prot_S-dermatodea_contig9387.17429.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9387.17429.1
Unique Nameprot_S-dermatodea_contig9387.17429.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length195
Homology
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: D8LR05_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR05_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 5.130e-16
Identity = 43/88 (48.86%), Postives = 52/88 (59.09%), Query Frame = 0
Query:   20 TLLFHSKFVGGFSSSDYPYCAGTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTCDSTYSYTC---GD--YNCIDPSAYCVDDDDSGDSS 102
            T +F +   G  SS+DYP C G +  I  G C P NNN  C YDGGDCCWC CDST  Y C   GD  YNCIDP   C ++++  + S
Sbjct:   20 TAIFFTGAQGYSSSADYPDCEGFIGRIGTGICTPENNNELCGYDGGDCCWCDCDST-EYPCEEQGDSSYNCIDPETTCKEEEEEEEGS 106          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 5.110e-13
Identity = 35/61 (57.38%), Postives = 41/61 (67.21%), Query Frame = 0
Query:   39 CAGTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTCDSTYSYTCG--DYNCIDPSAYCVDDDD 97
            C G +  + DGDCD +NNN  C YDGGDCC+CTC   + Y CG   + CIDPSA C DDDD
Sbjct:  177 CGGNIVHLADGDCDQINNNEECGYDGGDCCFCTCLDDF-YECGIRGFACIDPSAECADDDD 236          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: A0A8J2SY22_9STRA (Hypothetical protein n=5 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SY22_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.110e-12
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:   39 CAGTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTCDSTYSYTCGDYNCIDP 88
            CAGT ++I DG CD  NNN+ C YDGGDCC  TC S+ SYTCG+Y+C+DP
Sbjct:  926 CAGTPNWIGDGMCDSSNNNAACSYDGGDCCEATCVSSTSYTCGNYDCVDP 975          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: A0A6H5J6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6K0_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 1.590e-11
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   32 SSSDYPYCAGTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTCDSTYSYTCGDYN--CIDPSAYC 92
            + +D+P C G +  I DG CD  NNN  C +DGGDCC CTC+ +Y Y+C  Y+  C DP+A C
Sbjct:  216 AGTDWPECEGYIYMIGDGSCDYYNNNEECGWDGGDCCSCTCEGSYYYSCSSYSMDCQDPNANC 278          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: D7FX77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX77_ECTSI)

HSP 1 Score: 72.0 bits (175), Expect = 2.930e-11
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   32 SSSDYPYCAGTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTCDSTYSYTCGDYN--CIDPSAYC 92
            + +D+P C G +  I DG CD  NNN  CD+DGGDCC CTC+ +  Y+C  Y+  C DP+A C
Sbjct:  217 AGTDWPECEGYIYMIGDGSCDYYNNNEECDWDGGDCCSCTCEGSSYYSCSSYSMDCQDPNANC 279          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: D7G2E3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2E3_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 2.470e-10
Identity = 43/98 (43.88%), Postives = 50/98 (51.02%), Query Frame = 0
Query:    6 QAGNWFKALAAAAATLLFHSKFVGGFSSSDYPYCAGTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTCD---STYSYTCGD---YNCIDPSAYCVDDDD 97
            +A N +  L  AA T L       G+ ++ Y Y  G       G+CDP NN   CDYDGGDCC CTCD    T    C     Y CIDP A CVD+DD
Sbjct:    2 KASNIWLGLLGAAVTTLPTGADTTGYLTTCYDYGIGN------GECDPRNNKEECDYDGGDCCECTCDPSLGTSDDLCKSDSFYACIDPLAPCVDEDD 93          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: A0A6H5KJK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 6.040e-10
Identity = 35/58 (60.34%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   41 GTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTCDSTYSYTCG--DYNCIDPSAYCVDDD 96
            G V+ I DG C   NNN  CDYDGGDCC CTC   + Y CG   + CIDPSA CVDDD
Sbjct:   69 GYVASIGDGFCSDENNNEVCDYDGGDCCECTCVDAF-YPCGYVAFACIDPSAACVDDD 125          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: A0A6H5JVP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVP4_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 7.550e-10
Identity = 34/60 (56.67%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   32 SSSDYPYCAGTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTCDSTYSYTCGDY--NCIDPS 89
            + +D+P C G +  I DG CD  NNN  CD+DGGDCC CTC S Y YTCG Y  +C DPS
Sbjct:  304 AGTDWPECEGYLFEIGDGHCDYYNNNEECDWDGGDCCACTCVSGY-YTCGYYTFDCEDPS 362          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: A0A6H5JYI5_9PHAE (LNR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI5_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.790e-9
Identity = 31/54 (57.41%), Postives = 33/54 (61.11%), Query Frame = 0
Query:   44 SFIEDGDCDPVNNNSYCDYDGGDCCWCTCDSTYSYTCGDYNCIDPSAYCVDDDD 97
            SF  DG C    N   C YDGGDCC CTC+       GDYNCIDP A CV+DDD
Sbjct:  105 SFAGDGKCHEDLNTEVCGYDGGDCCSCTCEPGAFNCGGDYNCIDPEAVCVEDDD 158          
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Match: A0A6H5KN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN00_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.970e-8
Identity = 40/80 (50.00%), Postives = 46/80 (57.50%), Query Frame = 0
Query:   17 AAATLLFHSKFVGGFSSSDYPYCAGTVSFIEDGDCDPVNNNSYCDYDGGDCCWCTC-DSTYSYTCGD---YNCIDPSAYC 92
            A  T+   S    G +SSD   C+   S+I DG CD  NNNS CDYDGGDCC C C D TY   CG    + CIDPS+ C
Sbjct:  110 ALLTVACFSSAQQGTTSSD---CSD--SWISDGMCDSSNNNSNCDYDGGDCCSCDCFDDTYE--CGSVTAFTCIDPSSSC 182          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9387.17429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LR05_ECTSI5.130e-1648.86LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JTT4_9PHAE5.110e-1357.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2SY22_9STRA2.110e-1264.00Hypothetical protein n=5 Tax=Pelagomonas calceolat... [more]
A0A6H5J6K0_9PHAE1.590e-1149.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX77_ECTSI2.930e-1149.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2E3_ECTSI2.470e-1043.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJK5_9PHAE6.040e-1060.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVP4_9PHAE7.550e-1056.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYI5_9PHAE1.790e-957.41LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KN00_9PHAE4.970e-850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000800Notch domainSMARTSM00004NL_2coord: 27..68
e-value: 0.0077
score: 17.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 129..194
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..128
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.637
NoneNo IPR availableTMHMMTMhelixcoord: 7..24
NoneNo IPR availableTMHMMTMhelixcoord: 106..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9387contigS-dermatodea_contig9387:3126..5489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9387.17429.1mRNA_S-dermatodea_contig9387.17429.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9387 3069..7157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9387.17429.1 ID=prot_S-dermatodea_contig9387.17429.1|Name=mRNA_S-dermatodea_contig9387.17429.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=195bp
MTSVWQAGNWFKALAAAAATLLFHSKFVGGFSSSDYPYCAGTVSFIEDGD
CDPVNNNSYCDYDGGDCCWCTCDSTYSYTCGDYNCIDPSAYCVDDDDSGD
SSKLGVIIGVSVGVAALLIIVAAVAYCICSRKSSTAGKTPPALPAGQAGH
PVPAPATVVYPAHAPAPVGYPANASAPVGYPAHAPATAVYQMPM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000800Notch_dom