prot_S-dermatodea_contig9510.17540.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9510.17540.1
Unique Nameprot_S-dermatodea_contig9510.17540.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length142
Homology
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BLAST of mRNA_S-dermatodea_contig9510.17540.1 vs. uniprot
Match: D8LRX6_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX6_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 6.710e-13
Identity = 33/40 (82.50%), Postives = 38/40 (95.00%), Query Frame = 0 
Query:   35 GLQLIDLHSAAKQDDIMAVIRLLKEGANVDKRDPYGYTPL 74
            GLQ +DLHSAAKQDDIMAV++LL+EGA +DKRDPYGYTPL
Sbjct:    5 GLQFVDLHSAAKQDDIMAVVKLLEEGAPIDKRDPYGYTPL 44
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BLAST of mRNA_S-dermatodea_contig9510.17540.1 vs. uniprot
Match: A0A7S4KW95_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KW95_9EUKA)

HSP 1 Score: 54.3 bits (129), Expect = 5.470e-6
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 0 
Query:   39 IDLHSAAKQDDIMAVIRLLKEG-ANVDKRDPYGYTPLHWACQKG 81
            +DLH AA++ D++ + +LL      VDKRDPYG TPLHWACQ G
Sbjct:    3 LDLHKAAQKGDLLLMDQLLSSRKVVVDKRDPYGGTPLHWACQAG 46
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9510.17540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LRX6_ECTSI6.710e-1382.50Chain A, Crystal Structure Of A Designed Full Cons... [more]
A0A7S4KW95_9EUKA5.470e-656.82Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 118..132
score: 38.91
coord: 70..85
score: 40.56
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 69..98
e-value: 1.5E-7
score: 41.1
coord: 102..131
e-value: 4.1E-5
score: 33.0
coord: 36..65
e-value: 290.0
score: 9.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 102..134
score: 11.995
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 41..68
score: 8.656
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 69..101
score: 14.719
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 41..132
e-value: 1.4E-20
score: 73.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 41..134
score: 32.36
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 37..135
e-value: 2.7E-34
score: 120.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 41..132
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 40..132
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 40..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9510contigS-dermatodea_contig9510:1666..7421 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9510.17540.1mRNA_S-dermatodea_contig9510.17540.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9510 1666..7421 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9510.17540.1 ID=prot_S-dermatodea_contig9510.17540.1|Name=mRNA_S-dermatodea_contig9510.17540.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=142bp
RGPGLCLCSHRSPFILPKMAVAAFGGVNTIAGDGGLQLIDLHSAAKQDDI
MAVIRLLKEGANVDKRDPYGYTPLHWACQKGHTHTVQALLAAGANVHVRD
KWRRTPLHRAAKEGHKETVSALLDSGAEINAQVGLSFQIFR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf