prot_S-dermatodea_contig9560.17584.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9560.17584.1
Unique Nameprot_S-dermatodea_contig9560.17584.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length120
Homology
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: D8LI19_ECTSI (Circadian RNA-binding protein CHLAMY 1 subunit C1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI19_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.400e-19
Identity = 57/129 (44.19%), Postives = 69/129 (53.49%), Query Frame = 0
Query:    1 MNLLPNFLEQEFDVNAIALMQDKDFEEIQVPKGPQLKIQRACREAGLGAAEAAEK---------------------------------KDETEAAASSSKNSCVICFEGQIEVTFLGCGHQICCKKCGD 96
            M+LLPNFLEQEFDVNAI LM+++DF+EI++P GPQ KIQ+A REA      AA                                   +DE  AA     + C IC E  IEVTF+GCGH ICC  CG+
Sbjct:  416 MHLLPNFLEQEFDVNAIVLMEEQDFDEIKIPFGPQKKIQKAIREATANMERAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEDEPRAA-----DLCAICMENPIEVTFVGCGHFICCVTCGN 539          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: UPI001B88ADB0 (E3 ubiquitin-protein ligase XIAP-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88ADB0)

HSP 1 Score: 56.6 bits (135), Expect = 6.750e-7
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0
Query:   70 CVICFEGQIEVTFLGCGHQICCKKCGDTLVGKLCPYCREKVTQAVKFY 117
            C +C E QI+VTF+ CGH +CC +CG  LV + CP CR  ++  VK Y
Sbjct:  375 CKVCMENQIQVTFVPCGHLVCCGQCG--LVMEQCPICRTSISGMVKTY 420          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: UPI0004F0C6AC (RNA-binding E3 ubiquitin-protein ligase MEX3C n=1 Tax=Acanthisitta chloris TaxID=57068 RepID=UPI0004F0C6AC)

HSP 1 Score: 55.8 bits (133), Expect = 1.250e-6
Identity = 23/55 (41.82%), Postives = 35/55 (63.64%), Query Frame = 0
Query:   67 KNSCVICFEGQIEVTFLGCGHQICCKKCGDTLVGK---LCPYCREKVTQAVKFYS 118
            K+ CVICFE ++ V  + CGH + C +C + +  K   LCP C+  VTQA++ +S
Sbjct:  353 KHDCVICFESEVTVALVPCGHNLFCLQCANKICEKETALCPVCQAAVTQAIQIHS 407          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: A0A812C804_SEPPH (BIRC2_3 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812C804_SEPPH)

HSP 1 Score: 54.7 bits (130), Expect = 3.420e-6
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 0
Query:   68 NSCVICFEGQIEVTFLGCGHQICCKKCGDTLVGKLCPYCREKVTQAVKFYSG 119
            N C IC +  I VTF+ CGH +CC  CG ++  + CP CR  + ++ + Y G
Sbjct:  672 NQCKICMDNDINVTFIPCGHLVCCSDCGKSV--RHCPLCRTPIERSFRVYLG 721          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: A0A6P7TEA1_OCTVU (cell wall integrity transcriptional regulator CAS5-like isoform X1 n=2 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7TEA1_OCTVU)

HSP 1 Score: 54.7 bits (130), Expect = 3.550e-6
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 0
Query:   68 NSCVICFEGQIEVTFLGCGHQICCKKCGDTLVGKLCPYCREKVTQAVKFYSG 119
            N C IC +  I VTF+ CGH +CC  CG ++  + CP CR  + ++ + Y G
Sbjct: 1141 NQCKICMDNDINVTFIPCGHLVCCSDCGKSV--RHCPLCRTPIERSFRVYLG 1190          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: A0A132A649_SARSC (Baculoviral IAP repeat-containing protein 3-like protein n=2 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A132A649_SARSC)

HSP 1 Score: 53.5 bits (127), Expect = 8.220e-6
Identity = 21/49 (42.86%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   69 SCVICFEGQIEVTFLGCGHQICCKKCGDTLVGKLCPYCREKVTQAVKFY 117
            +C IC+E QI+V F+ CGHQ+ C KC   +   +CP CR ++T  ++ Y
Sbjct:  416 TCSICYERQIQVVFIPCGHQLACLKCAMQI--DVCPVCRNRITSKLRTY 462          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: UPI001E1DA735 (baculoviral IAP repeat-containing protein 3-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DA735)

