prot_S-dermatodea_contig92672.17324.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig92672.17324.1
Unique Nameprot_S-dermatodea_contig92672.17324.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length167
Homology
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: A0A8F0JZP1_9PHAE (Preprotein translocase subunit secY n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZP1_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 2.250e-99
Identity = 159/167 (95.21%), Postives = 163/167 (97.60%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GG N+SFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIES+VTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQI+AM+LALTNQNIL SF IGGIFLLTTIGCVYINEA
Sbjct:   63 FSGGQNSSFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESVVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIKAMALALTNQNILLSFLIGGIFLLTTIGCVYINEA 229          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: A0A0R6LUW4_UNDPI (Protein translocase subunit SecY n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUW4_UNDPI)

HSP 1 Score: 286 bits (732), Expect = 2.510e-93
Identity = 148/167 (88.62%), Postives = 157/167 (94.01%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GG NASFSILSLGILPNINASIIIQLLTTINP LLKLQKEEGEYGRRK+TDYTRYLTF CAIIESIVT YSFR LIFNWN LVL Q+SL+LIAGSMIILWFSELITKDGIGNG+SILICFNIVSNFPDQ+RAM LAL+NQNI+ SFFIGGIFLLTT+GC+YINEA
Sbjct:   63 FSGGENASFSILSLGILPNINASIIIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCAIIESIVTTYSFRPLIFNWNVLVLIQLSLTLIAGSMIILWFSELITKDGIGNGSSILICFNIVSNFPDQLRAMILALSNQNIIISFFIGGIFLLTTVGCIYINEA 229          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: D1J735_ECTSI (Protein translocase subunit SecY n=7 Tax=Ectocarpales TaxID=2877 RepID=D1J735_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 1.540e-89
Identity = 143/167 (85.63%), Postives = 153/167 (91.62%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GGGNASFSILSLGILPNINASIIIQLLTTINP LLKLQKEEGEYGRRK+TDYTRYLTF C+II SIVT YSFRSLIFNWN LVL QISL+L++GSMIILWFSELITK GIGNGTSILICFNIVSNFPDQ+R+M L L+ QNI+ S FI GIFLLTTIGC+YINEA
Sbjct:   64 FSGGGNASFSILSLGILPNINASIIIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRSLIFNWNILVLTQISLTLMSGSMIILWFSELITKKGIGNGTSILICFNIVSNFPDQLRSMILVLSKQNIIISLFISGIFLLTTIGCIYINEA 230          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: A0A8F0JZQ7_9PHAE (Preprotein translocase subunit secY n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZQ7_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 1.710e-88
Identity = 141/167 (84.43%), Postives = 153/167 (91.62%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GG NASFSILSLGILPNINASI+IQLLTTINP LLKLQKEEGEYGRRK+TDYTRYLTF CAIIES++TAYSF+ LIFNWN  +L QIS +LIAGSMIILWFSELITK GIGNG+SILICFNIVSNFPDQ+RA+ LAL+ QNIL SFFI GIFLLTTIGC+YINEA
Sbjct:   63 FSGGSNASFSILSLGILPNINASILIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCAIIESVITAYSFQPLIFNWNVFILIQISSTLIAGSMIILWFSELITKAGIGNGSSILICFNIVSNFPDQLRAIILALSTQNILISFFIAGIFLLTTIGCIYINEA 229          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: D1GJR5_FUCVE (Protein translocase subunit SecY n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR5_FUCVE)

HSP 1 Score: 269 bits (688), Expect = 1.100e-86
Identity = 135/167 (80.84%), Postives = 152/167 (91.02%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GGGNASFSI SLGILPNINASIIIQLLTTINP LLKLQK+EGEYGRRK+ DYTRYLTF CA+IES+VT YSF+ LIFNW+ LV  QI+LSLI G+MIILWFSELITK GIGNG+SILICFNIVSNFPDQ++AM++ L+NQNI  SFF+GGIFL+TTIGC+YINEA
