prot_S-dermatodea_contig92745.17332.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-dermatodea_contig92745.17332.1
Unique Name	prot_S-dermatodea_contig92745.17332.1
Type	polypeptide
Organism	Saccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length	190

Homology

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: A0A1I9LW32_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LW32_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 2.940e-96
Identity = 148/190 (77.89%), Postives = 168/190 (88.42%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDY+TVF    Q S    SFF+    ALN IGILL IGA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSPL+E+SP AL+ ++I+GGMT+F+ ATTALVQNDLKRVIAYSTCSQLGYMVFACG+SNY+VA++HLANHAFFKALLFLGAGSVIHA+  EQD+RK+GGLRR+LPFT
Sbjct:  190 GAVDYSTVFALAPQISSLTLSFFNVEFDALNLIGILLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYSPNALFVISIVGGMTAFFAATTALVQNDLKRVIAYSTCSQLGYMVFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: A0A8F0K255_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0K255_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 5.840e-96
Identity = 147/190 (77.37%), Postives = 167/190 (87.89%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDYATVF    Q S F  SFF+    ALN IGILL +GA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSP++EF P AL  ++++GGMT+F+ ATTALVQNDLKRVIAYSTCSQLGYMVFACG+SNY+VA++HLANHAFFKALLFLGAGSVIHA+  EQD+RK+GGLRR+LPFT
Sbjct:  190 GAVDYATVFALAPQVSSFTISFFNIEFGALNLIGILLFVGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPILEFCPKALMVISVVGGMTAFFAATTALVQNDLKRVIAYSTCSQLGYMVFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: Q2TUE3_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUE3_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 1.160e-95
Identity = 147/190 (77.37%), Postives = 167/190 (87.89%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDYATVF    Q S F   FF+   +ALN IGILL +GA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSPL+E+ P AL  ++I+GGMT+F+ ATTALVQNDLKRVIAYSTCSQLGYMVFACG+SNY+VA++HLANHAFFKALLFLGAGSVIHA+  EQD+RK+GGLRR+LPFT
Sbjct:  190 GAVDYATVFALAPQLSSFTLVFFNLEFEALNLIGILLFVGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYCPKALIVISIVGGMTAFFAATTALVQNDLKRVIAYSTCSQLGYMVFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: A0A3G5FPL7_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Ectocarpales TaxID=2877 RepID=A0A3G5FPL7_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 2.310e-95
Identity = 146/190 (76.84%), Postives = 168/190 (88.42%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDYATVF    Q S  K SFF+    ALN IGILL +GA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+LVRCSPL+E+S  AL+ ++++GG T+F+ ATTALVQNDLKRVIAYSTCSQLGYM+FACG+SNY+VA++HLANHAFFKALLFLGAGSVIHA+  EQD+RK+GGLRR+LPFT
Sbjct:  190 GAVDYATVFALAPQLSLAKLSFFNAEFNALNLIGILLFVGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLVRCSPLLEYSSNALFVISVVGGSTAFFAATTALVQNDLKRVIAYSTCSQLGYMIFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: F8UWN3_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=87 Tax=Phaeophyceae TaxID=2870 RepID=F8UWN3_9PHAE)

HSP 1 Score: 299 bits (765), Expect = 3.250e-95
Identity = 147/190 (77.37%), Postives = 166/190 (87.37%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDYATVF    Q S F  SFF+    ALN IGILL +GA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSPL+E+ P AL  ++I+GGMT+F+ ATTALVQNDLKRVIAYSTCSQLGYMVFACG+SNY+VA++HL NHAFFKALLFLGAGSVIHA+  EQD+RK+GGLRR+LPFT
Sbjct:  190 GAVDYATVFALAPQLSTFSLSFFNVEFGALNFIGILLFVGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYCPEALTVISIVGGMTAFFAATTALVQNDLKRVIAYSTCSQLGYMVFACGLSNYSVAVFHLGNHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: Q94YZ3_PYLLI (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94YZ3_PYLLI)

HSP 1 Score: 298 bits (764), Expect = 4.590e-95
Identity = 145/190 (76.32%), Postives = 167/190 (87.89%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDY+TVF    Q S    SFF+ N  ALN IGILL +GA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSPL+E+   AL+ +TI+GGMT+F+ ATTALVQNDLKRVIAYSTCSQLGYMVFACG+SNY+VA++HLANHAFFKALLFLGAGS+IHA+  EQD+RK+GG+RR+LPFT
Sbjct:  190 GAVDYSTVFALAPQLSECTLSFFNINFNALNLIGILLFVGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYCSNALFIITIIGGMTAFFAATTALVQNDLKRVIAYSTCSQLGYMVFACGLSNYSVAVFHLANHAFFKALLFLGAGSIIHAVGDEQDMRKMGGIRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: A0A8F0FDL8_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0FDL8_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 2.530e-94
Identity = 147/190 (77.37%), Postives = 165/190 (86.84%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GA DYATVF    Q+S    +FF  +I     +GILL IGAAGKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSPL+E+ P AL  VTI+GGMT+F+ ATTALVQNDLKRVIAYSTCSQLGYM+FACG+SNY+VA++HLANHAFFKALLFLGAGSVIHAI  EQDLRK+GGLRR+LPFT
Sbjct:  190 GATDYATVFALAPQFSSLTLNFFGLSINLFTILGILLFIGAAGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYCPQALVVVTIVGGMTAFFAATTALVQNDLKRVIAYSTCSQLGYMIFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAIGDEQDLRKMGGLRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: A0A8F0FDC2_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FDC2_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 3.600e-94
Identity = 144/190 (75.79%), Postives = 166/190 (87.37%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDYATVF    Q S     FF+  ++ALN IG+LL +GA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSPL+E+ P AL + +I+GGMT+F+ AT ALVQNDLKRVIAYSTCSQLGYMVFACG+SNY+VA++HLANHAFFKALLFLGAGSVIHA+  EQD+RK+GGLRR+LPFT
Sbjct:  190 GAVDYATVFALAPQLSSLSLIFFNIELKALNLIGVLLFVGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYCPKALMFTSIVGGMTAFFAATIALVQNDLKRVIAYSTCSQLGYMVFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: A0A8F0K0D6_9PHAE (NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0K0D6_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 3.600e-94
Identity = 145/190 (76.32%), Postives = 166/190 (87.37%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDYATVF    Q S +  +FF+    ALN IGILL IGA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSPL+E+ P A   ++I+GGMT+F+ ATTALVQNDLKRVIAYSTCSQLGYM+FACG+SNY+VA++HLANHAFFKALLFLGAGSVIHA+  EQD+RK+GGLRR+LPFT
Sbjct:  190 GAVDYATVFALAPQLSAYTITFFNIEFGALNLIGILLFIGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYCPKAQIVISIVGGMTAFFAATTALVQNDLKRVIAYSTCSQLGYMIFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFT 379

