prot_S-dermatodea_contig9312.17365.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig9312.17365.1
Unique Name	prot_S-dermatodea_contig9312.17365.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	358

Homology

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: D7FR90_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR90_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 7.430e-104
Identity = 213/384 (55.47%), Postives = 252/384 (65.62%), Query Frame = 0

Query:    1 QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEIASLKPGAMGAPDAPSAAPAPVPPGVAMAGDGTAPKRESDGRSAPA-----------------------VAGSAESGTAAAGAESTVQLPLLPVTTVESEEELGEFVAAAGGGRLVVVDFWAEWCKSCRAILPFVHRLPETSEGGVAVATADVDEAPELADAHDVSVLPHFVVFKDGVQVDTYTGSSETELLAKLTRTPGLNALAAVSRRSGETGDGSDSADAFTAGGN-REGDSE-----------------LKAAEALIEAFSANVDVDRLLKDIREHA 343
            +VVVVDGVGYPAVGSICGVSNGDVAAAL APVLLVGKSGVGDAVDSYNLNACFF ARGVRVLGGVFNRIST+GYYSLERCREAV+SYF QA+ +A+PYGFVPEIASLK  A    +  S A     PGV+ A        E++  + P                        V G ++S T   G E+ +    LP T VE E++L  FVA AG  RLV+VDF AEWCK+C+AILP V  LPE  +G VAVATADVD+A ELAD  +V+ +PHF++ K+GVQVDTYTGSSET+LL+KL +   L  + + S      G GS  A   ++G   R G  E                 LKAAEALI+AF  NVDV RLL+DIR++A
Sbjct:  302 KVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTAGYYSLERCREAVTSYFAQANPNALPYGFVPEIASLKHAA----ETGSVA---AKPGVSQA--------EANSTAVPPAXXXXXXXXXXXXXXXXXPGSGMVTGLSDSPTRK-GPEAALVKEKLPATEVEDEQDLQAFVATAGSERLVLVDFGAEWCKNCKAILPLVRNLPERFDGTVAVATADVDKAAELADEREVTTIPHFLLLKNGVQVDTYTGSSETDLLSKLAQH--LPNVGSPSTEPSPAGSGS--AXXXSSGAMIRSGPGEHAKGVNGEDVPGKNFAALKAAEALIDAFDGNVDVARLLRDIRQYA 665

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: A0A6H5JV08_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV08_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 1.020e-101
Identity = 208/383 (54.31%), Postives = 239/383 (62.40%), Query Frame = 0

Query:    1 QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEIASLKPGAMGAPDAPSAAPAPVPPGVAMAGDGTAPKRESDGRSAPAVAGSAESGTAAAGAESTVQLPL--------------LPVTTVESEEELGEFVAAAGGGRLVVVDFWAEWCKSCRAILPFVHRLPETSEGGVAVATADVDEAPELADAHDVSVLPHFVVFKDGVQVDTYTGSSETELLAKLTR---TPGLNALAAVSRRSGETGDGSDSADAFTAGGNR-----------EGDSELKAAEALIEAFSANVDVDRLLKDIREHAGVPASADTLTLP 355
            +VVVVDGVGYPAVGSICGVSNGDVAAAL APVLLVGKSGVGDAVDSYNLNACFF ARGVRVLGGVFNRIST+GYYSLERCREAV+SYF QA+ +A+PYGFVPEIASLK        A +A      PGV+ A   +   R                                             LP T VE E++L  ++A  G  RLV+VDF AEWCK+C+AILP V  LPE  +G VAVATADVD+A ELAD   V+ +PHFV+ K+GVQVDTYTGSSET+LL+KL +     G  A       SG  G GS  A   +  G             E  + LKAAEALI+AF  NVDV RLL+DIR+HA   A  DT + P
Sbjct:  310 KVVVVDGVGYPAVGSICGVSNGDVAAALKAPVLLVGKSGVGDAVDSYNLNACFFEARGVRVLGGVFNRISTTGYYSLERCREAVTSYFAQANPNALPYGFVPEIASLK-------HASAAGSVAAKPGVSQAEANSTAVRPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTARVKEKLPATEVEDEQDLQAYLATTGSERLVLVDFGAEWCKNCKAILPLVRSLPERFDGAVAVATADVDKAAELADERKVTTIPHFVLLKNGVQVDTYTGSSETDLLSKLAQHLPDVGTPATEPSPAGSGPAGTGSSGAMIRSGPGEHVKGVNGEDIPGEKSAALKAAEALIDAFDGNVDVARLLRDIRQHAAE-ACGDTSSNP 684

