prot_S-dermatodea_contig955.17570.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig955.17570.1
Unique Nameprot_S-dermatodea_contig955.17570.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length567
Homology
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BLAST of mRNA_S-dermatodea_contig955.17570.1 vs. uniprot
Match: D7FHW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW6_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 1.130e-54
Identity = 161/403 (39.95%), Postives = 224/403 (55.58%), Query Frame = 0 
Query:  121 MEDRVKLEVQTAVRRDVNKRVSLAERATESLRKRVDELAEDISSVGGTVRQVSASTQSQRDATEQLVADETRNRSSLDVLEKWRVGRDTWCSRTDDTLASLAEGAQVLTRRTHTQQKVLKEGVVSQDDLAAELKKAREAATAATASALAPVREHFLEEMAIFRRRLLAVEESAQMSV---VPEVTRTHVKSVAEEAASAKGEELWRKVETHVRDKLAKEARETLAAAAAAVKGLERRFVEVEERVDSCGSTLA---KLEGGESSSAELLRLRESISALQQRLGDGLARMEE--LNQRAPRDGNHGRKISKAYTCEEHIYSVTNVCPRRQRPRLVLLPAHQTCGANKLEEVEQLRTRPSFADAAPVAVASP-----EKVKKCSEMVEELVSGAVVAAKRQATAE 510
            MEDR+KLEVQT VRRDV++RVSLAERA E++R+RVD LAE+++S+G  VR+ SA+T +   A EQL A + R RS++ +LE WR  R+ WC+RT ++L SL E ++ L+RR HTQQK L E  V+Q+DLA  +K  R    AA+ASA+AP+REHFL+E+   RRRL A+E  AQ +    V  V  T VKS+A E ASAK EE                                     VE RV + G  L    K EG  S  A  L +R+++ ALQ+RL + LAR+++   + R+  D N  +    A         VT         R  L P      A +L+E+E+L  R +  D  P  V +P     EKV+  ++ V+E+  GA  A++++A  E
Sbjct:    1 MEDRIKLEVQTVVRRDVDQRVSLAERAAEAVRQRVDGLAEEVASLGEIVRRSSATTTAHATALEQLQASQQRTRSTVTLLETWRADREGWCARTSESLHSLTEDSRALSRRAHTQQKALGEVEVAQEDLAVLVKSTRRVGEAASASAMAPIREHFLQEIETIRRRLSALENEAQTTATAAVSGVDPTMVKSIAVEEASAKAEE-------------------------------------VERRVSAYGPALETHKKAEGDISRGA--LGVRDTMEALQKRLAENLARIDDELCDLRSRHDRNAAKTAETAALSAIEQQQVTQSVSDGLDGRQDLKPL-----AKRLDELERLWERKTPTDLTPATVTAPSSAAVEKVEGIAKTVQEMALGAEAASRQRAIFE 359
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig955.17570.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHW6_ECTSI1.130e-5439.95Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..161
NoneNo IPR availableCOILSCoilCoilcoord: 499..519
NoneNo IPR availableCOILSCoilCoilcoord: 334..361
NoneNo IPR availableCOILSCoilCoilcoord: 389..409

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig955contigS-dermatodea_contig955:425..6101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig955.17570.1mRNA_S-dermatodea_contig955.17570.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig955 310..6101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig955.17570.1 ID=prot_S-dermatodea_contig955.17570.1|Name=mRNA_S-dermatodea_contig955.17570.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=567bp
MCGSLSVTMGSEWEANIARLIDRANETLAGSTAQQQQSAGASFPYRGESA
TQRPGPTNFRGDRGASYRRGSGGWDASLLAKNSQAWSKPSDGSVSRSPPI
PTASYSRVAEARVHDARLDGMEDRVKLEVQTAVRRDVNKRVSLAERATES
LRKRVDELAEDISSVGGTVRQVSASTQSQRDATEQLVADETRNRSSLDVL
EKWRVGRDTWCSRTDDTLASLAEGAQVLTRRTHTQQKVLKEGVVSQDDLA
AELKKAREAATAATASALAPVREHFLEEMAIFRRRLLAVEESAQMSVVPE
VTRTHVKSVAEEAASAKGEELWRKVETHVRDKLAKEARETLAAAAAAVKG
LERRFVEVEERVDSCGSTLAKLEGGESSSAELLRLRESISALQQRLGDGL
ARMEELNQRAPRDGNHGRKISKAYTCEEHIYSVTNVCPRRQRPRLVLLPA
HQTCGANKLEEVEQLRTRPSFADAAPVAVASPEKVKKCSEMVEELVSGAV
VAAKRQATAEERLEELTEQMCGHSLKLRCLEGLWREAESTDRGKRVGEGA
GKSGGGDGMAGTCVSK*
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