prot_S-dermatodea_contig9449.17478.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9449.17478.1
Unique Name	prot_S-dermatodea_contig9449.17478.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	287

Homology

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: D8LDW6_ECTSI (Cupin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDW6_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 2.160e-88
Identity = 137/214 (64.02%), Postives = 166/214 (77.57%), Query Frame = 0

Query:    1 MKTS-CYAAAALVVAGLGACTAEHSVATT----------QDFVFNLGGPEPENPVGGVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEGD-ITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFDLHSKAIQASLNFEDPQLKALISALPQTPAMARHECLQRCGL 202
            MKTS C AA  +V AG  + TA+ S   T          +DFVF LGGPEP+ PV G ++RAA LG +PAL+G+ I+M LVNLDACTINLP +HPRATEM YVI G+ +  AFV+EN GEGAV+N+L++GDV FFPQGL+HY+QNLGC P TFLAALNN+DPGAVT+TTRFF+L S+AIQASLNFEDP L+ LI +LP  PA AR +CL+RCGL
Sbjct:    1 MKTSFCSAAGLVVAAGFMSSTAQASGVVTAQQQITMFNPEDFVFTLGGPEPDAPVDGFQIRAATLGQIPALDGQGIAMALVNLDACTINLPHIHPRATEMQYVINGEHLRVAFVEENGGEGAVVNDLSQGDVTFFPQGLIHYEQNLGCEPVTFLAALNNDDPGAVTITTRFFELPSEAIQASLNFEDPALQRLIESLPDAPAAARRQCLERCGL 214

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: A0A6H5JV79_9PHAE (Cupin type-1 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JV79_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 5.150e-81
Identity = 131/211 (62.09%), Postives = 159/211 (75.36%), Query Frame = 0

Query:    1 MKTS-CYAAAALVVAGLGACTAEHSVATTQ---------DFVFNLGGPEPENPVGGVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEGD-ITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFDLHSKAIQASLNFEDPQLKALISALPQTPAMARHECLQRC 200
            MKTS C AA  ++ AGL +      V T Q         DFVF+LGGPEP+  V G +LR A +  LPAL+G+ ISM LVNLD C INLP +HPRATEM+YVI+G+ +  AFV+EN GEGAV+N+L +GDVAFFPQGL+HYQQNL C PATFLAALNNEDPGA+T+TTRFF+L  +AIQAS+NFE+P L+ LI +LP  PA AR +CLQRC
Sbjct:    1 MKTSFCAAAGFVIAAGLMSAVQVCGVVTVQQQITLYNPEDFVFSLGGPEPDALVDGFQLRTAVVNQLPALDGQGISMGLVNLDPCAINLPHIHPRATEMVYVIKGEQLRVAFVEENGGEGAVVNDLAQGDVAFFPQGLIHYQQNLDCEPATFLAALNNEDPGAITITTRFFELPLEAIQASVNFEEPVLQNLIESLPDAPAAARQQCLQRC 211

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: A0A507FDZ0_9FUNG (Cupin type-1 domain-containing protein n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FDZ0_9FUNG)

HSP 1 Score: 161 bits (407), Expect = 8.120e-45
Identity = 81/175 (46.29%), Postives = 112/175 (64.00%), Query Frame = 0

Query:   29 QDFVFNLGGPEPENPVG-GVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEGDITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFDLHSKAIQASLNFE-DPQLKALISALPQTPAMARHECLQRCG 201
            +DF+ +L        VG G  L   NLG++PAL  + ++M L+NL+ C  NLP VHPRA+E +YVI+G++   F++EN G   ++N+L +G   F PQG +HYQ NLGC  A  +AA NNEDPG +T+  +FF L   AI ASL    DP+++AL  +LP  PA    ECL+RCG
Sbjct:   48 EDFITDLLHNPKSTEVGKGGSLAKMNLGSMPALARQGLAMVLINLNPCGANLPHVHPRASEAIYVIQGNVQVGFIEEN-GAKVIVNDLVQGQATFIPQGSIHYQVNLGCEQAVMIAANNNEDPGTLTIPAQFFKLPDGAIAASLGGTLDPEIRALNGSLPMNPAPGVEECLRRCG 221

