prot_S-dermatodea_contig9601.17621.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9601.17621.1
Unique Nameprot_S-dermatodea_contig9601.17621.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length206
Homology
BLAST of mRNA_S-dermatodea_contig9601.17621.1 vs. uniprot
Match: D8LJG4_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG4_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 3.090e-33
Identity = 70/93 (75.27%), Postives = 79/93 (84.95%), Query Frame = 0
Query:    2 EVSLLDVATVPGLIQWPLVPITTGELVSCGMLQQVVRACPSMLNDVKKRGLAVSLTTLQRTEAAADKRDEKELQELLARQALEANPTGQNDVG 94
            EVSLLDVA+VPGL  WPLVPITTGELVSC MLQQVVRACPSMLN+VK+RGL V+L  ++R E AAD+RDE ELQELLARQA EA+P G+   G
Sbjct: 1176 EVSLLDVASVPGLGSWPLVPITTGELVSCSMLQQVVRACPSMLNEVKQRGLGVALAAMERAEKAADERDENELQELLARQAQEADPGGEEGDG 1268          
BLAST of mRNA_S-dermatodea_contig9601.17621.1 vs. uniprot
Match: A0A6H5K688_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K688_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.880e-21
Identity = 50/62 (80.65%), Postives = 55/62 (88.71%), Query Frame = 0
Query:    2 EVSLLDVATVPGLIQWPLVPITTGELVSCGMLQQVVRACPSMLNDVKKRGLAVSLTTLQRTE 63
            EVSLLDVA+VPGL  WPLVPITTGELVSC MLQQVVRACPSMLN+VKKRGL V+L  ++R E
Sbjct: 3135 EVSLLDVASVPGLGSWPLVPITTGELVSCSMLQQVVRACPSMLNEVKKRGLEVALAAVERAE 3196          
BLAST of mRNA_S-dermatodea_contig9601.17621.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 7.960e-6
Identity = 26/51 (50.98%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    1 REVSLLDVATVPGLIQWPLVPITTGELVSCGMLQQVVRACPSMLN-DVKKR 50
            REV + D A V  L +WPLVPITTGEL SC +   + RACP  ++ D ++R
Sbjct: 4427 REVPMSDAALVAALHEWPLVPITTGELASCSLAPSIFRACPGAIHADTQRR 4477          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9601.17621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LJG4_ECTSI3.090e-3375.27RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K688_9PHAE1.880e-2180.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YL62_9STRA7.960e-650.98RING-type domain-containing protein n=1 Tax=Tribon... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9601contigS-dermatodea_contig9601:2712..4183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9601.17621.1mRNA_S-dermatodea_contig9601.17621.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9601 2712..4184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9601.17621.1 ID=prot_S-dermatodea_contig9601.17621.1|Name=mRNA_S-dermatodea_contig9601.17621.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=206bp
REVSLLDVATVPGLIQWPLVPITTGELVSCGMLQQVVRACPSMLNDVKKR
GLAVSLTTLQRTEAAADKRDEKELQELLARQALEANPTGQNDVGENGQRW
PDDEDDEEREEDAEATAGAGSGNGHPRERDRESGGSGAENELQSVGDSSS
LNSSEYADAFDDGAAGPSARPQDASSSHNPSGIASVNAPASSVAVGGGPA
ASGLRP
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