prot_S-dermatodea_contig9230.17295.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9230.17295.1
Unique Nameprot_S-dermatodea_contig9230.17295.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length296
Homology
BLAST of mRNA_S-dermatodea_contig9230.17295.1 vs. uniprot
Match: D7G1P1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1P1_ECTSI)

HSP 1 Score: 408 bits (1048), Expect = 1.050e-140
Identity = 193/277 (69.68%), Postives = 227/277 (81.95%), Query Frame = 0
Query:    1 MVFNPPALK-DEDKKEEPVVVTISPARSGDAYVEQAKRGAGWVSLLLIGWLFQRLLCEWGLPSDCDLPRDALEVLTDLVTLMAFGLAQAWFCEVLEDRRFRHLTKEAYFGPVYAGMILAVSAIQSSQWFEDMMADSPGDWSESHIIVTVFLVAITIFFVAWHFAEAWRVLPGAYYVSGQVNIHVVIKENLHRIYNVSRGLIVTYALLYAAFAFDEKDGLGQHYVVLAWVLSLLAQFKSKPSIIWLAVCTGVFVQGVGAFRLRFLCATMGNDGNGFGV 276
            MVFNPP LK D D  E+PV VT+SPARSGDAY+EQAKR A W+ LLL+ WLFQRL+C + LP  CDLP DALEVLTDL+ L+ FGL QAWFCEVLE+RRFRHLT+EAYFG V   + L VSAI+++ WF+DM  +   DW +SHI++ V L+   +  VA+HFAEAWR LPGAYYVSG +N+ +VI+ENLHRIYNVSRGLIV+YALLY AFAF+E DGL QHYV+LAWVLSL AQFKSKPSIIWLA+CTGVF+QG G++RLRFLC   GN GNGFGV
Sbjct:    1 MVFNPPVLKQDADDAEKPVKVTVSPARSGDAYIEQAKRAAAWIGLLLLCWLFQRLMCHFNLPPHCDLPSDALEVLTDLLALLVFGLTQAWFCEVLEERRFRHLTREAYFGIVIIVIGLIVSAIETTDWFQDMRFNDNSDWRDSHIVMAVVLITFVLVIVAYHFAEAWRTLPGAYYVSGNINLDIVIEENLHRIYNVSRGLIVSYALLYGAFAFEEGDGLKQHYVLLAWVLSLTAQFKSKPSIIWLALCTGVFIQGFGSYRLRFLCEVFGNYGNGFGV 277          
BLAST of mRNA_S-dermatodea_contig9230.17295.1 vs. uniprot
Match: D8LDF2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF2_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 1.810e-72
Identity = 121/261 (46.36%), Postives = 167/261 (63.98%), Query Frame = 0
Query:    1 MVFNPPALKDEDK---KEEPVVVT--ISPARSGDAYVEQAKRGAGWVSLLLIGWLFQRLLCEWGLPSDCDLPRDALEVLTDLVTLMAFGLAQAWFCEVLEDRRFRHLTKEAYFGPVYAGMILAVSAIQSSQWFEDMMADSPGDWSESHIIVTVFLVAITIFFVAWHFAEAWRVLPGAYYVSGQVNIHVVIKENLHRIYNVSRGLIVTYALLYAAFAFDEKDGLGQHYVVLAWVLSLLAQFKSKPSIIWLAVCTGVFVQGVG 256
            MV+NPP  + ED    K+  V +T  ++P R G AYVEQA R  GW  + ++GWL  RL C  GLP DC+LP + LEVLT L+ L+ F LAQAWFCE++E+RRFR L  + YF  +  G  LA+S +  ++   + + +   D +   + + + L+ +T+  +  HFAEAW+VLPGA+ +SG     V ++E+L  IY  SR LI+ Y +LYAAF+    DG G    +LAWVLSL AQFKS  S+ WLAV TGVF+QG+G
Sbjct:    1 MVYNPPVERGEDGEPIKDGGVALTHPVNPMRRG-AYVEQATRATGWAVMYILGWLLMRLSCYAGLPGDCNLPDEPLEVLTVLLVLLVFSLAQAWFCEIMEERRFRDLASKVYFPLLMVGAALALSGLSRAESLRNSLQEERRDLTTFQVAIFIILLILTVVVLLLHFAEAWKVLPGAHLISGVGVPRVEVREDLLSIYVASRMLILAYFILYAAFSVARDDGWGYQLYLLAWVLSLFAQFKSFISVFWLAVTTGVFLQGIG 260          
BLAST of mRNA_S-dermatodea_contig9230.17295.1 vs. uniprot
Match: D8LDF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDF3_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 7.600e-53
Identity = 101/236 (42.80%), Postives = 135/236 (57.20%), Query Frame = 0
Query:   31 YVEQAKRGAGWVSLLLIGWLFQRLLCEWGLPSDCDLPRDALEVLTDLVTLMAFGLAQAWFCEVLEDRRFRHLTKEAYFGPVYAGMILAVSAIQSSQWFEDMMADSPG-DWSESHIIVTVFLVAI--TIFFVAWHFAEAWRVLPGAYYVSGQVNIHVVIKENLHRIYNVSRGLIVTYALLYAAFAFDEKDGLGQHYVVLAWVLSLLAQFKSKPSIIWLAVCTGVFVQGVGAFRLRFL 263
            Y  Q KR   W +L  + W+ QRL C  GLP  CDL    L+VLTDLV L  F LAQA++CE+L D RF  L K  +   V     + +SA+      E    D+ G D+  S +  T+F+  +   +  VAWHFA AW  LPG   +SG V +    KE+LH IY+ SR +I+ + +L+ +F   E DG      +LAW+LSL+A F    S IWL V TG+F+QG+GA RLRFL
Sbjct:    4 YEGQNKRALIWAALYFLAWILQRLWCHLGLPDHCDLAMRPLDVLTDLVVLFTFSLAQAYWCEILLDDRFEELKKAPWIFGVILITPIIISALGRIGGLERWDKDNEGKDFEFSALRSTIFVFGLIAAVLLVAWHFARAWLTLPGMQLLSGGVKVEPP-KEDLHGIYSSSRIVIIAWCILFTSFIISEDDGFDYRGALLAWMLSLIAVFPHPVSYIWLGVNTGIFLQGIGANRLRFL 238          
BLAST of mRNA_S-dermatodea_contig9230.17295.1 vs. uniprot
