prot_S-dermatodea_contig9368.17408.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9368.17408.1
Unique Nameprot_S-dermatodea_contig9368.17408.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length615
Homology
BLAST of mRNA_S-dermatodea_contig9368.17408.1 vs. uniprot
Match: D8LIF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF5_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 3.620e-44
Identity = 185/528 (35.04%), Postives = 246/528 (46.59%), Query Frame = 0
Query:    1 LSSKIRAQAGQLADLTERLQQQDAYSRLVETRLLELDPSHALPVTPRHLG--CGVTGKLDQPPNSSTGVGVRRRNDAGTRCSREQIVADDDMRRGYQAAQERLKDAAQLIRQLREALATR---------------------------------DADAKAAADRARKFQREADDLRRKVGLHS-NRPAASEGDACNWRA---EGRAIPGGGE-------GSDF--------------LGREVSRLKKELQGQREAYEIGKAEESRLRAAL-EVCLFHLQQKLCEVRSQELDEGEGEAAVMA-DLANAGSTIDSLRAEVARLLLKPQTLG----------------------------VAAGDNSLRGSRTYPGRAMGVHYKSGEGTG------------------SGIPRGGRVEDVLAEKEALLDYVQDLLAQIKDLEASCASLERESVETSRVLKSLKEELNRPDTNAVLARRDSLQKEQELLEVAELSE--------KKEMERLYDELLKQLGTAEEEKGSLQAQA 412
            L +KIR QA +LA LTERLQ++ AYSRLVE RL+ELDP H+LPVTP HLG     +    +   S  G+G         + S E+   DD +R+GY+AAQ RL+DAAQLIR LREAL +R                                 DADA AAA+RARK+QREADDLRR++     N   AS+G +   R    +  + P GGE       G  F              L ++V RL+++L+ QREA    + E + L   L ++   H    L   R    D+ +  AA +A  LA A         E   L L+ + LG                             +   +S  G       A+G  +    G+                    G  RGG   ++ AEKEALLDYVQDLL +IK LEA+CASLERE  ++S               N    R+D  QKE+ + ++ +L +        K+EM RLY+ELLKQL TAEEEK  LQ ++
Sbjct:    2 LCTKIRNQAKELAALTERLQEEAAYSRLVEKRLVELDPEHSLPVTPHHLGRRSPESTIAHRSSGSVGGLGRGYHLQKADQLSNEEHDHDDGLRQGYEAAQARLRDAAQLIRTLREALESRGEFRGDSHVAARAQPDAIAGVFGTTGLPWMPTWDADANAAANRARKYQREADDLRRRLETSGGNVSRASKGGSGGGRVGENQTSSSPLGGEQGHGRELGIRFVDDDRARQHQQHVELSKDVERLEQKLREQREATTAARTEANGLHETLKQLQQSHHVGNLSSQREGAADDAKANAAELARQLARAXXXXXXXXXENKNLRLQLRELGGXXXXXXXXXXXXXXXXSSHISKTMPRSTSIASSSSGGHAIVAAAALGGRHTPAAGSKPALACELGGTRAANVEEEGGADRGGN--ELEAEKEALLDYVQDLLGRIKGLEAACASLERERGDSS--------------INLEKTRKDLQQKEKAIAQIEDLQKTXXXXXXXKEEMGRLYNELLKQLKTAEEEKEKLQPES 513          
BLAST of mRNA_S-dermatodea_contig9368.17408.1 vs. uniprot
Match: D8LIF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF6_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 7.610e-24
Identity = 69/125 (55.20%), Postives = 86/125 (68.80%), Query Frame = 0
Query:  490 ELKKHQDEKQLCDEALVNERGRTQHLVGALRDAETEVAVGKSRETAAICRAENLGDELHQKEAKVVEQLAFLCEELQKRVAALQSGEELEGVRYQVAEAFDLAERQDELLEDASARLEQLKDESR 614
            ELK+ ++E++  D +L   + RTQHL GALR+ E E A   SRE  A+ RAE L  ELH   +KV E L+  CEELQK V  L+SGEE++G R + AEAF LAERQD+LLED SARL  LK ES+
Sbjct:   14 ELKELREERRERDASLAEGQSRTQHLAGALRELELESAALNSREREAVSRAEGLEQELHXXXSKVSE-LSLRCEELQKHVVVLKSGEEVQGSRRKAAEAFALAERQDQLLEDTSARLGHLKAESK 137          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9368.17408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIF5_ECTSI3.620e-4435.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIF6_ECTSI7.610e-2455.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 426..457
NoneNo IPR availableCOILSCoilCoilcoord: 592..614
NoneNo IPR availableCOILSCoilCoilcoord: 312..353
NoneNo IPR availableCOILSCoilCoilcoord: 477..504
NoneNo IPR availableCOILSCoilCoilcoord: 384..418
NoneNo IPR availableCOILSCoilCoilcoord: 94..114
NoneNo IPR availableCOILSCoilCoilcoord: 122..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9368contigS-dermatodea_contig9368:1920..8221 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9368.17408.1mRNA_S-dermatodea_contig9368.17408.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9368 1920..8221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9368.17408.1 ID=prot_S-dermatodea_contig9368.17408.1|Name=mRNA_S-dermatodea_contig9368.17408.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=615bp
LSSKIRAQAGQLADLTERLQQQDAYSRLVETRLLELDPSHALPVTPRHLG
CGVTGKLDQPPNSSTGVGVRRRNDAGTRCSREQIVADDDMRRGYQAAQER
LKDAAQLIRQLREALATRDADAKAAADRARKFQREADDLRRKVGLHSNRP
AASEGDACNWRAEGRAIPGGGEGSDFLGREVSRLKKELQGQREAYEIGKA
EESRLRAALEVCLFHLQQKLCEVRSQELDEGEGEAAVMADLANAGSTIDS
LRAEVARLLLKPQTLGVAAGDNSLRGSRTYPGRAMGVHYKSGEGTGSGIP
RGGRVEDVLAEKEALLDYVQDLLAQIKDLEASCASLERESVETSRVLKSL
KEELNRPDTNAVLARRDSLQKEQELLEVAELSEKKEMERLYDELLKQLGT
AEEEKGSLQAQARQATKREEAESDTARALREQLDQCLRRLSDAEDRAAER
VRNVEEESLAVKNALSAATSRLAKLDDLEAEAVARAQEEELKKHQDEKQL
CDEALVNERGRTQHLVGALRDAETEVAVGKSRETAAICRAENLGDELHQK
EAKVVEQLAFLCEELQKRVAALQSGEELEGVRYQVAEAFDLAERQDELLE
DASARLEQLKDESR*
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