prot_S-dermatodea_contig9176.17239.1 (polypeptide) Saccorhiza dermatodea SderLu1190fm monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-dermatodea_contig9176.17239.1
Unique Nameprot_S-dermatodea_contig9176.17239.1
Typepolypeptide
OrganismSaccorhiza dermatodea SderLu1190fm monoicous (Saccorhiza dermatodea SderLu1190fm monoicous)
Sequence length229
Homology
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: D7G0X2_ECTSI (HDAC_interact domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X2_ECTSI)

HSP 1 Score: 405 bits (1040), Expect = 2.520e-129
Identity = 198/223 (88.79%), Postives = 212/223 (95.07%), Query Frame = 0
Query:    1 MWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEIKANENTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADILHR 223
            MW+NTPLNELDLT SEKGGPSYRHLPKNFPLLSCSERT+LEQSVLND+WVSVPVGSEGGGSDVAFKH+RKN HEDLLFKCEDERFELDMVIEAGSSA+ LL+PM+EEIK  + TAGARYQFK+DRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKT+PVIL RLRQKD+EWRVSRERLNKLWS+VQR TYYKSLDRRS D+KNEDKKAHS+R LVADI HR
Sbjct:  320 MWTNTPLNELDLTLSEKGGPSYRHLPKNFPLLSCSERTSLEQSVLNDLWVSVPVGSEGGGSDVAFKHMRKNQHEDLLFKCEDERFELDMVIEAGSSAISLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDVKNEDKKAHSARVLVADITHR 542          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A7S3XWL9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWL9_HETAK)

HSP 1 Score: 232 bits (591), Expect = 9.550e-72
Identity = 122/231 (52.81%), Postives = 158/231 (68.40%), Query Frame = 0
Query:    1 MWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEIKANENTAGAR-----YQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADILHRCAE 226
            +W + PL+E+D  +  K  PSYR LPK++    CSER+ LE  VLND WVSVPVGSE    + +FKH+RKN +E+ LF+CEDERFE+DMVI++ ++A   L+P+  E++A +   G R      Q+K+D+R LS V L AI RIYGDHGAEILELL+KNP   IPVIL RL+QKD EWR +R+ LNK W  VQ   ++KSLD RS   K  DKK  S R LV ++  R A+
Sbjct:   65 LWYSMPLSEIDFGQCRKCTPSYRALPKDYLRPPCSERSLLEHRVLNDTWVSVPVGSE---DNYSFKHMRKNQYEEALFRCEDERFEVDMVIDSNAAAAAALEPLAREVRALQAAEGTRGGERRLQYKLDKRALSVVHLNAIIRIYGDHGAEILELLKKNPAGAIPVILKRLKQKDAEWRKARQDLNKHWKEVQEKNWHKSLDHRSFYFKQADKKQCSQRALVQEVKERRAD 292          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A6H5KFU2_9PHAE (Sin3a_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU2_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 8.830e-68
Identity = 118/137 (86.13%), Postives = 127/137 (92.70%), Query Frame = 0
Query:   89 MVIEAGSSAMKLLDPMDEEIKANENTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADILHRCA 225
            MVIEAGSSA+ LL+PM+EEIK  + TAGARYQFK+DRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKT+PVIL RLRQKD+EWRVSRERLNKLWS+VQR TYYKSLDRRS DLKNEDKKAHS+R LVADI HR A
Sbjct:    1 MVIEAGSSAINLLEPMEEEIKCIDKTAGARYQFKLDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTVPVILARLRQKDVEWRVSRERLNKLWSNVQRSTYYKSLDRRSIDLKNEDKKAHSARVLVADITHRRA 137          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A7S1UGB0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGB0_9STRA)

