prot_S-dermatodea_contig9189.17252.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9189.17252.1
Unique Nameprot_S-dermatodea_contig9189.17252.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length517
Homology
BLAST of mRNA_S-dermatodea_contig9189.17252.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE)

HSP 1 Score: 537 bits (1383), Expect = 1.340e-168
Identity = 344/460 (74.78%), Postives = 367/460 (79.78%), Query Frame = 0
Query:   59 IQAAEHETRLLACAVPALRLLRHCLGRLSDAGAQPPVGPLDAVGALLDFEAALAMLPLD-PPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASWDQEATPQVGLALRAEALVLSSCRLWCPPRPWSKLRDGSMRLSGGGAGSGGGFLHRVSAHALACPANHVSGVRLLAALLPPESPAPLHRLALPVATAXXXXXXXXXXXXXXXXXXXXAFGAGGAASLGRLVGRVHTAAALERSEGLRRQAVAALERRVGDVLGGWDVCIAGDLFPSKDADAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRPALAANPFLAVTAPEVVNAPAVVVSLCHSASPALRRRVLDLAIRAVDVGPMTARALCAALVRSLIGCIERYIGQSQPLGGRSEKDRDVSWEPVCRVLAVMLAVADKPRSAAGRVGLLLGGAIEALMPCLGLPKPEVIRSALEV 517
            ++AAEHE RLL CA+PALRLLRHCLGRLSDAGA+PPVGPLDAVGALLDFEAALAMLPLD PPS                               SWD  ATP V LALRAEALVLSSCRLWCPPRPWS+LR    R SGGG  S   FLHRVSAHALACPANH+SG RLL ALLPPESPAPLHRL LPVATA XXXXXXXXXXXXXXX        GG  S+GRLVGRVHTAAALE+SEGLRRQAVAALERRV ++L GWDVC+AGDLFPSK+ADAA          XXXXXXXXXXXXXXXXXXXXXXX     WRP+L  NP LAVTAP VVN PAVV+SLCHSASP L  RVL+LA RAV +GPMTARALCAALVRSLIGCIERY+GQS+PL GRS+KDR+VSWE VCRVLAV+LAV+D PRS AGRVGLL+GGAIEALMPCLGLPKPEVIRSALEV
Sbjct: 1412 LEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDGKPSPSREE---------------SWDFGATPSVALALRAEALVLSSCRLWCPPRPWSRLR----RNSGGGGSSS--FLHRVSAHALACPANHMSGARLLTALLPPESPAPLHRLVLPVATAAXXXXXXXXXXXXXXXTSD-----GG--SVGRLVGRVHTAAALEKSEGLRRQAVAALERRVREMLEGWDVCVAGDLFPSKEADAAEAGPDGDGGGXXXXXXXXXXXXXXXXXXXXXXXG----WRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVSIGPMTARALCAALVRSLIGCIERYVGQSKPLDGRSDKDREVSWESVCRVLAVILAVSDNPRSGAGRVGLLIGGAIEALMPCLGLPKPEVIRSALEV 1839          
BLAST of mRNA_S-dermatodea_contig9189.17252.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI)

HSP 1 Score: 511 bits (1316), Expect = 9.480e-160
Identity = 318/460 (69.13%), Postives = 341/460 (74.13%), Query Frame = 0
Query:   59 IQAAEHETRLLACAVPALRLLRHCLGRLSDAGAQPPVGPLDAVGALLDFEAALAMLPLD-PPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASWDQEATPQVGLALRAEALVLSSCRLWCPPRPWSKLRDGSMRLSGGGAGSGGGFLHRVSAHALACPANHVSGVRLLAALLPPESPAPLHRLALPVATAXXXXXXXXXXXXXXXXXXXXAFGAGGAASLGRLVGRVHTAAALERSEGLRRQAVAALERRVGDVLGGWDVCIAGDLFPSKDADAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRPALAANPFLAVTAPEVVNAPAVVVSLCHSASPALRRRVLDLAIRAVDVGPMTARALCAALVRSLIGCIERYIGQSQPLGGRSEKDRDVSWEPVCRVLAVMLAVADKPRSAAGRVGLLLGGAIEALMPCLGLPKPEVIRSALEV 517
            ++AAEHE RLL CA+PALRLLRHCLGRLSDAGA+PPVGPLDAVGALLDFEAALAMLPLD PPS                               SWD  ATP V LALRAEALVLSSCRLWCPPRPWS+LR      +G        FLHRVSAHALACPANH+SG RLL ALLPPESPA LHRL LPVATAXXXXXXXXXXXXXXXXX       GG  S+GRLVGRVHTAAALE+SEG RRQAVAALERRV ++L  WDVC+AGDLFP K+A AA                           XXXXXXX    WRP+L  NP LAVTAP VVN PAVV+SLCHSASP L  RVL+LA RAV +GPMTARALCA+LVRSLIGCIERY+GQSQPL GRS+KDR+VSWE VCRVL V+LAV+D P S AGRVGLLLGG IEALMPCLGLPKPEVIRSALEV
Sbjct: 1328 LEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDVKPSPSRGE---------------SWDLGATPSVALALRAEALVLSSCRLWCPPRPWSRLRR-----NGXXXXXXXSFLHRVSAHALACPANHMSGARLLTALLPPESPAALHRLVLPVATAXXXXXXXXXXXXXXXXXSD-----GG--SVGRLVGRVHTAAALEQSEGFRRQAVAALERRVREMLKRWDVCVAGDLFPLKEAAAAEAGPDVDGGGAGEEGTGDKSGNGAFDGXXXXXXX----WRPSLETNPVLAVTAPGVVNVPAVVLSLCHSASPVLHGRVLELARRAVGIGPMTARALCASLVRSLIGCIERYMGQSQPLDGRSDKDREVSWESVCRVLTVILAVSDNPHSGAGRVGLLLGGVIEALMPCLGLPKPEVIRSALEV 1756          