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: A0A7S3LYH0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LYH0_9STRA)

HSP 1 Score: 145 bits (367), Expect = 2.880e-39
Identity = 71/100 (71.00%), Postives = 82/100 (82.00%), Query Frame = 0

Query:    5 VDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEI 104
            VDGVGYP+VGSIC +SN DVA  LNAPVLLVGKSGVGDAVDSYNLN+ +F  +GVRVLGGVFN++   GYYSL+ C+EAV+ YF+Q     MPYGFVP I
Sbjct:   11 VDGVGYPSVGSICNLSNADVAKKLNAPVLLVGKSGVGDAVDSYNLNSAYFELKGVRVLGGVFNKLPLDGYYSLDNCKEAVTMYFQQFKPHEMPYGFVPTI 110

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: K3WKW6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKW6_GLOUD)

HSP 1 Score: 144 bits (362), Expect = 1.380e-37
Identity = 70/104 (67.31%), Postives = 82/104 (78.85%), Query Frame = 0

Query:    1 QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEI 104
            +VVVVDGVGYPAVGSICGVSN  VA A+ APV+LVGK GVGDAVDS+NLNACFF + GV+V+G +FNR+   GYYSLE C+ +V  YF Q   D   YGF+PEI
Sbjct:  121 KVVVVDGVGYPAVGSICGVSNAAVARAVQAPVVLVGKRGVGDAVDSFNLNACFFESHGVKVIGALFNRLPADGYYSLENCKASVEEYFHQFQPDKAVYGFIPEI 224

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: A0A8K1C6R0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6R0_PYTOL)

HSP 1 Score: 149 bits (375), Expect = 2.690e-37
Identity = 73/107 (68.22%), Postives = 85/107 (79.44%), Query Frame = 0

Query:    1 QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEIASL 107
            +VVVVDGVGYPAVGSICGVSN  VA A+ APV+LVGK GVGDAVDS+NLNACFF ++ V VLG +FNR+   GYYSLE CRE+V+ YFEQ   D   YGF+PE+  L
Sbjct:  234 KVVVVDGVGYPAVGSICGVSNASVAHAVQAPVVLVGKKGVGDAVDSFNLNACFFESQDVAVLGAIFNRLPQDGYYSLENCRESVTRYFEQHQPDKQVYGFIPELVEL 340

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: A0A662XI14_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XI14_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.000e-37
Identity = 73/105 (69.52%), Postives = 86/105 (81.90%), Query Frame = 0

Query:    1 QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEIA 105
            +VVVVDGVGYPAVGSICGVSN  VA A+ APV+LVGK GVGDAVDS+NLNA FF + GV+VLGG+FNR+   G+YSLE CRE V++YFEQ   D   YGF+PE+A
Sbjct:  265 KVVVVDGVGYPAVGSICGVSNASVAKAVQAPVVLVGKKGVGDAVDSFNLNASFFESHGVKVLGGIFNRLPADGFYSLEHCRENVTAYFEQFQPDKRVYGFLPELA 369

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: A0A7S1U9A1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9A1_9STRA)

HSP 1 Score: 146 bits (369), Expect = 4.180e-36
Identity = 72/104 (69.23%), Postives = 86/104 (82.69%), Query Frame = 0

Query:    1 QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEI 104
            ++VVVDGVGYPAVGSICGVSN  +A AL APVLLVGKSGVGDAVDS+NLNA FF  RG+RVLGG+FN++ST GYY++++C EAV SYF Q       YGFVP++
Sbjct:  264 KLVVVDGVGYPAVGSICGVSNAHIAEALGAPVLLVGKSGVGDAVDSFNLNAIFFEHRGLRVLGGIFNKLSTEGYYAVDKCAEAVGSYFRQYRPRQRTYGFVPKV 367

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: A0A836CIE2_9STRA (AAA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIE2_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.010e-35
Identity = 70/101 (69.31%), Postives = 85/101 (84.16%), Query Frame = 0

Query:    3 VVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPE 103
            VVVDGVGYPAVGSICG+SN   AAAL+ PVLLVG+SGVGDAVDS+NLNA FF++ GV VLGGVFNR+++ G+YSL  C+EAV++YF +     MPYGFVP+
Sbjct:  120 VVVDGVGYPAVGSICGISNAHTAAALHTPVLLVGRSGVGDAVDSFNLNATFFKSHGVEVLGGVFNRLASGGFYSLANCQEAVTNYFARVGRQ-MPYGFVPD 219