Sbjct:   63 FSGGGNASFSIFSLGILPNINASIIIQLLTTINPTLLKLQKDEGEYGRRKLIDYTRYLTFFCAVIESLVTTYSFKPLIFNWDLLVFTQITLSLITGTMIILWFSELITKYGIGNGSSILICFNIVSNFPDQLKAMAVGLSNQNIFISFFVGGIFLVTTIGCIYINEA 229          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: A0A6B7EV55_9PHAE (Preprotein translocase secY subunit n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV55_9PHAE)

HSP 1 Score: 263 bits (672), Expect = 2.860e-84
Identity = 134/167 (80.24%), Postives = 151/167 (90.42%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GGGNASFSILSLGILPNINASIIIQLLTTI+P+LLKLQKEEGEYGRRK+TDYTRYLTF C+II S+V  YSFR LIFNWN +VL QISL+L+AGSMI+LWFSELITKDGIGNGTSILICFNIVSNFP+Q+ ++   L+ QNIL S FI GIFLLTT+GC+YIN+A
Sbjct:   63 FSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASVVATYSFRPLIFNWNSMVLTQISLTLMAGSMILLWFSELITKDGIGNGTSILICFNIVSNFPEQLGSIFSVLSKQNILISVFISGIFLLTTVGCIYINDA 229          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: A0A141BSM4_9PHAE (Protein translocase subunit SecY n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM4_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 4.460e-83
Identity = 133/167 (79.64%), Postives = 147/167 (88.02%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GGGNASFSILSLGILPNINASI IQLLTTINP LLKLQK EGEYGRRK+ DYTRYLTF  A+IE I+T YSFRSLIFNWN LVL QISLSLI G+MIILWFSELITK GIGNG+SILICFNIVSNFPDQ+R ++L L+N++I   FF+  IFLLTT+GC+YINEA
Sbjct:   62 FSGGGNASFSILSLGILPNINASIFIQLLTTINPTLLKLQKNEGEYGRRKLIDYTRYLTFFFAVIEGIITTYSFRSLIFNWNILVLIQISLSLITGTMIILWFSELITKYGIGNGSSILICFNIVSNFPDQLRTIALNLSNKSIFIGFFVSSIFLLTTVGCIYINEA 228          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: A0A1I9LVB7_9PHAE (Protein translocase subunit SecY n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVB7_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.340e-82
Identity = 132/167 (79.04%), Postives = 147/167 (88.02%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GGGNASFSILSLGILPNINASIIIQL TTINPALLKLQKEEG YGRRK+TDYTRYLT  C+I+ S++  YSFR LIFNWN LVL QISL+LIAGSMIILWFSELITK+GIGNGTSILICFNIVSNFP Q+R++ + L+ QNI  +  I GIFLLTT+GC+YINEA
Sbjct:   64 FSGGGNASFSILSLGILPNINASIIIQLFTTINPALLKLQKEEGGYGRRKLTDYTRYLTLFCSIVASVIATYSFRPLIFNWNILVLTQISLTLIAGSMIILWFSELITKNGIGNGTSILICFNIVSNFPAQLRSIIVVLSKQNIAITILISGIFLLTTVGCIYINEA 230          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: A0A8F0F797_9PHAE (Preprotein translocase subunit secY n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F797_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 1.840e-82
Identity = 129/167 (77.25%), Postives = 148/167 (88.62%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GGG +S  +LSLGILPNINASII+QLLT ++P+LLKLQKEEGEYGRRK+TDYTRYLTF CA++ESIVT YSFRSLIFNWNF+VL QISLSLI GSMIILWFSE+ITKDG+GNG+S+LICFNIVSNFPDQI+AM+L L N N      +GGIFLLTT+GC+ INEA
Sbjct:   63 FSGGGTSSVGLLSLGILPNINASIILQLLTQVSPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALVESIVTTYSFRSLIFNWNFIVLTQISLSLITGSMIILWFSEVITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLVNTNSSIILLLGGIFLLTTVGCICINEA 229          
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Match: A0A8E5XRJ3_9PHAE (Protein translocase subunit SecY n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ3_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 6.770e-82
