prot_S-dermatodea_contig9279.17342.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9279.17342.1
Unique Nameprot_S-dermatodea_contig9279.17342.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length87
Homology
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BLAST of mRNA_S-dermatodea_contig9279.17342.1 vs. uniprot
Match: A0A6H5KRW6_9PHAE (Glutaredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW6_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 1.430e-52
Identity = 76/85 (89.41%), Postives = 79/85 (92.94%), Query Frame = 0 
Query:    1 NDGDQPRLTGFCDWNGCHRNVLGAWNEVKDRFATLPEFSDRCMWNAIVERNISMPGVLMYSKTYCSFCARLKALLRHLNIPFRTE 85
            NDGDQPRLTGFCDW GCHRNVLG WNEVKDRFATLPEFSDR MW AIVERNISMPGVL++SKTYCSFCA+LKALLR L IPFRTE
Sbjct:   17 NDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTE 101
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BLAST of mRNA_S-dermatodea_contig9279.17342.1 vs. uniprot
Match: D8LL87_ECTSI (Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL87_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 7.770e-50
Identity = 76/85 (89.41%), Postives = 79/85 (92.94%), Query Frame = 0 
Query:    1 NDGDQPRLTGFCDWNGCHRNVLGAWNEVKDRFATLPEFSDRCMWNAIVERNISMPGVLMYSKTYCSFCARLKALLRHLNIPFRTE 85
            NDGDQPRLTGFCDW GCHRNVLG WNEVKDRFATLPEFSDR MW AIVERNISMPGVL++SKTYCSFCA+LKALLR L IPFRTE
Sbjct:  270 NDGDQPRLTGFCDWKGCHRNVLGGWNEVKDRFATLPEFSDRTMWTAIVERNISMPGVLVFSKTYCSFCAKLKALLRELRIPFRTE 354
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BLAST of mRNA_S-dermatodea_contig9279.17342.1 vs. uniprot
Match: A0A6U4UCS5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4UCS5_HEMAN)

HSP 1 Score: 54.7 bits (130), Expect = 1.050e-6
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 0 
Query:    1 NDGDQ---PRLTGFCDWNGCHRNVLGAWNEVKDRFATLPEFSDRCMWNAIVERNISMPGVLMYSKTYCSFCARLKALLRHLN 79
            N+GD    P+ T  CD   C       W  +++RFA + E     M   +VER ++   V++++K+YCS+CA++K L + L 
Sbjct:  288 NEGDDKAAPKFTKMCDDKACWLLPGDDWTGIRNRFAPVEELDCAAM---MVERAVTESDVVLFTKSYCSYCAQVKQLFKELQ 366
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BLAST of mRNA_S-dermatodea_contig9279.17342.1 vs. uniprot
Match: L1IS45_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IS45_GUITC)

HSP 1 Score: 50.8 bits (120), Expect = 2.350e-5
Identity = 30/89 (33.71%), Postives = 47/89 (52.81%), Query Frame = 0 
Query:    1 NDGDQ-PRLTGFCDWNGCHRNVLGAWNEVKDRFATLPEFSDRCMWNAIVERNIS-----MPGVLMYSKTYCSFCARLKALLRHLNIPFR 83
            N+ DQ P+L   C+ + C       W+EV  RF  L    DR      ++R++         ++++SK+YCSFC +LK  L+  NIPF+
Sbjct:  278 NESDQEPKLRQICNDHMCKFLNGDDWDEVVSRFGHLHSEMDREEICRQLDRHLGGSSSREDALMIFSKSYCSFCIKLKRALKMANIPFK 366
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9279.17342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KRW6_9PHAE1.430e-5289.41Glutaredoxin domain-containing protein n=1 Tax=Ect... [more]
D8LL87_ECTSI7.770e-5089.41Glutaredoxin n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6U4UCS5_HEMAN1.050e-632.93Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
L1IS45_GUITC2.350e-533.71Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 43..85
e-value: 4.1E-7
score: 32.0
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 57..83
e-value: 2.2E-6
score: 27.8
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 46..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9279contigS-dermatodea_contig9279:6955..8420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9279.17342.1mRNA_S-dermatodea_contig9279.17342.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9279 6955..8420 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9279.17342.1 ID=prot_S-dermatodea_contig9279.17342.1|Name=mRNA_S-dermatodea_contig9279.17342.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=87bp
NDGDQPRLTGFCDWNGCHRNVLGAWNEVKDRFATLPEFSDRCMWNAIVER
NISMPGVLMYSKTYCSFCARLKALLRHLNIPFRTEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002109Glutaredoxin
IPR036249Thioredoxin-like_sf