prot_S-dermatodea_contig95949.17612.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig95949.17612.1
Unique Nameprot_S-dermatodea_contig95949.17612.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length160
Homology
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6G0W3Y6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W3Y6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.200e-16
Identity = 59/159 (37.11%), Postives = 83/159 (52.20%), Query Frame = 0
Query:    6 ELKERLAALAAGITEAGCQRMSTDGQKELWRLVMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRK---KDTYRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            E+K  L +  A   + GC         EL+ L    YS  FR +L +DPP  M PL+V  +  A   R K R  S  + +++ +H+R+LE A  +YRNP + +AS  + +RK   KD +R+  D R VN+  E    PMP LE +   LA AT F  LD
Sbjct:  729 EVKAVLDSKVAEAVDYGCGDEFASRLSELFVL----YSDVFRLSLGKDPPVSMPPLKVHLKEGAKPIRCKSRRYSLPQRQFMQKHVRELEKAGFIYRNPASRWASAPLIVRKPHTKDEFRMTVDLRPVNAQTEQIVWPMPMLEVVIDHLAGATCFFLLD 883          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6A4YZG8_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZG8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.000e-15
Identity = 51/127 (40.16%), Postives = 72/127 (56.69%), Query Frame = 0
Query:   38 VMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRK---KDTYRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            +++ Y   FR +L  DPP  M PL+V   N A   R K R  S  + E++ +H+++LEAA  VYRNP + +AS  + +RK   KD +R+  D R +NS  E  A PMP LE +   L+ A  F  LD
Sbjct:  481 LLDKYVDVFRLSLGRDPPVKMPPLKVHLANGARPIRCKARRYSLPQREFMQQHVKELEAAGFVYRNPASRWASAPLIVRKPHTKDEFRMTVDLRPINSQTEQIAWPMPMLEVVVDHLSGAVCFFLLD 607          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6G0XGL8_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGL8_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 9.050e-15
Identity = 57/159 (35.85%), Postives = 86/159 (54.09%), Query Frame = 0
Query:    6 ELKERLAALAAGITEAGCQRMSTDGQKELWRLVMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRK---KDTYRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            E+K  L +  A   + GC     +    L  L++++ S  FR +L +DPP  M PL+V  ++ A   R K R  S  + +++ +H+R+LE A  +YRNP + +AS  + +RK   KD +R+  D R VN+  E    PMP LE +   LA AT F  LD
Sbjct:  145 EVKAVLDSKVAETVDYGC---GDEFASRLSELLVQN-SDVFRLSLGKDPPVSMPPLKVHLKDGAKPIRCKSRRYSLPQRQFMQKHVRELEEAGFIYRNPASRWASAPLIVRKPHTKDEFRMTVDLRPVNAQTEQIVWPMPMLEVVIDHLAGATCFFLLD 299          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6G0WUQ0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUQ0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 9.610e-15
Identity = 56/152 (36.84%), Postives = 82/152 (53.95%), Query Frame = 0
Query:   12 AALAAGITEAGCQRMSTDGQKELWRLVMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRKKD--TYRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            A L   I E+ C+ +S    + L R ++  +   FR  +  D P  +EPLRVR +  A   +   R   PA  E+L +H+R+LEAA +VYRN +A +AS    + KKD    R+  D R +N+  EP   PMPNL+    +L  + A+ TLD
Sbjct:  591 AVLEDKIQESKCEGLSAAFLERL-RKILTTHVDVFRLEIGHDKPIAVEPLRVRIKLGAIPVKCGLRRYPPAHVEFLKKHVRELEAAGLVYRNNRATWASAPRIVPKKDHNDLRMTIDSRPINACTEPMPWPMPNLDAALTVLVGSRAYFTLD 741          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6A4ZFF1_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4ZFF1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 1.690e-14
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 0
Query:   38 VMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRK---KDTYRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            +++ Y   FR +L  DPP  M PL+V   + A   R K R  S  + +++ +H+++LEAA  VYRNP + +AS  + +RK   KD +R+  D R +NS  E  A PMP LE +   L+ A  F  LD
Sbjct:  385 LLDKYVDVFRLSLGRDPPVKMPPLKVHLADGARPIRCKARRYSLPQRDFMQQHLKELEAAGFVYRNPASRWASAPLIVRKPHTKDEFRMTVDLRPINSQTEQIAWPMPMLEVVVDHLSGAACFFLLD 511          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6A4YZY1_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YZY1_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.220e-14
Identity = 49/127 (38.58%), Postives = 72/127 (56.69%), Query Frame = 0
Query:   38 VMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRK---KDTYRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            +++ Y   FR +L  DPP  M PL+V   + A   R K R  S  + +++ +H+++LEAA  VYRNP + +AS  + +RK   KD +R+  D R +NS  E  A PMP LE +   L+ A  F  LD
Sbjct:  199 LLDKYVDVFRLSLGRDPPVKMPPLKVHLADGARPIRCKARRYSLPQRDFMQQHVKELEAAGFVYRNPASRWASAPLIVRKPHTKDEFRMTVDLRPINSQTEQIAWPMPMLEVVVDHLSGAACFFLLD 325          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6A4ZAT1_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZAT1_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 3.070e-14