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: A0A836CNU2_9STRA (RmlC-like cupin domain-containing protein n=7 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNU2_9STRA)

HSP 1 Score: 143 bits (361), Expect = 4.910e-38
Identity = 77/182 (42.31%), Postives = 105/182 (57.69%), Query Frame = 0

Query:   30 DFVFNLGGPEPENPVGGVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEG---DITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFF------DLHSKAIQASLNFEDPQLKALISALPQTPAMARHECLQRCGL 202
            DF F+L G +     GG   +  +   LP+L GE+++M  + L+ C INLP VHPRATE+LYV++     + +AFV+EN G   + N +  G+ AFFPQGL H Q N+GC PAT +AAL ++D G  T+TT         D   + + A+L     QL  LI   P  PA+   EC QRCGL
Sbjct:   60 DFKFDLDGSKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCTPATMIAALGSDDFGVQTITTTALKGLAGADGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 240

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: A0A835YZF9_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF9_9STRA)

HSP 1 Score: 141 bits (355), Expect = 8.950e-38
Identity = 77/182 (42.31%), Postives = 105/182 (57.69%), Query Frame = 0

Query:   30 DFVFNLGGPEPENPVGGVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEG---DITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFDLHSKA------IQASLNFEDPQLKALISALPQTPAMARHECLQRCGL 202
            DF F+L G       GG   +  +   LP+L GE+++M  + L+ C INLP VHPRATE+LYV++     + +AFV+EN G   + N +  G+ AFFPQGL H Q N+GC PAT +AAL ++D G  T+TT   +  + A      + A+L     QL  LI   P  PA+   EC QRCGL
Sbjct:    9 DFKFDLAGSTATAGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLEPCGINLPHVHPRATEILYVVDAAAEGVLTAFVEENGGR-TIENTVVAGEAAFFPQGLTHMQVNMGCTPATMIAALGSDDFGVQTITTTALEGLAGAEGLGEGLAAALGISQDQLAVLIGGFPDGPAIGAAECRQRCGL 189

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: UPI0020087ADD (RmlC-like cupin domain-containing protein n=1 Tax=Epithele typhae TaxID=378194 RepID=UPI0020087ADD)

HSP 1 Score: 143 bits (360), Expect = 9.500e-38
Identity = 77/175 (44.00%), Postives = 99/175 (56.57%), Query Frame = 0

Query:   30 DFVFNLGGPEPENPVGGVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEGDITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFDLHSKAIQASLNFEDPQLKALI-SALPQTPAMARHECLQRCGLQ 203
            DFVFN     P    GG  L A N+   PAL G  ++MTL  L+ C +N P  HPRATEMLYV+ G +T+  + EN G   V N++  G    F QG +HYQQN  C P  F+AALNNEDPG  ++  R+F L    + ASL     +    I S +P   A+ R ECL RCG++
Sbjct:   45 DFVFNFFNTTPAKSAGGTALNA-NVANFPALVGNGLAMTLGFLEPCGMNTPHTHPRATEMLYVVNGTLTTGMIAEN-GARFVFNKINTGSAQVFLQGSIHYQQNELCDPVMFVAALNNEDPGVESIAQRYFGLPPDVVAASLGDLGVENVVWIESQIPDNFALGRQECLDRCGIK 217

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: A0A0G4EA80_VITBC (Cupin type-1 domain-containing protein n=2 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EA80_VITBC)

HSP 1 Score: 140 bits (354), Expect = 1.060e-36
Identity = 70/177 (39.55%), Postives = 109/177 (61.58%), Query Frame = 0

