prot_S-dermatodea_contig9566.17587.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9566.17587.1
Unique Nameprot_S-dermatodea_contig9566.17587.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length248
Homology
BLAST of mRNA_S-dermatodea_contig9566.17587.1 vs. uniprot
Match: D7FH10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH10_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 2.930e-89
Identity = 140/247 (56.68%), Postives = 172/247 (69.64%), Query Frame = 0
Query:    1 MDSLRLVRSGAVNQGVLTSGSLTADGRSRVDAFVNRWHCRRVARRSETILSVALAHMGGSVRLRILGGFLHRWRVT--PPPRRLLRPKLFLLLDIRRRDILHNAYSAWALLALQRQFEQRVARRRGRRIVLLFFRREGRMKAIGMGRWRDAVRAMRDLEYRRTACFDRWKLFVLLCRHDSTWGVERAMGILHRAWFQRLVFNRLADWRIKRMAARRIREALAAPLLRGAWVSWGAFARLRRRQIIQR 245
            M SLRL R+GA+NQGV  SGSL+ DG +RVDAFV+RWHCRR A RS  IL+  L H+  SVR R+L G+L RWR    P PR LLRPK FLL+D RRRD LH A +AW LL  Q   E+ +ARR+G R+     RRE +++A G  RW DA    RD E RR  CF+RWK+FVLLC+H+S+WGVERAM +LHRAW Q L F+RL  WR +R+AAR +R+A +A LLRGAWV+W     L  R  + R
Sbjct:    1 MASLRLARAGAINQGVFVSGSLSNDGHARVDAFVDRWHCRRSAERSGLILAAVLEHLAWSVRTRLLAGYLDRWRSNRAPLPRTLLRPKTFLLVDTRRRDNLHKALTAWGLLTRQLYAERALARRKGARVARQLGRREAKLRAAGFSRWIDATLERRDEERRRVGCFERWKIFVLLCQHNSSWGVERAMRVLHRAWLQHLAFHRLLAWRAERVAARALRDAFSATLLRGAWVAWRFTVALDNRDRMAR 247          
BLAST of mRNA_S-dermatodea_contig9566.17587.1 vs. uniprot
Match: A0A6H5K0P9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0P9_9PHAE)

HSP 1 Score: 272 bits (695), Expect = 1.470e-88
Identity = 139/250 (55.60%), Postives = 174/250 (69.60%), Query Frame = 0
Query:    1 MDSLRLVRSGAVNQGVLTSGSLTADGRSRVDAFVNRWHCRRVARRSETILSVALAHMGGSVRLRILGGFLHRWRVT--PPPRRLLRPKLFLLLDIRRRDILHNAYSAWALLALQRQFEQRVARRRGRRIVLLFFRREGRMKAIGMGRWRDAVRAMRDLEYRRTACFDRWKLFVLLCRHDSTWGVERAMGILHRAWFQRLVFNRLADWRIKRMAARRIREALAAPLLRGAWVSWGA-FARLRRRQIIQRTW 247
            M SLRL R+GA+NQGV  SGSLT DG +RVDAFV+RWHCRR A RS  IL+  L H+  SVR R+L G+L RWR T  P PR LLRPK FLLLD+RRRD LH A +AW LL  Q   ++ + RR+G R+     R + +++A G  RW +A RA RD E RR  CF+RWKLFVLLC+H+S+WGVERAM +L RAW Q L F+RL+ W  +R+AAR +R+ L   LLRGAWV+W    AR  R  + ++ W
Sbjct:    1 MASLRLARAGAINQGVFLSGSLTNDGHARVDAFVDRWHCRRSAERSGLILAAVLEHLARSVRTRLLAGYLDRWRRTRAPLPRTLLRPKTFLLLDMRRRDNLHKALTAWGLLTRQLHADRALTRRKGARVARQLRRGDAKLRAAGFSRWIEATRARRDEESRRVGCFERWKLFVLLCQHNSSWGVERAMRVLRRAWLQHLAFHRLSAWHAERVAARALRDVLTTTLLRGAWVAWRCTVARDNRSMMARQAW 250          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9566.17587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH10_ECTSI2.930e-8956.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0P9_9PHAE1.470e-8855.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9566contigS-dermatodea_contig9566:1322..3378 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9566.17587.1mRNA_S-dermatodea_contig9566.17587.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9566 1322..3378 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9566.17587.1 ID=prot_S-dermatodea_contig9566.17587.1|Name=mRNA_S-dermatodea_contig9566.17587.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=248bp
MDSLRLVRSGAVNQGVLTSGSLTADGRSRVDAFVNRWHCRRVARRSETIL
SVALAHMGGSVRLRILGGFLHRWRVTPPPRRLLRPKLFLLLDIRRRDILH
NAYSAWALLALQRQFEQRVARRRGRRIVLLFFRREGRMKAIGMGRWRDAV
RAMRDLEYRRTACFDRWKLFVLLCRHDSTWGVERAMGILHRAWFQRLVFN
RLADWRIKRMAARRIREALAAPLLRGAWVSWGAFARLRRRQIIQRTW*
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