Match: A0A6H5JMR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR1_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.090e-38
Identity = 82/237 (34.60%), Postives = 126/237 (53.16%), Query Frame = 0
Query:   33 EQAKRGAGWVSLLLIGWLFQRLLCEWGLPSDCDLPRDALEVLTDLVTLMAFGLAQAWFCEVLEDRRFRHLTKEAYFGPVYAGMILAVSAIQSSQWFEDMMADSPGDWSESHIIVTVFLVAITIFFVAWHFAEAWRVLPGAYYVSGQVNIHVVIK------ENLHRIYNVSRGLIVTYALLYAAFAFDEKDGLGQHYVVLAWVLSLLAQFKSKPSIIWLAVCTGVFVQGVGAFRLRFL 263
            EQ  + A WV   +  +      CE G+P +C    DA++VLT+L  L  F    A+ C +L   R+  L+K+ YF  +     LA SA+ ++  FE +  D  GD S +   +++ L+ +     A+H+  AW+ LPG +   G V+  V         EN +  Y  S  +I+ Y +L++AFA+   D    HYV+LAW++SL+A F    S+ WL + TGVF+QGVGA+  R L
Sbjct:   42 EQGVKAASWVGFYIFLYALMAASCEVGVPENCTRATDAMDVLTELPFLFVFA---AFMCGILNGTRYHALSKKMYFPVLVIASGLATSALMNNDGFEGLH-DPGGDLSPAEAALSIILLILVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMLYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 274          
BLAST of mRNA_S-dermatodea_contig9230.17295.1 vs. uniprot
Match: D7G1N8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1N8_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 1.490e-19
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 0
Query:  134 DSPGDWSESHIIVTVFLVAITIFFVAWHFAEAWRVLPGAYYVSGQVNIHVVIK------ENLHRIYNVSRGLIVTYALLYAAFAFDEKDGLGQHYVVLAWVLSLLAQFKSKPSIIWLAVCTGVFVQGVGAFRLRFL 263
            D  G+ S +   +++ L+ +     A+H+  AW+ LPG +   G V+  V         EN +  Y  S  +I+ Y +L++AFA+   D    HYV+LAW++SL+A F    S+ WL + TGVF+QGVGA+  R L
Sbjct:   11 DPGGELSPAEAALSIILLVLVALVFAYHYFLAWKFLPGGWLGWGMVSGQVAEPPPPSRAENRYLQYMASITVIMVYIVLFSAFAYSRGDEWDYHYVLLAWLMSLIAAFDDYISVAWLGITTGVFLQGVGAYSFRVL 146          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9230.17295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G1P1_ECTSI1.050e-14069.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDF2_ECTSI1.810e-7246.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDF3_ECTSI7.600e-5342.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JMR1_9PHAE3.090e-3834.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1N8_ECTSI1.490e-1936.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..94
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..241
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 164..194
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..260
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 125..143
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 62..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 41..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 261..295
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 218..235
NoneNo IPR availableTMHMMTMhelixcoord: 241..263
NoneNo IPR availableTMHMMTMhelixcoord: 193..212
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 143..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9230contigS-dermatodea_contig9230:1732..7101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9230.17295.1mRNA_S-dermatodea_contig9230.17295.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9230 1172..7279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9230.17295.1 ID=prot_S-dermatodea_contig9230.17295.1|Name=mRNA_S-dermatodea_contig9230.17295.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=296bp
MVFNPPALKDEDKKEEPVVVTISPARSGDAYVEQAKRGAGWVSLLLIGWL
FQRLLCEWGLPSDCDLPRDALEVLTDLVTLMAFGLAQAWFCEVLEDRRFR
HLTKEAYFGPVYAGMILAVSAIQSSQWFEDMMADSPGDWSESHIIVTVFL
VAITIFFVAWHFAEAWRVLPGAYYVSGQVNIHVVIKENLHRIYNVSRGLI
VTYALLYAAFAFDEKDGLGQHYVVLAWVLSLLAQFKSKPSIIWLAVCTGV
FVQGVGAFRLRFLCATMGNDGNGFGVDGDEFRNDDRGNGDDDSQG*
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