Query:   28 TQDFVFNLGGPEPENPVGGVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEG-DITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFDLHSKAIQASLNFEDPQLKALISALPQTPAMARHECLQRCGLQ 203
            +  FVF+L    P +   G ELR A++G++P+L G  +S  L  L  C +N  ++HPRA+E+ YVI   ++   FV+EN G   V N L  G ++F P+GL+H+  N GC  A FL+  N+EDPG VT+    FD+++ ++QA+LN +   +  L +++P +P     ECL+RCGL+
Sbjct:   44 SSQFVFDLARMSPVDAGKGGELRKADVGSMPSLAGNGVSQVLYRLYPCGMNSVQMHPRASELFYVINATELVVGFVEENGGR-TVENTLKTGQLSFVPKGLMHWHYNAGCEDAVFLSTFNHEDPGVVTIVNALFDINATSLQAALNVDRALVADLKTSVPPSPVPGIAECLRRCGLE 219

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: A0A0G4FMH1_VITBC (Cupin type-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FMH1_VITBC)

HSP 1 Score: 140 bits (352), Expect = 1.980e-36
Identity = 69/175 (39.43%), Postives = 105/175 (60.00%), Query Frame = 0

Query:   28 TQDFVFNLGGPEPENPVGGVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEG-DITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFDLHSKAIQASLNFEDPQLKALISALPQTPAMARHECLQRCG 201
            T+DFVFNL   +  +   G ELR A +  +P+L G  +S  L  L  C +N  ++HPRATE+ YVI   ++   FV+EN G   + N L  G ++F P+GL+H+  N GC  A FL+  N+EDPG +T+    FD++S ++QA+ N +  Q+  + S++P +P     ECL +CG
Sbjct:   43 TEDFVFNLAAAKAGDAGKGGELRVAAVAAMPSLAGNGVSQALYRLYPCGMNSVQMHPRATELFYVINATELHVGFVEENGGR-TIENVLKTGQLSFVPKGLLHWHYNAGCEDAIFLSTFNHEDPGVLTIVNALFDINSTSLQAAFNVDADQIADIKSSIPASPVPGIAECLAKCG 216

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: A0A835Z488_9STRA (RmlC-like cupin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z488_9STRA)

HSP 1 Score: 139 bits (350), Expect = 2.110e-36
Identity = 75/183 (40.98%), Postives = 104/183 (56.83%), Query Frame = 0

Query:   29 QDFVFNLGGPEPENPVGGVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEGD---ITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFDLHSKA------IQASLNFEDPQLKALISALPQTPAMARHECLQRCGL 202
            +DF FN+   +     GG   +  +   LP+L GE+++M  + L  C INLP VHPRATE+LYVI+     + +AFV+EN G   + N +  G+ AFFPQGL H Q N+GC PAT +AAL ++D G  T+T+      + A      + A+L     QL  L+   P  PA+   EC QRCGL
Sbjct:   60 EDFTFNIDASKATTGNGGGSAQTLSAAQLPSLTGEKVAMVKLVLQPCGINLPHVHPRATEILYVIDAPAEGVLTAFVEENGGR-TIENTIVTGEAAFFPQGLTHVQVNMGCAPATMIAALGSDDFGVQTITSAALKGLAAAEGLGEGLAAALGIAQDQLALLVGGFPDGPAIGAAECRQRCGL 241

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BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Match: A0A433DF28_9FUNG (RmlC-like cupin n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433DF28_9FUNG)

HSP 1 Score: 137 bits (345), Expect = 9.140e-36
Identity = 75/182 (41.21%), Postives = 106/182 (58.24%), Query Frame = 0