HSP 1 Score: 211 bits (536), Expect = 6.500e-64
Identity = 111/239 (46.44%), Postives = 157/239 (65.69%), Query Frame = 0
Query:    2 WSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEIKA-------NENTAGAR-----YQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADILHRCAERV 228
            W    ++++D T+  +  PSYR LP+ FP   CS R+T +  VLND WVS+PVGSE    + +FKH+R+N +E+ LFKCEDERFE+DMVI++ +S +++L+P+  EI+A          TAG       +Q+K+D R LS V + AI+RIYG+HGAEI ELLRKNP   +PV+L RL+QKD+EWR +R+ L + W  +    ++KSLD RS   + +DK+A S R L  DI+     RV
Sbjct:   99 WYGMAVSDVDFTQCRRCTPSYRALPQYFPRPPCSMRSTDDGKVLNDQWVSLPVGSE---ENYSFKHMRRNTYEETLFKCEDERFEMDMVIDSNASTIRVLEPLAAEIEALRVAEGDGGETAGIAGAVPAFQYKLDPRTLSRVHINAISRIYGEHGAEIQELLRKNPAGAVPVVLNRLKQKDIEWRRARQELARQWKGLMEANFHKSLDHRSFYFRTQDKRAISIRGLTQDIIEAHEARV 334          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A835ZD67_9STRA (HDAC_interact domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD67_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.040e-62
Identity = 124/268 (46.27%), Postives = 166/268 (61.94%), Query Frame = 0
Query:    1 MWSNTPLNELDLTKSEKGGPSYRHLPK--------------------NFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEI-KANENTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQK--------------------DLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADILHRCAER 227
            +W +TPL E+D ++  K  PSYR LPK                    ++P  SCSER+ +E SVLND WVSVPVGSE   +   FKH+RKN +E+ LF+CEDERFE+DMVI++ +S +KLL+P+ EEI +  ++ + A YQFK+D+R L  V L AITRIYGD GAE+LELLRKNP   +P+IL RL+QK                    D EWR +R  L++ W  +   TY+KSLDRRS   K+ D++A+  R L+A+I    A R
Sbjct:  636 VWYSTPLAEIDFSQCRKCTPSYRALPKGASQFGWAQFCGTFRASQALDYPRPSCSERSYMEDSVLNDTWVSVPVGSEDSSN---FKHMRKNQYEEALFRCEDERFEIDMVIDSTTSTIKLLEPLAEEIAQLAQHGSNAHYQFKLDKRTLGVVHLNAITRIYGDRGAEVLELLRKNPAGAVPLILKRLKQKXXXXXXXXXXXXXXXXXXXKDTEWRQNRSSLDRQWRDLLERTYHKSLDRRSFYFKSADRRAYGHRALLAEIRDLAAAR 900          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A7S3HNY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNY2_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.520e-60
Identity = 112/244 (45.90%), Postives = 151/244 (61.89%), Query Frame = 0
Query:    1 MWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEIK-----------------ANENTAGA-------RYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADI 220
            +W   PL+E+D  +  K  PSYR LP+++P   C+ER+  E  VLND WVS+P+GSE      +FKH+RKN +E+ LFKCEDERFE+DMVI++    +++L+P+ EEI                  A   T G        R+ F++++R LS + L +I RIYGDHG EILELLR+NP  TIPV+L RL+QKDLEWR +R  LNK W  V    + +S D RS   +  DKK  S+R LV +I
Sbjct:  192 VWYAVPLSEIDFAQCRKCTPSYRALPRDYPKAKCTERSEEEAKVLNDQWVSIPIGSE---ESYSFKHMRKNQYEEALFKCEDERFEIDMVIDSNMCTIRVLEPLAEEIATLKSIETIPRGTLHGDAATGQTQGGASTSIAPRFSFQLEKRHLSTIHLNSIARIYGDHGEEILELLRRNPAGTIPVLLKRLKQKDLEWRKARTELNKHWREVVEKNHTRSFDHRSFYFRQHDKKYLSTRQLVTEI 432          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A7S2R625_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R625_9STRA)