Identity = 129/167 (77.25%), Postives = 148/167 (88.62%), Query Frame = 0
Query:    1 FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFIGGIFLLTTIGCVYINEA 167
            F GGG ASFSILSLGILP INASIIIQLLTTINP+LLKLQK+EGEYGRRK+TDYTRYLTF CA IES++T YSFRSLIFNWNF  + QISL+L+ GSMIILWFSELITK G+GNG S+LICFNIVSNFP+Q++AM + LTNQN+L +  +  IFLLTT+GC+YINEA
Sbjct:   64 FSGGGTASFSILSLGILPYINASIIIQLLTTINPSLLKLQKDEGEYGRRKLTDYTRYLTFFCAAIESLLTTYSFRSLIFNWNFFSVLQISLTLVTGSMIILWFSELITKKGVGNGASLLICFNIVSNFPNQLKAMIVTLTNQNLLIAILLNVIFLLTTVGCIYINEA 230          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig92672.17324.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0JZP1_9PHAE2.250e-9995.21Preprotein translocase subunit secY n=1 Tax=Desmar... [more]
A0A0R6LUW4_UNDPI2.510e-9388.62Protein translocase subunit SecY n=28 Tax=Laminari... [more]
D1J735_ECTSI1.540e-8985.63Protein translocase subunit SecY n=7 Tax=Ectocarpa... [more]
A0A8F0JZQ7_9PHAE1.710e-8884.43Preprotein translocase subunit secY n=1 Tax=Chorda... [more]
D1GJR5_FUCVE1.100e-8680.84Protein translocase subunit SecY n=3 Tax=Fucaceae ... [more]
A0A6B7EV55_9PHAE2.860e-8480.24Preprotein translocase secY subunit n=1 Tax=Clados... [more]
A0A141BSM4_9PHAE4.460e-8379.64Protein translocase subunit SecY n=14 Tax=Sargassa... [more]
A0A1I9LVB7_9PHAE1.340e-8279.04Protein translocase subunit SecY n=1 Tax=Pleurocla... [more]
A0A8F0F797_9PHAE1.840e-8277.25Preprotein translocase subunit secY n=1 Tax=Protoh... [more]
A0A8E5XRJ3_9PHAE6.770e-8277.25Protein translocase subunit SecY n=1 Tax=Ishige ok... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00303SECYTRNLCASEcoord: 83..108
score: 30.96
coord: 51..74
score: 32.5
coord: 109..132
score: 44.58
coord: 9..29
score: 59.4
NoneNo IPR availablePANTHERPTHR10906:SF2PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTICcoord: 3..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 166..167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..75
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 111..128
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
IPR023201SecY domain superfamilyGENE3D1.10.3370.10coord: 1..167
e-value: 8.9E-46
score: 158.4
IPR023201SecY domain superfamilySUPERFAMILY103491Preprotein translocase SecY subunitcoord: 3..165
IPR002208SecY/SEC61-alpha familyPFAMPF00344SecYcoord: 10..167
e-value: 2.9E-41
score: 141.7
IPR002208SecY/SEC61-alpha familyPANTHERPTHR10906SECY/SEC61-ALPHA FAMILY MEMBERcoord: 3..167
IPR030659SecY conserved sitePROSITEPS00756SECY_2coord: 102..119
IPR030659SecY conserved sitePROSITEPS00755SECY_1coord: 10..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig92672contigS-dermatodea_contig92672:3..503 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig92672.17324.1mRNA_S-dermatodea_contig92672.17324.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig92672 3..503 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig92672.17324.1 ID=prot_S-dermatodea_contig92672.17324.1|Name=mRNA_S-dermatodea_contig92672.17324.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=167bp
FLGGGNASFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRK
ITDYTRYLTFLCAIIESIVTAYSFRSLIFNWNFLVLAQISLSLIAGSMII
LWFSELITKDGIGNGTSILICFNIVSNFPDQIRAMSLALTNQNILFSFFI
GGIFLLTTIGCVYINEA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023201SecY_dom_sf
IPR002208SecY/SEC61-alpha
IPR030659SecY_CS