prot_S-dermatodea_contig9420.17452.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9420.17452.1
Unique Nameprot_S-dermatodea_contig9420.17452.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length414
Homology
BLAST of mRNA_S-dermatodea_contig9420.17452.1 vs. uniprot
Match: A0A6H5JQJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQJ8_9PHAE)

HSP 1 Score: 102 bits (253), Expect = 1.140e-19
Identity = 134/400 (33.50%), Postives = 169/400 (42.25%), Query Frame = 0
Query:   50 TRSVSVSAMLERRAEELEAGSKYDEAMKHLLESHAAGSSRAGLLAHELSRRHPE-AFEMKGCPV------HQVGR-----RTPSPTAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAPASTPASDVAADDARSRDQDESEQVVAGLATAVGEATTAEERASSGLRADED---IELPNGDASTEVAAGTTSSIRGHDDTSTALLFPHAAASAAXXXXXXXXXXXXXXXVTTPTSEPASVAPDEDISSVHDIAPAAAPPGRVTAVESTAETPWERGWHGPKDFTPPSDS-----------------AAGKGSAVTXXXXXXXXXXXXXXXXXXXXAAAGTL---RNFTIKQLNAFDGGVQASSKRGGVVKRGKGRPIYIALKGKVFDASAGRDLYGP 414
            T   S +A LE+RAEELEA    D AM+ LL SH  GSSRA  LAHELS+RHP  A     CP+       +VG       +P P A+S XXXXXXXXXXX                    A  ++ AS+V ADD                    G  +  EE     L + E+   + L +G++++  AAG                   A+ SAA                   T+   ++ P + I             G  T   +T   PWERGW G + F PP  S                 AA  G+ ++                     A  T    RNFT++QLNAFDGG  A   RGG  + GK RPIYIALKG+V+DASAGR LYGP
Sbjct:   63 THGCSTAAALEKRAEELEAAGDLDGAMEALLASHDQGSSRAVTLAHELSQRHPVGALGGNRCPLSIRSPRRKVGGGVEAGASPDPEASSAXXXXXXXXXXXAVSVVAPVCA----------AALTSLASEVLADDNND-----------------GVTSVPEEHCKRSLPSGEERRHVTL-SGESASATAAGP------------------ASQSAA-------------------TTATGALEPGKRIDHGG---------GEPT---TTTLLPWERGWQGREGFKPPPSSSALADTGSSASRDAAGTAAAFGAGLSPSSSSFAETGVQSDDALDVGDAEATKLARRNFTVRQLNAFDGGCSAPRMRGGEARAGKQRPIYIALKGEVYDASAGRHLYGP 385          
BLAST of mRNA_S-dermatodea_contig9420.17452.1 vs. uniprot
Match: D7FRN9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRN9_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 5.770e-12
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0
Query:  362 RNFTIKQLNAFDGGVQASSKRGGVVKRGKGRPIYIALKGKVFDASAGRDLYGP 414
            RNFT++QLNAFDGG  A   RGG  +  K RPIYIALKG+V+DASAGR LYGP
Sbjct:   34 RNFTVRQLNAFDGGCSAPRMRGGEARAVKQRPIYIALKGEVYDASAGRHLYGP 86          
BLAST of mRNA_S-dermatodea_contig9420.17452.1 vs. uniprot
Match: A0A7S4NE50_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NE50_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 5.280e-5
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 0
Query:  362 RNFTIKQLNAFDGGVQASSKRGGVVKRGKGRPIYIALKGKVFDASAGRDLYGP 414
            RNFT  QL  FDG            K G+ +P+Y+A+KG VFD S+GRD YGP
Sbjct:   56 RNFTAMQLKHFDGTKDE--------KTGEDKPVYLAVKGIVFDVSSGRDFYGP 100          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9420.17452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JQJ8_9PHAE1.140e-1933.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRN9_ECTSI5.770e-1269.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4NE50_9STRA5.280e-549.06Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036400Cytochrome b5-like heme/steroid binding domain superfamilyGENE3D3.10.120.10coord: 356..414
e-value: 6.9E-6
score: 28.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9420contigS-dermatodea_contig9420:6744..7985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9420.17452.1mRNA_S-dermatodea_contig9420.17452.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9420 6536..7985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9420.17452.1 ID=prot_S-dermatodea_contig9420.17452.1|Name=mRNA_S-dermatodea_contig9420.17452.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=414bp
MEYVMDNAALADGGPAGPFCWIGAGVVLGGWVIARSWCPVAWRSCPKSMT
RSVSVSAMLERRAEELEAGSKYDEAMKHLLESHAAGSSRAGLLAHELSRR
HPEAFEMKGCPVHQVGRRTPSPTAASAAAASAAAASDHDDDHDEDHAAAA
AATATADDAPASTPASDVAADDARSRDQDESEQVVAGLATAVGEATTAEE
RASSGLRADEDIELPNGDASTEVAAGTTSSIRGHDDTSTALLFPHAAASA
APAEAGAATTAAATEEVTTPTSEPASVAPDEDISSVHDIAPAAAPPGRVT
AVESTAETPWERGWHGPKDFTPPSDSAAGKGSAVTTAGGSVQATTPSGGG
SSGDAAAAGTLRNFTIKQLNAFDGGVQASSKRGGVVKRGKGRPIYIALKG
KVFDASAGRDLYGP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036400Cyt_B5-like_heme/steroid_sf