HSP 1 Score: 210 bits (534), Expect = 1.820e-59
Identity = 112/226 (49.56%), Postives = 152/226 (67.26%), Query Frame = 0
Query:    2 WSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEIKANENTAGA------RYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADIL 221
            W++ P+ ELDL++  +  PSYR LP N+P L C+ R+ +EQSVL+D WVSVP+GSE    D AFKHVRKN  E+ LFKCED RFE+DMVIE   +A+++L P+ +EI   + +A +      R QF++D+R LS V  AAI R+YGDHG +IL LL+KNP   IPVI  RL QK  EWR  R+ LN+ W  +    + K+LDR+    K  D+KA S++ LV +I+
Sbjct:  397 WASLPVAELDLSQCARCTPSYRALPDNYPKLQCTLRSPMEQSVLSDKWVSVPMGSE---EDFAFKHVRKNQFEEELFKCEDHRFEIDMVIETNLAAIRVLQPLVDEISELKLSASSNGLPLSRCQFRLDQRGLSTVHFAAIARVYGDHGDDILALLQKNPIGAIPVIHRRLEQKHHEWRKVRQELNRQWRPILEQNFMKALDRQRDTFKQRDRKACSTQQLVNEIM 619          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A7S4IGZ1_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IGZ1_9STRA)

HSP 1 Score: 209 bits (533), Expect = 4.500e-59
Identity = 105/242 (43.39%), Postives = 158/242 (65.29%), Query Frame = 0
Query:    2 WSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEIKANENT------------------AGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADILHRCA 225
            W + PL+E+D ++  +  PSYR LP+++P   CSER+ +E +VLNDVWVS+PVGSE       F+H+RKN +E++LF+ EDERFE+DMVI++ ++ ++ L+P+ EEI+    +                  AG  +Q+ +D R+L+ +   +I+RIYGD G E+L LL KNP   +P+++ RLRQKD ++R +RE LN+ W  +    YYKSLD RS   +  DK+A S+RTL+A+I  R A
Sbjct:  211 WHSVPLSEIDFSRCRRCSPSYRALPRDYPAPPCSERSVVETAVLNDVWVSLPVGSE---ESYTFRHMRKNQYEEMLFRTEDERFEIDMVIDSNAATLRRLEPIAEEIEVLSKSELHTPGLDKGISAPKAGLAGKSFQYSLDCRILNTIHKNSISRIYGDSGPEMLSLLSKNPAIAVPIVVKRLRQKDHDFRAAREVLNRRWREIALVNYYKSLDHRSLTWRTTDKRATSTRTLIAEIKDRAA 449          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A7S2R5Z2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5Z2_9STRA)

HSP 1 Score: 210 bits (534), Expect = 6.620e-59
Identity = 112/226 (49.56%), Postives = 152/226 (67.26%), Query Frame = 0
Query:    2 WSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEIKANENTAGA------RYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADIL 221
            W++ P+ ELDL++  +  PSYR LP N+P L C+ R+ +EQSVL+D WVSVP+GSE    D AFKHVRKN  E+ LFKCED RFE+DMVIE   +A+++L P+ +EI   + +A +      R QF++D+R LS V  AAI R+YGDHG +IL LL+KNP   IPVI  RL QK  EWR  R+ LN+ W  +    + K+LDR+    K  D+KA S++ LV +I+
Sbjct:  397 WASLPVAELDLSQCARCTPSYRALPDNYPKLQCTLRSPMEQSVLSDKWVSVPMGSE---EDFAFKHVRKNQFEEELFKCEDHRFEIDMVIETNLAAIRVLQPLVDEISELKLSASSNGLPLSRCQFRLDQRGLSTVHFAAIARVYGDHGDDILALLQKNPIGAIPVIHRRLEQKHHEWRKVRQELNRQWRPILEQNFMKALDRQRDTFKQRDRKACSTQQLVNEIM 619          
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Match: A0A7S3MGY4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGY4_9STRA)

