +GDLIA++EP+ IFGTQMERH+GKRLNIPCGVISAPVHIQNFPL YRPFLGYEG NQIADL+YNSFTLGMEDHLLEIFGGHDTKE I  SLSTE  L WT +AQ ELSKIPGFVRGKI+RNTEKFA++ NI  I++E +YAAKE+LN+
Sbjct:  338 HDADWFKEQVQGYCDEVLITDDHTEVGDLIARIEPSAIFGTQMERHIGKRLNIPCGVISAPVHIQNFPLGYRPFLGYEGTNQIADLVYNSFTLGMEDHLLEIFGGHDTKEVITKSLSTEEGLTWTSDAQAELSKIPGFVRGKIKRNTEKFARENNISEINIEVMYAAKESLNA 510          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: CHLB_MESVI (Light-independent protochlorophyllide reductase subunit B n=1 Tax=Mesostigma viride TaxID=41882 RepID=CHLB_MESVI)

HSP 1 Score: 275 bits (702), Expect = 9.910e-88
Identity = 126/173 (72.83%), Postives = 150/173 (86.71%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALNS 173
            +D  W ++++ G CDE++ITD+H  +GDLIA+VEPA IFGTQMERH+GKRLNIPCGVISAPVHIQNFPL YRPFLGYEG NQIADL+YNSFTLGMEDHLLEIFGGHDTKE I   LST+ +L+WT E++ EL KIPGFVRGKI+RNTEKFA+Q N+  I +E +YAAKEA+N+
Sbjct:  337 HDADWFKEQVQGYCDEVLITDNHTEVGDLIARVEPAAIFGTQMERHIGKRLNIPCGVISAPVHIQNFPLGYRPFLGYEGTNQIADLVYNSFTLGMEDHLLEIFGGHDTKEVITKGLSTDSELRWTSESENELRKIPGFVRGKIKRNTEKFARQNNVTEITVEIMYAAKEAMNA 509          
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Match: A0A024B3S3_9VIRI (Light-independent protochlorophyllide reductase subunit B n=1 Tax=Mesotaenium endlicherianum TaxID=184485 RepID=A0A024B3S3_9VIRI)

HSP 1 Score: 273 bits (698), Expect = 4.630e-87
Identity = 124/173 (71.68%), Postives = 151/173 (87.28%), Query Frame = 0
Query:    1 YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKRLNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLLEIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKFAQQKNIQLIDLETIYAAKEALNS 173
            +D  W ++++ G CDE+++TDDH  +GD+IA+VEPA IFGTQMERH+GKRL+IPCGVISAPVHIQNFPL YRPFLGYEG NQIADL+YNSFTLGMEDHLLEIFGGHDTKE I  SLST+ DL W +++Q EL+KIPGFVRGKI+RNTEK+A+QK +  I +E +YAAKEAL++
Sbjct:  343 HDADWFKEQVHGYCDEVLVTDDHTEVGDMIARVEPAAIFGTQMERHIGKRLDIPCGVISAPVHIQNFPLGYRPFLGYEGTNQIADLVYNSFTLGMEDHLLEIFGGHDTKEVITKSLSTDSDLAWDVDSQLELNKIPGFVRGKIKRNTEKYARQKQVDKITVEIMYAAKEALSA 515          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig96113.17627.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6ZPB4_9STRA9.510e-118100.00Light-independent protochlorophyllide reductase su... [more]
A0A0K2RWT8_9STRA1.030e-9580.35Light-independent protochlorophyllide reductase su... [more]
A0A8E6D5T3_9PHAE2.830e-9581.98Light-independent protochlorophyllide reductase su... [more]
A0A5B9RCD6_9PHAE1.080e-9479.77Light-independent protochlorophyllide reductase su... [more]
A0A141BSC8_9PHAE3.490e-9480.57Light-independent protochlorophyllide reductase su... [more]
A0A2I4Q2A6_9PHAE1.770e-9381.18Light-independent protochlorophyllide reductase su... [more]
D1J784_ECTSI1.940e-9380.92Light-independent protochlorophyllide reductase su... [more]
CHLB_CHLAT2.260e-8974.57Light-independent protochlorophyllide reductase su... [more]
CHLB_MESVI9.910e-8872.83Light-independent protochlorophyllide reductase su... [more]
A0A024B3S3_9VIRI4.630e-8771.68Light-independent protochlorophyllide reductase su... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1980coord: 1..117
e-value: 3.4E-45
score: 155.9
NoneNo IPR availablePANTHERPTHR33712FAMILY NOT NAMEDcoord: 108..172
coord: 2..110
NoneNo IPR availablePANTHERPTHR33712:SF1coord: 108..172
coord: 2..110
NoneNo IPR availableSUPERFAMILY53807"Helical backbone" metal receptorcoord: 3..110
IPR013580Proto-chlorophyllide/chlorophyllide reductase, C-terminalPFAMPF08369PCP_redcoord: 124..168
e-value: 6.6E-16
score: 58.3
IPR042298Proto-chlorophyllide reductase, C-terminalGENE3D1.10.8.550coord: 122..173
e-value: 1.1E-20
score: 75.2
IPR000510Nitrogenase/oxidoreductase, component 1PFAMPF00148Oxidored_nitrocoord: 6..91
e-value: 9.7E-13
score: 47.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig96113contigS-dermatodea_contig96113:2..523 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig96113.17627.1mRNA_S-dermatodea_contig96113.17627.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig96113 2..523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig96113.17627.1 ID=prot_S-dermatodea_contig96113.17627.1|Name=mRNA_S-dermatodea_contig96113.17627.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=174bp
YDKSWVEKELLGLCDEIIITDDHNLIGDLIAKVEPAVIFGTQMERHVGKR
LNIPCGVISAPVHIQNFPLSYRPFLGYEGANQIADLIYNSFTLGMEDHLL
EIFGGHDTKEAIGGSLSTEFDLKWTIEAQTELSKIPGFVRGKIQRNTEKF
AQQKNIQLIDLETIYAAKEALNS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013580P-CP/CP_red_C
IPR042298P-CP_red_C
IPR000510Nase/OxRdtase_comp1