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: A0A3R7J465_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J465_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.820e-35
Identity = 68/104 (65.38%), Postives = 87/104 (83.65%), Query Frame = 0

Query:    1 QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEI 104
            +VV+VDGVGYPAVGSICGVSN  VA A+ APV+LVGK GVGDAVDS+NLNA FF + GV+VLGG+FNR+ + G+YSLE CRE+V++YF++   +   YGF+PE+
Sbjct:  214 KVVIVDGVGYPAVGSICGVSNAHVAKAVQAPVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPSDGFYSLEHCRESVTAYFDKFQPEKCVYGFLPEL 317

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BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Match: A0A225WPJ8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPJ8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.850e-35
Identity = 69/104 (66.35%), Postives = 85/104 (81.73%), Query Frame = 0

Query:    1 QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLNACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGFVPEI 104
            ++VVVDGVGYPAVGSICGVSN  VA  L  PV+LVGK GVGDAVDS+NLNA FF + GV+VLGG+FNR+   G+YSLE CRE+V++YFEQ  ++   YGF+PE+
Sbjct:  222 KIVVVDGVGYPAVGSICGVSNAHVAGKLETPVVLVGKKGVGDAVDSFNLNATFFESHGVKVLGGIFNRLPEDGFYSLENCRESVTAYFEQFQSEKHVYGFIPEL 325

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig9312.17365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FR90_ECTSI	7.430e-104	55.47	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5JV08_9PHAE	1.020e-101	54.31	Thioredoxin domain-containing protein n=1 Tax=Ecto...	[more]
A0A7S3LYH0_9STRA	2.880e-39	71.00	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
K3WKW6_GLOUD	1.380e-37	67.31	Uncharacterized protein n=1 Tax=Globisporangium ul...	[more]
A0A8K1C6R0_PYTOL	2.690e-37	68.22	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A662XI14_9STRA	8.000e-37	69.52	Uncharacterized protein n=2 Tax=Nothophytophthora ...	[more]
A0A7S1U9A1_9STRA	4.180e-36	69.23	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A836CIE2_9STRA	1.010e-35	69.31	AAA domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A3R7J465_9STRA	1.820e-35	65.38	Uncharacterized protein n=3 Tax=Phytophthora kerno...	[more]
A0A225WPJ8_9STRA	1.850e-35	66.35	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13500	AAA_26	coord: 2..107 e-value: 1.4E-11 score: 44.6
None	No IPR available	GENE3D	3.40.50.300		coord: 1..108 e-value: 3.6E-12 score: 48.0
None	No IPR available	GENE3D	3.40.30.10		coord: 158..279 e-value: 9.0E-25 score: 88.8
None	No IPR available	PANTHER	PTHR21343:SF10		coord: 2..108
None	No IPR available	PANTHER	PTHR21343	DETHIOBIOTIN SYNTHETASE	coord: 2..108
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 186..274 e-value: 7.5E-19 score: 67.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 141..286 score: 12.396
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 173..272
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig9312	contig	S-dermatodea_contig9312:114..3946 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig9312.17365.1	mRNA_S-dermatodea_contig9312.17365.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig9312 114..3946 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig9312.17365.1 ID=prot_S-dermatodea_contig9312.17365.1|Name=mRNA_S-dermatodea_contig9312.17365.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=358bp
QVVVVDGVGYPAVGSICGVSNGDVAAALNAPVLLVGKSGVGDAVDSYNLN
ACFFRARGVRVLGGVFNRISTSGYYSLERCREAVSSYFEQADADAMPYGF
VPEIASLKPGAMGAPDAPSAAPAPVPPGVAMAGDGTAPKRESDGRSAPAV
AGSAESGTAAAGAESTVQLPLLPVTTVESEEELGEFVAAAGGGRLVVVDF
WAEWCKSCRAILPFVHRLPETSEGGVAVATADVDEAPELADAHDVSVLPH
FVVFKDGVQVDTYTGSSETELLAKLTRTPGLNALAAVSRRSGETGDGSDS
ADAFTAGGNREGDSELKAAEALIEAFSANVDVDRLLKDIREHAGVPASAD
TLTLPPPP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013766	Thioredoxin_domain
IPR036249	Thioredoxin-like_sf
IPR027417	P-loop_NTPase