Query:   24 SVATTQDFVFNLGGPEPENPVG-GVELRAANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEGDITSAFVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDPGAVTVTTRFFD-LHSKAIQASLN-FEDPQLKALISALPQTPAMARHECLQRCGL 202
            S+   +DFVFN    +    +G G    AA     PAL G  I+MT+  +  C+INLP +HPRATE+ ++ +G   + F +EN G   ++N L KG+V  FP G +H++QNL C PA F+AA N+EDPG  T+ + F   L +  + ASL      Q+K L   LP+ PA+   EC +RCGL
Sbjct:   53 SLLDNKDFVFNFLTSKTGVSMGDGGRTVAATAANFPALIGHNIAMTVGFIGPCSINLPHIHPRATEINFIAQGKFEAGFFEEN-GARFIVNTLHKGEVTVFPMGAIHFEQNLNCEPAVFVAAFNSEDPGVSTIGSNFIGGLPADIVSASLRGLSIEQVKELTKYLPKNPAIGIQECRKRCGL 233

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9449.17478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LDW6_ECTSI	2.160e-88	64.02	Cupin-like protein n=1 Tax=Ectocarpus siliculosus ...	[more]
A0A6H5JV79_9PHAE	5.150e-81	62.09	Cupin type-1 domain-containing protein n=6 Tax=Ect...	[more]
A0A507FDZ0_9FUNG	8.120e-45	46.29	Cupin type-1 domain-containing protein n=2 Tax=Chy...	[more]
A0A836CNU2_9STRA	4.910e-38	42.31	RmlC-like cupin domain-containing protein n=7 Tax=...	[more]
A0A835YZF9_9STRA	8.950e-38	42.31	RmlC-like cupin domain-containing protein n=1 Tax=...	[more]
UPI0020087ADD	9.500e-38	44.00	RmlC-like cupin domain-containing protein n=1 Tax=...	[more]
A0A0G4EA80_VITBC	1.060e-36	39.55	Cupin type-1 domain-containing protein n=2 Tax=Vit...	[more]
A0A0G4FMH1_VITBC	1.980e-36	39.43	Cupin type-1 domain-containing protein n=1 Tax=Vit...	[more]
A0A835Z488_9STRA	2.110e-36	40.98	RmlC-like cupin domain-containing protein n=1 Tax=...	[more]
A0A433DF28_9FUNG	9.140e-36	41.21	RmlC-like cupin n=2 Tax=Jimgerdemannia flammicoron...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 113..133 score: 49.06 coord: 81..101 score: 44.74 coord: 146..161 score: 27.91
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 33..179 e-value: 1.2E-22 score: 91.2
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 33..162 e-value: 2.9E-22 score: 78.9
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 5..185 e-value: 8.2E-43 score: 148.2
None	No IPR available	PANTHER	PTHR31238	FAMILY NOT NAMED	coord: 17..171
None	No IPR available	PANTHER	PTHR31238:SF14	GERMIN-LIKE PROTEIN SUBFAMILY T MEMBER 1-RELATED	coord: 17..171
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..286
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..16
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..19 score: 5.0
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..21 score: 0.596
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 29..187

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9449	contig	S-dermatodea_contig9449:5585..8320 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9449.17478.1	mRNA_S-dermatodea_contig9449.17478.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9449 5244..8387 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9449.17478.1 ID=prot_S-dermatodea_contig9449.17478.1|Name=mRNA_S-dermatodea_contig9449.17478.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=287bp
MKTSCYAAAALVVAGLGACTAEHSVATTQDFVFNLGGPEPENPVGGVELR
AANLGTLPALEGERISMTLVNLDACTINLPRVHPRATEMLYVIEGDITSA
FVKENDGEGAVINELTKGDVAFFPQGLVHYQQNLGCHPATFLAALNNEDP
GAVTVTTRFFDLHSKAIQASLNFEDPQLKALISALPQTPAMARHECLQRC
GLQTHSRSLTSKPSYPSSSDSSSSDSGSSDSGSSDSGSSDSDSSDSDSHS
RSGGSSSDDSSSDDSSSDDSSSDDSSSGGGNKHLRA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001929	Germin
IPR006045	Cupin_1
IPR014710	RmlC-like_jellyroll
IPR011051	RmlC_Cupin_sf