HSP 1 Score: 52.8 bits (125), Expect = 1.600e-5
Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 0
Query:   69 SCVICFEGQIEVTFLGCGHQICCKKCGDTLVGKLCPYCREKVTQAVKFY 117
            SC IC E  + +TFL CGH +CC++C   +  K CP CREK+   VK +
Sbjct:  615 SCKICMEKTMCITFLPCGHLLCCERCAVQV--KRCPTCREKIAGTVKTF 661          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: A0A6J3M4Z5_9PEZI (uncharacterized protein n=1 Tax=Dissoconium aciculare CBS 342.82 TaxID=1314786 RepID=A0A6J3M4Z5_9PEZI)

HSP 1 Score: 52.8 bits (125), Expect = 1.670e-5
Identity = 20/49 (40.82%), Postives = 30/49 (61.22%), Query Frame = 0
Query:   70 CVICFEGQIEVTFLGCGHQICCKKCGDTLVGKLCPYCREKVTQAVKFYS 118
            C +C+EG +EV FLGCGH + C+ C + +    CP CR +V   V+ + 
Sbjct: 1100 CRVCYEGALEVAFLGCGHVVACEACAERVAD--CPVCRRRVDGRVRLWG 1146          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: UPI001B88ABF4 (baculoviral IAP repeat-containing protein 7-A-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88ABF4)

HSP 1 Score: 50.8 bits (120), Expect = 6.860e-5
Identity = 18/48 (37.50%), Postives = 31/48 (64.58%), Query Frame = 0
Query:   70 CVICFEGQIEVTFLGCGHQICCKKCGDTLVGKLCPYCREKVTQAVKFY 117
            C IC E +I +TF+ CGH +CC+ C   +  + CP CR ++++ V+ +
Sbjct:  315 CKICMEERIRMTFMPCGHLVCCENCASVM--EECPICRSRISETVRTF 360          
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Match: UPI0008F9C8BE (E3 ubiquitin-protein ligase LRSAM1-like isoform X1 n=2 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9C8BE)

HSP 1 Score: 50.8 bits (120), Expect = 7.580e-5
Identity = 21/50 (42.00%), Postives = 29/50 (58.00%), Query Frame = 0
Query:   68 NSCVICFEGQIEVTFLGCGHQICCKKCGDTLVGKLCPYCREKVTQAVKFY 117
            N C+ICFE +I V F+ CGH  CC  C  T+    CP CR  + + +K +
Sbjct:  655 NECIICFEREISVVFMECGHCCCCDTC--TVPLNCCPLCRAAIHRKIKLH 702          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9560.17584.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LI19_ECTSI1.400e-1944.19Circadian RNA-binding protein CHLAMY 1 subunit C1 ... [more]
UPI001B88ADB06.750e-750.00E3 ubiquitin-protein ligase XIAP-like n=1 Tax=Giga... [more]
UPI0004F0C6AC1.250e-641.82RNA-binding E3 ubiquitin-protein ligase MEX3C n=1 ... [more]
A0A812C804_SEPPH3.420e-640.38BIRC2_3 n=1 Tax=Sepia pharaonis TaxID=158019 RepID... [more]
A0A6P7TEA1_OCTVU3.550e-640.38cell wall integrity transcriptional regulator CAS5... [more]
A0A132A649_SARSC8.220e-642.86Baculoviral IAP repeat-containing protein 3-like p... [more]
UPI001E1DA7351.600e-546.94baculoviral IAP repeat-containing protein 3-like n... [more]
A0A6J3M4Z5_9PEZI1.670e-540.82uncharacterized protein n=1 Tax=Dissoconium acicul... [more]
UPI001B88ABF46.860e-537.50baculoviral IAP repeat-containing protein 7-A-like... [more]
UPI0008F9C8BE7.580e-542.00E3 ubiquitin-protein ligase LRSAM1-like isoform X1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 55..118
e-value: 4.3E-16
score: 60.0
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 2..54
e-value: 3.9E-9
score: 38.1
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 67..112
e-value: 4.0E-12
score: 45.8
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 58..117
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 69..113
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 70..107
score: 9.819

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9560contigS-dermatodea_contig9560:2606..4239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9560.17584.1mRNA_S-dermatodea_contig9560.17584.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9560 2177..4368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9560.17584.1 ID=prot_S-dermatodea_contig9560.17584.1|Name=mRNA_S-dermatodea_contig9560.17584.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=120bp
MNLLPNFLEQEFDVNAIALMQDKDFEEIQVPKGPQLKIQRACREAGLGAA
EAAEKKDETEAAASSSKNSCVICFEGQIEVTFLGCGHQICCKKCGDTLVG
KLCPYCREKVTQAVKFYSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR013761SAM/pointed_sf
IPR001841Znf_RING