BLAST of mRNA_S-dermatodea_contig9189.17252.1 vs. uniprot
Match: A0A835ZHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHG1_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.050e-29
Identity = 156/509 (30.65%), Postives = 203/509 (39.88%), Query Frame = 0
Query:   52 LDRARTDIQAAEHETRLLACAVPALRLLRHCLGRLSDAGAQPPVGPLDAV-GALLDFEAALAMLPLDPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASWDQEATPQVGLALRAEALVLSSCRLWCPPR--------------------PWSKLRDGS---MRLSG----------------GGAGSGGGFLHRVSAHALACPANHVSGVRLLAALLPPESPAPLHRLALPVATAXXXXXXXXXXXXXXXXXXXXAFGAGGAASLGRLVGRVHTAAALERSEGLRRQAVAALERRVGDVLGGWDVCIAGDLFPSKDADAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWRPALAANPFLAVTAPEVVNAPAVVVSLCHSASPALRRRVLDLAIRAVDVGPMTARALCAALVRSLIGCIERYIGQSQPLGGRSEKDRD-----VSWEPVCRVLAVMLAVADKPRSAAGRVGLLLGGAIEALMPCLGLPKPEVIRSAL 515
            L  A     AA H  ++L   V  LRLLR  L R+   G        DAV  A+LD +AA+A LPL   +                                    ATP   LALRAE+L++  CRLW PP                       +  +DGS   M + G                  A +    +  +  HALA PA+H+  +RLL ALLPP  P PLHRL   +                                   L  RV  AAA+ER +GLR  A+  +ER +   L  WD+ +      +  A A+   XXXXXXXXXXX                           A +     A+TA           ++CHS+SP +R    D+A RA   G  TAR + AAL+  L  C++ Y+                      W PVCR L  + A+AD    AA RV LLL GA+ AL+PCLGLP+PE IR+AL
Sbjct: 1153 LSPAERQAVAARHTRQVLGALVACLRLLRLLL-RVLPRGGDDDAQLRDAVMAAILDGQAAIACLPLATAAADTTLPEGCT--------------------------ATPTTVLALRAESLIVGVCRLWLPPHCCDASDXXXXXXXXXXXXXXXEAHHQDGSASPMAVDGEHIEAAVADADGDEAESSAVTAASTMQLIYKHALAAPAHHLGALRLLHALLPPAVPPPLHRLPASLPERD------------------------------ELAARVRLAAAVERKDGLREAALDEVERHMAWHLHCWDLALTPAAAAASVAAASADGXXXXXXXXXXXGAPR-----------------------ASSDGSIGALTA-----------AMCHSSSPQVRALAADVAARAAGAGAATARGVTAALLADLQRCVDTYLAGPAAXXXXXXXXXXXXXXAAPWLPVCRALQAVHALADADGGAA-RVALLLQGALAALLPCLGLPRPEPIRAAL 1569          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9189.17252.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JNJ9_9PHAE1.340e-16874.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBI8_ECTSI9.480e-16069.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZHG1_9STRA6.050e-2930.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 45..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9189contigS-dermatodea_contig9189:2073..8123 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9189.17252.1mRNA_S-dermatodea_contig9189.17252.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9189 2073..8123 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9189.17252.1 ID=prot_S-dermatodea_contig9189.17252.1|Name=mRNA_S-dermatodea_contig9189.17252.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=517bp
LRLDPAGCPPPPPPPPPPPPPPPGGPPSSPPPLPPPPPLCSAPPSNILGE
NLDRARTDIQAAEHETRLLACAVPALRLLRHCLGRLSDAGAQPPVGPLDA
VGALLDFEAALAMLPLDPPSSPPPGNDRSSGGGSNGTTNSNSTSNASSAA
ASWDQEATPQVGLALRAEALVLSSCRLWCPPRPWSKLRDGSMRLSGGGAG
SGGGFLHRVSAHALACPANHVSGVRLLAALLPPESPAPLHRLALPVATAA
AAAAGVAAAAAADAGGGGSAFGAGGAASLGRLVGRVHTAAALERSEGLRR
QAVAALERRVGDVLGGWDVCIAGDLFPSKDADAARGKGRDGDGDGGQDGG
DAQADASDGAGGGGGRGGGGGGWRPALAANPFLAVTAPEVVNAPAVVVSL
CHSASPALRRRVLDLAIRAVDVGPMTARALCAALVRSLIGCIERYIGQSQ
PLGGRSEKDRDVSWEPVCRVLAVMLAVADKPRSAAGRVGLLLGGAIEALM
PCLGLPKPEVIRSALEV
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