prot_S-dermatodea_contig919.17253.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig919.17253.1
Unique Nameprot_S-dermatodea_contig919.17253.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length657
Homology
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BLAST of mRNA_S-dermatodea_contig919.17253.1 vs. uniprot
Match: D7FUJ6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ6_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 9.970e-6
Identity = 24/39 (61.54%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    1 MVDVCCKRCAYNGCRKVPSYGTEGSKKAECCSEHKRVGM 39
            MVDV  KRC + GC K PSYG +GSKKAE C++H   GM
Sbjct:    1 MVDVVSKRCGHPGCTKRPSYGNDGSKKAELCAQHALQGM 39
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig919.17253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUJ6_ECTSI9.970e-661.54EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig919contigS-dermatodea_contig919:11391..22143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig919.17253.1mRNA_S-dermatodea_contig919.17253.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig919 11304..23345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig919.17253.1 ID=prot_S-dermatodea_contig919.17253.1|Name=mRNA_S-dermatodea_contig919.17253.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=657bp
MVDVCCKRCAYNGCRKVPSYGTEGSKKAECCSEHKRVGMVDVRTQRCAHT
RCSKQPSYGTEGSRKTEFCNEHKRAGMVNVRRRRCAYHGCPNQPSYGTEG
SRKTEFCREHKRVGMVDVKSKRCAYKGCPKIPSYATKGSRKTEFCSEHKR
AGMVTVMGKRCAYHGCSKQPSYGREGSRKTEFCSEHKKVGMVDVKTKPCA
YHGCSKQPSYGTEGTRKTEFCREHKRVGMVDVRTKRCAYNGCSKFPSYAT
KGSRKTEFCSEHKRAGMVDVRTNRCAYNGCPKIPSFGTEGNKESNFCSEH
KRAGLTDSSNERCTSEGCVKYAVYGPDGSRRQRLLCSRHFTEGHHAGASV
VEAANERIEAKDIGGETCVQVSLPNARKRSLRVGCFTRQVQKTPGSVDCG
PTRGKRMRVPDREKRGVSQEEQQVSALIREWSQTPSPTGFTPLASHSSSD
QFRVTQNLRRDERATSQTHMRSMRSGCGKGGVPDLAPESCRAAVNPAPLM
PAQGVIHTDTGERQVTGSTRTTGSGDGALGYGGGAERVEAGGRDALITPC
CAGGERYVSTTSSQGRRHTRASCAFIREDRCKIAPLEQVKREAVVEAHPR
KSVDTIAPGPVDVVGKEGEMDDKIAMCELKTEGAGEEAVSPMVSQDMSTV
AVKIEG*
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