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BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Match: A0A0U1XC76_SCYLO (NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Ectocarpales TaxID=2877 RepID=A0A0U1XC76_SCYLO)

HSP 1 Score: 294 bits (753), Expect = 2.000e-93
Identity = 142/190 (74.74%), Postives = 166/190 (87.37%), Query Frame = 0

Query:    1 GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGLHTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTILGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHLANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT 190
            GAVDYATVF    Q +     F +++  ALN IG+LL +GA GKSAQ+GLHTWLPDAMEGPTPVSALIHAATMVTAGVF+L RCSPL+E+ P AL+ ++++GGMT+F  ATTALVQNDLKRVIAYSTCSQLGYMVFACG+SNY+VA++HLANHAFFKALLFLGAGSVIHA+  EQD+RK+GGLRR+LPFT
Sbjct:  190 GAVDYATVFALAPQMASTNLPFLNFSFNALNLIGVLLFVGAVGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLARCSPLLEYCPNALFIISVVGGMTAFLAATTALVQNDLKRVIAYSTCSQLGYMVFACGLSNYSVAVFHLANHAFFKALLFLGAGSVIHAVGDEQDMRKMGGLRRLLPFT 379

The following BLAST results are available for this feature:

BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot

BLAST of mRNA_S-dermatodea_contig92745.17332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1I9LW32_9PHAE	2.940e-96	77.89	NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Ple...	[more]
A0A8F0K255_9PHAE	5.840e-96	77.37	NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Lam...	[more]
Q2TUE3_9PHAE	1.160e-95	77.37	NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Des...	[more]
A0A3G5FPL7_9PHAE	2.310e-95	76.84	NADH-ubiquinone oxidoreductase chain 5 n=3 Tax=Ect...	[more]
F8UWN3_9PHAE	3.250e-95	77.37	NADH-ubiquinone oxidoreductase chain 5 n=87 Tax=Ph...	[more]
Q94YZ3_PYLLI	4.590e-95	76.32	NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Pyl...	[more]
A0A8F0FDL8_9PHAE	2.530e-94	77.37	NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Pro...	[more]
A0A8F0FDC2_9PHAE	3.600e-94	75.79	NADH-ubiquinone oxidoreductase chain 5 n=1 Tax=Ana...	[more]
A0A8F0K0D6_9PHAE	3.600e-94	76.32	NADH-ubiquinone oxidoreductase chain 5 n=2 Tax=Cho...	[more]
A0A0U1XC76_SCYLO	2.000e-93	74.74	NADH-ubiquinone oxidoreductase chain 5 n=6 Tax=Ect...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01434	NADHDHGNASE5	coord: 62..88 score: 67.21 coord: 40..61 score: 76.48 coord: 130..142 score: 50.58
None	No IPR available	PANTHER	PTHR42829	FAMILY NOT NAMED	coord: 8..190
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..82
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 94..115
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..21
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 44..63
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 122..142
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 143..153
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 172..190
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 154..171
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 22..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 83..93
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 116..121
None	No IPR available	TMHMM	TMhelix		coord: 21..43
None	No IPR available	TMHMM	TMhelix		coord: 94..116
None	No IPR available	TMHMM	TMhelix		coord: 131..148
None	No IPR available	TMHMM	TMhelix		coord: 63..82
IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	PFAM	PF00361	Proton_antipo_M	coord: 22..190 e-value: 7.6E-56 score: 189.5

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-dermatodea_contig92745	contig	S-dermatodea_contig92745:1..570 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-dermatodea_contig92745.17332.1	mRNA_S-dermatodea_contig92745.17332.1	Saccorhiza dermatodea SderLu1190fm monoicous	mRNA	S-dermatodea_contig92745 1..570 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-dermatodea_contig92745.17332.1 ID=prot_S-dermatodea_contig92745.17332.1|Name=mRNA_S-dermatodea_contig92745.17332.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=190bp
GAVDYATVFFFFSQYSYFKFSFFSYNIQALNTIGILLCIGAAGKSAQIGL
HTWLPDAMEGPTPVSALIHAATMVTAGVFILVRCSPLMEFSPAALYWVTI
LGGMTSFYGATTALVQNDLKRVIAYSTCSQLGYMVFACGVSNYNVAIYHL
ANHAFFKALLFLGAGSVIHAIKGEQDLRKIGGLRRILPFT

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001750	ND/Mrp_mem