prot_S-dermatodea_contig9509.17539.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9509.17539.1
Unique Nameprot_S-dermatodea_contig9509.17539.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length139
Homology
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BLAST of mRNA_S-dermatodea_contig9509.17539.1 vs. uniprot
Match: A0A6H5KJ39_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ39_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 3.920e-10
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    1 GGICALGRFDDGRNEYYRLNACTTADETPVGP-VGPTPAPTVAPPTATREP--MGPPIDYRGDGDDEDLRE 68
            GG+CALG F+DG  EYYR+ ACTT +ET   P +GPT            +      P+DYRGDGDDEDLR+
Sbjct:  252 GGMCALGHFEDGHEEYYRVKACTTEEETEKNPDIGPTXXXXXXXXXXXXDSHNAAAPVDYRGDGDDEDLRD 322
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9509.17539.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJ39_9PHAE3.920e-1050.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9509contigS-dermatodea_contig9509:1770..5356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9509.17539.1mRNA_S-dermatodea_contig9509.17539.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9509 1770..5356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9509.17539.1 ID=prot_S-dermatodea_contig9509.17539.1|Name=mRNA_S-dermatodea_contig9509.17539.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=139bp
GGICALGRFDDGRNEYYRLNACTTADETPVGPVGPTPAPTVAPPTATREP
MGPPIDYRGDGDDEDLREGGYGSSSWTHPGTDGRTGGGGRDHSDDDSGAN
DSDDDSGDGHSKDDDSGDDTRDQQDTNDPSDDNSGRSSD
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