Identity = 53/146 (36.30%), Postives = 78/146 (53.42%), Query Frame = 0
Query:   18 ITEAGCQRMSTDGQKELWRLVMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRKK--DTYRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            I EA    +S   + EL R +++D++  FR    +D P D+EPL+VR +  A   +   R   PA  E+L +H+ +LEAA +VYRN +A +A+    + KK    YR+  D R +N+   P   PMPNL+     L     F TLD
Sbjct:   19 IAEAIQLGLSPAHESEL-RRILDDHADVFRLEFGQDLPVDVEPLKVRLKEGAVPVKCALRRYPPAHMEYLKQHVEELEAAGLVYRNNRATWAAAPRIVAKKAPGEYRMTIDSRPINAWTIPMPWPMPNLDAAMATLVGMNVFFTLD 163          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6A4YZ10_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZ10_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.080e-13
Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 0
Query:   38 VMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRK---KDTYRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            +++ Y   FR +L  DPP  M  L+V   N A   R K R  S  + E++  H+++LEAA  VYRNP + +AS  + +RK   KD +R+  D R +NS  E  A PMP LE +   L+ A  F  LD
Sbjct:  689 LLDKYVDVFRLSLGRDPPVKMPLLKVHFANGARLIRCKARRYSLPQREFMQHHVKELEAAGFVYRNPASRWASAPLIVRKPHTKDEFRMTVDLRPINSQTEQIAWPMPMLEVVVDHLSGAVCFFLLD 815          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6G0WYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYM7_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 3.830e-13
Identity = 53/158 (33.54%), Postives = 78/158 (49.37%), Query Frame = 0
Query:    6 ELKERLAALAAGITEAGCQRMSTDGQKELWRLVMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRKKDT--YRVVADFRAVNSLVEPAAMPMPNLEELGRLLAAATAFCTLD 160
            E++E L    A   E G       GQ +  R ++  Y   FR    +DPP  + PL+VR +  A   +   R   PA  ++L +H+ +LEAA ++YRN +A +A+    + KK+   YR+  D R +N+  E    PMPNLE     L     F TLD
Sbjct:   39 EVQEVLEQKVAEAVEQGLP----PGQVDELRRILRAYQDVFRLDFGKDPPVKVAPLKVRLKEGAVPVKVGLRRYPPAHMDYLRQHVAELEAAGLIYRNNRATWAAAPRIVPKKNPGEYRMTIDSRPINAWTEAMPWPMPNLEAAMATLVGMEVFFTLD 192          
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Match: A0A6A4YTM1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4YTM1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.330e-13
Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = 0
Query:   38 VMEDYSGAFRRALIEDPPADMEPLRVR-RNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVYRNPQAAFASVAMAIRK---KDTYRVVADFRAVNSLVEPAAMPMPNLE 144
            +++ Y   FR +L  DPP  M PL+V   + A   R K R  S  + +++ +H+++LEAA  VYRNP + +AS  + +RK   KD +R+  D R +NS  E  A PMP LE
Sbjct:  385 LLDKYVDVFRLSLGRDPPVKMPPLKVHLADGARPIRCKARRYSLHQRDFMQQHVKELEAAGFVYRNPASRWASAPLIVRKPHTKDEFRMTVDLRPINSQTEQIAWPMPMLE 495          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig95949.17612.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0W3Y6_9STRA4.200e-1637.11Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6A4YZG8_9STRA2.000e-1540.16Reverse transcriptase domain-containing protein n=... [more]
A0A6G0XGL8_9STRA9.050e-1535.85Reverse transcriptase domain-containing protein n=... [more]
A0A6G0WUQ0_9STRA9.610e-1536.84Uncharacterized protein n=3 Tax=Aphanomyces euteic... [more]
A0A6A4ZFF1_9STRA1.690e-1438.58Reverse transcriptase domain-containing protein (F... [more]
A0A6A4YZY1_9STRA2.220e-1438.58Reverse transcriptase domain-containing protein (F... [more]
A0A6A4ZAT1_9STRA3.070e-1436.30Integrase catalytic domain-containing protein (Fra... [more]
A0A6A4YZ10_9STRA1.080e-1339.37Reverse transcriptase domain-containing protein (F... [more]
A0A6G0WYM7_9STRA3.830e-1333.54Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A6A4YTM1_9STRA8.330e-1339.64Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.10.10coord: 68..137
e-value: 1.3E-12
score: 49.5
NoneNo IPR availableGENE3D3.30.70.270coord: 138..160
e-value: 1.3E-12
score: 49.5
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 44..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig95949contigS-dermatodea_contig95949:2..481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig95949.17612.1mRNA_S-dermatodea_contig95949.17612.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig95949 2..481 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig95949.17612.1 ID=prot_S-dermatodea_contig95949.17612.1|Name=mRNA_S-dermatodea_contig95949.17612.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=160bp
MPPEVELKERLAALAAGITEAGCQRMSTDGQKELWRLVMEDYSGAFRRAL
IEDPPADMEPLRVRRNAATHARAKPRPMSPAKAEWLAEHMRQLEAARMVY
RNPQAAFASVAMAIRKKDTYRVVADFRAVNSLVEPAAMPMPNLEELGRLL
AAATAFCTLD
back to top