prot_S-dermatodea_contig9303.17360.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9303.17360.1
Unique Nameprot_S-dermatodea_contig9303.17360.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length157
Homology
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BLAST of mRNA_S-dermatodea_contig9303.17360.1 vs. uniprot
Match: A0A6H5JK77_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK77_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 3.740e-18
Identity = 45/68 (66.18%), Postives = 50/68 (73.53%), Query Frame = 0 
Query:    2 LGDRFDVPDLLLPFLTELVASLVFRQARRLVLGYDRRRVKNSDLAWREKAERMRSIPLLHLGVPPEYI 69
            L   FDVPD L+P LT LVA LVFRQARRLV GYDRRRV  +D  W+EKA R+R +PL  LG P EYI
Sbjct:  677 LVKMFDVPDFLVPTLTTLVALLVFRQARRLVFGYDRRRVAKNDEVWQEKARRVRLVPLSELGAPQEYI 744
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BLAST of mRNA_S-dermatodea_contig9303.17360.1 vs. uniprot
Match: D7FS45_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS45_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.330e-11
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 0 
Query:    2 LGDRFDVPDLLLPFLTELVASLVFRQARRLVLGYDRRRVKNSDLAWREKA 51
            L + FDVPD L+P +T LVA LVFRQARRLV GYDRRRV  SD AWREKA
Sbjct:  677 LVNMFDVPDFLVPTMTGLVALLVFRQARRLVFGYDRRRVAKSDEAWREKA 726
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9303.17360.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK77_9PHAE3.740e-1866.18VPS9 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FS45_ECTSI1.330e-1174.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9303contigS-dermatodea_contig9303:6586..8080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9303.17360.1mRNA_S-dermatodea_contig9303.17360.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9303 6586..8080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9303.17360.1 ID=prot_S-dermatodea_contig9303.17360.1|Name=mRNA_S-dermatodea_contig9303.17360.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=157bp
NLGDRFDVPDLLLPFLTELVASLVFRQARRLVLGYDRRRVKNSDLAWREK
AERMRSIPLLHLGVPPEYIPGGSGGGGHDDASAKVASTTGTTSQAVAKDT
ADGSLRGRAEGGKRPRDEEGRGFPSEEEKEEEAAAVQPSERSAEVFFDPF
VVRPNPD
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