HSP 1 Score: 209 bits (531), Expect = 1.540e-58
Identity = 112/244 (45.90%), Postives = 151/244 (61.89%), Query Frame = 0
Query:    1 MWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWVSVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKLLDPMDEEIK-----------------ANENTAGA-------RYQFKMDRRVLSPVQLAAITRIYGDHGAEILELLRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRSADLKNEDKKAHSSRTLVADI 220
            +W   PL+E+D  +  K  PSYR LP+++P   C+ER+  E  VLND WVS+P+GSE      +FKH+RKN +E+ LFKCEDERFE+DMVI++    +++L+P+ EEI                  A   T G        R+ F++++R LS + L +I RIYGDHG EILELLR+NP  TIPV+L RL+QKDLEWR +R  LNK W  V    + +S D RS   +  DKK  S+R LV +I
Sbjct:  293 VWYAVPLSEIDFAQCRKCTPSYRALPRDYPKAKCTERSEEEAKVLNDQWVSIPIGSE---ESYSFKHMRKNQYEEALFKCEDERFEIDMVIDSNMCTIRVLEPLAEEIATLKSIETIPRGTLHGDAATGQTQGGASTSIAPRFSFQLEKRHLSTIHLNSIARIYGDHGEEILELLRRNPAGTIPVLLKRLKQKDLEWRKARTELNKHWREVVEKNHTRSFDHRSFYFRQHDKKYLSTRQLVTEI 533          
The following BLAST results are available for this feature:
BLAST of mRNA_S-dermatodea_contig9176.17239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0X2_ECTSI2.520e-12988.79HDAC_interact domain-containing protein n=1 Tax=Ec... [more]
A0A7S3XWL9_HETAK9.550e-7252.81Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5KFU2_9PHAE8.830e-6886.13Sin3a_C domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S1UGB0_9STRA6.500e-6446.44Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835ZD67_9STRA2.040e-6246.27HDAC_interact domain-containing protein n=1 Tax=Tr... [more]
A0A7S3HNY2_9STRA1.520e-6045.90Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S2R625_9STRA1.820e-5949.56Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S4IGZ1_9STRA4.500e-5943.39Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2R5Z2_9STRA6.620e-5949.56Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3MGY4_9STRA1.540e-5845.90Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013194Histone deacetylase interacting domainSMARTSM00761hdac_interact2seq4bcoord: 14..118
e-value: 4.8E-41
score: 152.4
IPR013194Histone deacetylase interacting domainPFAMPF08295Sin3_corepresscoord: 18..112
e-value: 1.2E-31
score: 108.7
IPR039774Transcriptional regulatory protein Sin3-likePANTHERPTHR12346SIN3B-RELATEDcoord: 2..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-dermatodea_contig9176contigS-dermatodea_contig9176:2951..7880 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Saccorhiza dermatodea SderLu1190fm monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-dermatodea_contig9176.17239.1mRNA_S-dermatodea_contig9176.17239.1Saccorhiza dermatodea SderLu1190fm monoicousmRNAS-dermatodea_contig9176 2951..7880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-dermatodea_contig9176.17239.1 ID=prot_S-dermatodea_contig9176.17239.1|Name=mRNA_S-dermatodea_contig9176.17239.1|organism=Saccorhiza dermatodea SderLu1190fm monoicous|type=polypeptide|length=229bp
MWSNTPLNELDLTKSEKGGPSYRHLPKNFPLLSCSERTTLEQSVLNDVWV
SVPVGSEGGGSDVAFKHVRKNAHEDLLFKCEDERFELDMVIEAGSSAMKL
LDPMDEEIKANENTAGARYQFKMDRRVLSPVQLAAITRIYGDHGAEILEL
LRKNPCKTIPVILTRLRQKDLEWRVSRERLNKLWSSVQRGTYYKSLDRRS
ADLKNEDKKAHSSRTLVADILHRCAERV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013194HDAC_interact_dom
IPR039774Sin3-like